DY305476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_OLIPU (Cytochrome c biogenesis protein ccsA OS=Olimarabidopsis pumila GN=ccsA PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.650e-86 Identity = 167/255 (65.49%), Postives = 185/255 (72.55%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKR--KNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + F K QNHL+AITAPSA F QGFATSG L KM QS ILVPALQ QWLMMHVSMM+LGY LVITFRKV F K+ K V +N F F + Y+NE+ ++ L N +RNYYRYQ+IQQLD WS+RIISLGFIFLT GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLH +TN G+NSAIVAS+GFL+IWICYFGVNLLGIGLHSYGSF Sbjct: 71 SNLYESLIFLSWAFSIIHMVSYFNKKQQNHLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTFWKKNIKKNVLLNELFSFDVLYYINERNSILLQQNINFSFSRNYYRYQLIQQLDYWSFRIISLGFIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRGINSAIVASIGFLLIWICYFGVNLLGIGLHSYGSF 325
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_OENPA (Cytochrome c biogenesis protein ccsA OS=Oenothera parviflora GN=ccsA PE=3 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 2.156e-86 Identity = 163/253 (64.43%), Postives = 186/253 (73.52%), Query Frame = -1 Query: 72 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN*H 824 S+LYE IH K ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK ++F K+K F+ SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITWT+F IYLHTRTN ++ VNSAIVA +GF+IIWICYFGVNLLGIGLHSYGSFN H Sbjct: 69 SNLYESLLFLSWSFAIIHMFPYLKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKARKIFSKKKAFL--KDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTMFAIYLHTRTNPNFQSVNSAIVAFLGFIIIWICYFGVNLLGIGLHSYGSFNLH 319
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_RANMC (Cytochrome c biogenesis protein ccsA OS=Ranunculus macranthus GN=ccsA PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 3.677e-86 Identity = 162/248 (65.32%), Postives = 180/248 (72.58%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE + I F+N +++L+ +TAP FTQGFATSG L ++HQS ILVPALQ QWLMMHVSMMVL Y LVI FRK F K K + G FSEIQY+NEKKN+FL S RNY+RYQ+IQQLD WS R+ISLGF+FLT GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLHTRTN + NSAIVAS+GF IIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLMFLSWSFSIFYMIPYFRNKKSNLNVLTAPGTIFTQGFATSGVLREIHQSTILVPALQSQWLMMHVSMMVLSYAALLCGSLLSVALLVILFRKSSFTFSKYKGYYLPIGPLYFSEIQYVNEKKNIFL---SFRNYHRYQLIQQLDCWSSRVISLGFLFLTIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKSLQSSNSAIVASIGFFIIWICYFGVNLLGIGLHSYGSF 313
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_JASNU (Cytochrome c biogenesis protein ccsA OS=Jasminum nudiflorum GN=ccsA PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 3.677e-86 Identity = 159/257 (61.87%), Postives = 182/257 (70.82%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS---------LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH++ FK NQ LS I PSA FTQ FATSG LT++H+S ILVPALQ +WL+MHVSMM+LGY LVI RK + F +NGSF F EI+YM+E+ NV N+ S +NYYR Q IQQLD WSYR+ISLGF+FLT GILSGAVWANEAWGSYW+WDPKETWAFITW +F I+LH RTN KW+G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SNLYESLMFLSWSLSLIHRVPYFKKNQKFLSTIIGPSAIFTQAFATSGLLTEIHESTILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVIAVRKNKKSFFTSNPLFKLNGSFFFGEIEYMDERINVLQNTPNTSFFSTFFSTKNYYRSQFIQQLDYWSYRVISLGFLFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWIVFAIFLHIRTNVKWKGTNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 325
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_PHAAO (Cytochrome c biogenesis protein ccsA OS=Phalaenopsis aphrodite subsp. formosana GN=ccsA PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.825e-85 Identity = 158/252 (62.70%), Postives = 183/252 (72.62%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEG--VNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH I +N +N L+AITAPSA FTQGFATSG T+MHQ ILVPALQ QWLMMHVSMM+L Y +VITF+K FLK KNF + SF F ++Y+NEK ++ + LS +N+Y+YQ+IQ LD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLHTR N+K + NSA VAS+GFL+IWICYFG+NLLGIG HSYGSF Sbjct: 69 SNLYESLIFLSWSLSIIHIILYIRNYKNDLNAITAPSAIFTQGFATSGLSTEMHQPAILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALIVITFQKKTDFFLKNKNFYSLRKSFFFGNMEYLNEKGSILKKTSLLSFKNFYKYQLIQHLDSWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRKNSKLQDQVTNSAFVASIGFLLIWICYFGINLLGIGFHSYGSF 320
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_LACSA (Cytochrome c biogenesis protein ccsA OS=Lactuca sativa GN=ccsA PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.825e-85 Identity = 158/250 (63.20%), Postives = 185/250 (74.00%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH + FK +N+L+ ITA S FTQGFATSG LT++ + ILVPALQ +WL+MHVSMM+L Y LVITFRK+ + K NF+ +N SF F EIQY NE+ N+ + LSA+NYY+ Q+IQQLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYW+WDPKETWAFITW +F IYLH RTN ++G NSAIVA++GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSLIHIVPYFKIRKNYLTEITASSTIFTQGFATSGLLTEIRKPTILVPALQSEWLIMHVSMMILSYAALLCGSLLSVALLVITFRKIFYSY-KSNNFLKLNESFSFGEIQYKNERNNILKKNYFLSAKNYYKAQLIQQLDYWSYRVISLGFIFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWIVFAIYLHIRTNKNFQGANSAIVATLGFLIIWICYFGVNLLGIGLHSYGSF 317
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CAPBU (Cytochrome c biogenesis protein ccsA OS=Capsella bursa-pastoris GN=ccsA PE=3 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 4.065e-85 Identity = 166/256 (64.84%), Postives = 185/256 (72.27%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKR---KNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + F K QNHL+AITAPSA F QGFATSG L KM QS ILVPALQ QWLMMHVSMM+LGY LVITFRKV F K+ K F+ +N F F + Y+NE+ ++ L N +RNYYRYQ+IQQLD WS+RIISLGFIFLT GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLH +TN +NSAIVAS+GFL+IWICYFGVNLLGIGLHSYGSF Sbjct: 71 SNLYESLIFLSWSFSIIHMVSYFNKKQQNHLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTFWKKNIKKKFL-LNELFSFDVLYYINERNSILLQQNINFSFSRNYYRYQLIQQLDFWSFRIISLGFIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRDINSAIVASIGFLLIWICYFGVNLLGIGLHSYGSF 325
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_BARVE (Cytochrome c biogenesis protein ccsA OS=Barbarea verna GN=ccsA PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 5.309e-85 Identity = 165/256 (64.45%), Postives = 185/256 (72.27%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKR---KNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + F K +NHL+AITAPSA F QGFATSG L KM QS ILVPALQ QWLMMHVSMM+LGY LVITFRKV F K+ K F+ +N F F Y+NE+ ++ L N +RNYYRYQ+I+QLD WS+RIISLGFIFLT GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLH +TN G+NSAIVAS+GFL+IWICYFGVNLLGIGLHSYGSF Sbjct: 71 SNLYESLIFLSWAFSIIHMVSYFNKKKKNHLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTFWKKNIKKKFL-LNELFSFDVFYYINERNSILLQQNINFSFSRNYYRYQLIEQLDYWSFRIISLGFIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRGINSAIVASIGFLLIWICYFGVNLLGIGLHSYGSF 325
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_LEPVR (Cytochrome c biogenesis protein ccsA OS=Lepidium virginicum GN=ccsA PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 6.934e-85 Identity = 163/255 (63.92%), Postives = 184/255 (72.16%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKR--KNFVHVNGSFCFSEIQYMNEKKNVFLNSLS----ARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + F K ++NHL+AITAPSA F QGFATSG L KM QS ILVPALQ QWLMMHVSMM+LGY LVITFRKV F K+ K +N F F + Y+NE+ ++ L S +RNYYRYQ+I+QLD WS+RIIS GFIFLT GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLH +TN G+NSAIVAS+GFL+IWICYFGVNLLGIGLHSYGSF Sbjct: 71 SNLYESLIFLSWAFSIIHMVSYFNKKHKNHLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVRPTFWKKNIKTKFLLNELFSFDVLYYINERNSILLQQNSNFSFSRNYYRYQLIEQLDFWSFRIISFGFIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRGINSAIVASIGFLLIWICYFGVNLLGIGLHSYGSF 325
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_FAGEA (Cytochrome c biogenesis protein ccsA OS=Fagopyrum esculentum subsp. ancestrale GN=ccsA PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 1.183e-84 Identity = 165/250 (66.00%), Postives = 183/250 (73.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH I FKN + LSAITAP A FTQGFATSGF T+M QS ILVPALQ QWLMMHVSMM+L Y LVITF+ I LF KRK + +N S +IQY+NEK N+ + S N+YRYQ+I+QLDRWS R+ISLGF+FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF IYLH +TN + NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFYIIHMIPYFKNKK--LSAITAPGAIFTQGFATSGFFTQMKQSTILVPALQSQWLMMHVSMMILAYAALLCGSLLSVALLVITFQNNISLFGKRK--LLLNESLFIDKIQYVNEKNNILQGTYLFSLINFYRYQLIEQLDRWSSRVISLGFLFLTMGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHIKTNINLKSENSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 314 The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bpback to top |