DY305476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SACHY (Cytochrome c biogenesis protein ccsA OS=Saccharum hybrid GN=ccsA PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 4.207e-82 Identity = 151/250 (60.40%), Postives = 177/250 (70.80%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y L+I FR F +KN + +F FSEI+Y+ K++ N+ NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRNSFDFFSLKKNVLRK--TFFFSEIEYLYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_HORVU (Cytochrome c biogenesis protein ccsA OS=Hordeum vulgare GN=ccsA PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 4.207e-82 Identity = 152/250 (60.80%), Postives = 178/250 (71.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y L+I FR F K+K V +N +F FSEI + K++ ++ S NYY+YQ+ ++LD WSYRIISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA++AS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWALYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAAILIIRFRNNFHFFSKKKKNV-LNKTFFFSEIAFFYAKRSALKSAPVPSFPNYYKYQLTERLDSWSYRIISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALIASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_PHAVU (Cytochrome c biogenesis protein ccsA OS=Phaseolus vulgaris GN=ccsA PE=3 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 5.494e-82 Identity = 156/256 (60.94%), Postives = 179/256 (69.92%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNH-LSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMN--EKKNV-----FLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE + + K +N+ + I PS FTQGFATSG LT+MHQS ILVPALQ WLMMHVSMM+LGY LVITF+++I + K K F N + F+EI+YMN +KKN+ F++ S NYYRYQ IQQLDRW YR ISLGFIFLT G +SGAVWANEAWGSYWNWDPKETWAFITW IF IYLH R N K E +NS+IVASMGFLIIWICY G+NLLGIGLHSYGSF Sbjct: 70 SNLYESLIFLSWTFSIFYMVLCLKKKKNYYFNTIITPSILFTQGFATSGLLTEMHQSLILVPALQSHWLMMHVSMMILGYTTLLCGSLLSVAILVITFQELIHMIGKSKTFFFFNETLSFAEIKYMNMNDKKNLLQKTPFMSDSSYINYYRYQFIQQLDRWGYRTISLGFIFLTVGNISGAVWANEAWGSYWNWDPKETWAFITWIIFAIYLHIRKNKKLEYLNSSIVASMGFLIIWICYLGINLLGIGLHSYGSF 325
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_NICTO (Cytochrome c biogenesis protein ccsA OS=Nicotiana tomentosiformis GN=ccsA PE=3 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 5.494e-82 Identity = 162/248 (65.32%), Postives = 176/248 (70.97%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH I FK N LS I PSA FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F+ N SF E N +N + SA+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F IYLHTRTN G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSLIHIIPYFKKNVLILSKIIGPSAIFTQGFATSGILTEIHQSVILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRQLFYKSNGFL--NESFFLGE----NVLQNTYF--FSAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 308
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_ILLOL (Cytochrome c biogenesis protein ccsA OS=Illicium oligandrum GN=ccsA PE=3 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 1.288e-81 Identity = 156/250 (62.40%), Postives = 178/250 (71.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 +DLYE I + FKN++NH S ITAPSA TQ FATSG T++HQS ILVPALQ WLMMHVSMM+L Y LVITFRK I + + + F F EI+Y+NEK+++ N+ L RNY+RYQ+ Q+LD WSYR+I LGF F T GILSGAVWANEAWGSYWNWDPKETWAFITWTI IY HTRTN +G+NSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 NDLYESLMFLSWSFSLILMVPYFKNHKNHFSTITAPSAICTQSFATSGLSTEIHQSEILVPALQSHWLMMHVSMMLLSYAALLCGSLLSIALLVITFRKNIDMIGFTNHLLI--WPFSFGEIKYLNEKRSLLKNTSFLLFRNYHRYQLTQRLDHWSYRVIGLGFTFSTIGILSGAVWANEAWGSYWNWDPKETWAFITWTISAIYSHTRTNKSLQGMNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 316 HSP 2 Score: 24.2534 bits (51), Expect = 1.288e-81 Identity = 12/33 (36.36%), Postives = 15/33 (45.45%), Query Frame = -2 Query: 815 SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 913 SSE+GM AT FC FP+ +Y Sbjct: 40 SSEKGMIATFFCITGLLVTRWIYSGHFPLNDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_WHEAT (Cytochrome c biogenesis protein ccsA OS=Triticum aestivum GN=ccsA PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.599e-81 Identity = 149/250 (59.60%), Postives = 178/250 (71.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y L+I FR F K+K V +N +F FS+I+Y K++ + S NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWG+YWNWDPKETWAFITWTIF IYLH+RT+ W+G NSA++AS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 69 SNLYESLISLSWALYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLGGPPLSAAILIIRFRNNFHFFSKKKKNV-LNKTFLFSDIKYFYAKRSALKRTSVPSFPNYYKYQLTERLDSWSYRVISLGFTLLTGGILGGAVWANEAWGAYWNWDPKETWAFITWTIFAIYLHSRTHPNWKGTNSALIASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SORBI (Cytochrome c biogenesis protein ccsA OS=Sorghum bicolor GN=ccsA PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.599e-81 Identity = 151/250 (60.40%), Postives = 176/250 (70.40%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y L+I FR F +KN +F FSEI+Y+ K++ N+ NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRNSFDFFSLKKNVFLK--TFFFSEIEYLYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_COFAR (Cytochrome c biogenesis protein ccsA OS=Coffea arabica GN=ccsA PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.599e-81 Identity = 160/250 (64.00%), Postives = 182/250 (72.80%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + FK N+ +LS IT S FTQGF TSG LT++ QS ILVPALQ +WL+MHV+MM+LGY LVITFRK ++ L R N + +N SF F EI+YMNE+ N+ N+ SA+NYYR Q+IQQLD WS R ISLGFIFLT GILSGAVWANEAWGSYWNWDPKETWAFITW IF IYLHTRT + NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 70 SNLYESLIFLSWSFSLIHIVPYFKKNKKYLSTITGSSVVFTQGFTTSGLLTEIDQSSILVPALQSEWLIMHVTMMILGYASLLCGSLLSIALLVITFRKNKKI-LYRNNLL-LNESFFFVEIEYMNERSNLLQNTSFFSAKNYYRSQLIQQLDYWSSRGISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIIFAIYLHTRTTRNPKCANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 317
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_BRADI (Cytochrome c biogenesis protein ccsA OS=Brachypodium distachyon GN=ccsA PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.599e-81 Identity = 150/250 (60.00%), Postives = 178/250 (71.20%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y L+I FR F K+ V + +F FS+++Y K++ F ++ S NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWALYILHTIPKVQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAAILIIRFRNNFNFFSKKNKNV-LKKTFLFSKMEYFYAKRSYFKSASVPSFPNYYKYQLTERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNQNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 317
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_MAIZE (Cytochrome c biogenesis protein ccsA OS=Zea mays GN=ccsA PE=3 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 2.727e-81 Identity = 151/250 (60.40%), Postives = 176/250 (70.40%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y L+I FRK F +KN +F FSEI+Y+ K++ N+ NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+R N W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRKNFDFFSLKKNVFLK--TFFFSEIEYLYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNPNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 316 The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bpback to top |