DY305476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SOLTU (Cytochrome c biogenesis protein ccsA OS=Solanum tuberosum GN=ccsA PE=3 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 4.651e-81 Identity = 162/250 (64.80%), Postives = 175/250 (70.00%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH I FK N LS IT PSA TQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F+ N SF E NV N+ A+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F IYLHTRTN G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAILTQGFATSGILTEIHQSGILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRKLFYKSNGFL--NESFFLGE--------NVVENTSFFCAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGPNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 308
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SOLBU (Cytochrome c biogenesis protein ccsA OS=Solanum bulbocastanum GN=ccsA PE=3 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 4.651e-81 Identity = 162/250 (64.80%), Postives = 175/250 (70.00%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH I FK N LS IT PSA TQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F+ N SF E NV N+ A+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F IYLHTRTN G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAILTQGFATSGILTEIHQSGILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRKLFYKSNGFL--NESFFLGE--------NVVENTSFFCAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGPNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 308
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_PIPCE (Cytochrome c biogenesis protein ccsA OS=Piper cenocladum GN=ccsA PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 1.353e-80 Identity = 154/250 (61.60%), Postives = 175/250 (70.00%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH N+QN LS ITA A + Q FATSG L +MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK I + K F + SF SE++ + +KK+ N LS +NY++YQ QQLD WSYRII+LGF LT GILSGAVWANEAWGSYWNWDPKETWAFITWTIF YLHTRTN + G++SAIVAS+GFLIIWICYFGVNLLGIGLHSYG+F Sbjct: 69 SNLYESLMFLSWGFSTIHIFSKIWNHQNDLSTITATGAIYCQAFATSGILNEMHQSAILVPALQSQWLMMHVSMMLLSYGALLCGSLLSVSLLVITFRKNIEILEKMNQFSFLIESFLLSEVRPLKKKKSFLQNISFLSFKNYHKYQFTQQLDHWSYRIINLGFTLLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFATYLHTRTNQRMPGMHSAIVASIGFLIIWICYFGVNLLGIGLHSYGAF 318
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_LOBMA (Cytochrome c biogenesis protein ccsA OS=Lobularia maritima GN=ccsA PE=3 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 3.015e-80 Identity = 161/256 (62.89%), Postives = 184/256 (71.88%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKR---KNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + F K + +L+AITAPSA F QGFA SG L M QS ILVPALQ QWLMMHVSMM+LGY LVITFRKV FLK+ K F+ +N F F + Y+NEK ++ L N +RNYYRYQ+I+QLD S+RIISLGFIFLT GILSGAVWANE WGSYWNWDPKETWAFITWTIF IYLH +TN +G+NSAIVA++GFL+IWICYFGVNLLGIGLHSYGSF Sbjct: 71 SNLYESLIFLAWAFSIIHMVSYFNKKKKKNLNAITAPSAIFIQGFAASGLLN-MPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTFLKKNLKKKFL-LNELFSFDVLYYINEKNSILLQQNINFSFSRNYYRYQLIEQLDFLSFRIISLGFIFLTIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVKGINSAIVAAIGFLLIWICYFGVNLLGIGLHSYGSF 324
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_SOLLC (Cytochrome c biogenesis protein ccsA OS=Solanum lycopersicum GN=ccsA PE=3 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 3.937e-80 Identity = 161/250 (64.40%), Postives = 174/250 (69.60%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH I FK N LS IT PSA TQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F+ N SF E NV N+ +NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNWDPKETWAFITW +F IYLHTRTN G NSAIVAS+GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAILTQGFATSGILTEIHQSGILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRKLFSKSNVFL--NESFFLGE--------NVVENTSFFCTKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWIVFAIYLHTRTNRNLRGPNSAIVASIGFLIIWICYFGVNLLGIGLHSYGSF 308
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_AGRST (Cytochrome c biogenesis protein ccsA OS=Agrostis stolonifera GN=ccsA PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 1.146e-79 Identity = 149/248 (60.08%), Postives = 173/248 (69.76%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y L+I FR F K+K V ++ +F FS+ Y + S NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWANEAWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWALYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAAILIIRFRNNFHFFSKKKKNV-LHKTFLFSDF-YAKRSALKSTSVPSFPNYYKYQLTERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNQNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 314
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_IPOPU (Cytochrome c biogenesis protein ccsA OS=Ipomoea purpurea GN=ccsA PE=3 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 2.006e-79 Identity = 156/252 (61.90%), Postives = 178/252 (70.63%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSA----IVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDLYE IH I F N LS I +PSA FTQGFATSG LT++HQS ILVPAL+ +WL+MHVSMM+LGY LVITFRK +LF +F+ SF F E + +K + F SA+NYYR Q IQQLD WSYR+ISLGF+FLT GILSGAVWANEAWGSYW+WDPKETWAFITW +F I+LHTRTN + VNSA IVAS+GFLIIWICYFGVNL+GIGLHSYGSF Sbjct: 69 SDLYESFIFLSWSFALIHIIPYFTKNTKFLSKIISPSAIFTQGFATSGLLTEIHQSSILVPALKSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNGKLFSGGNDFL--TESFLFGENLF--QKTSFF----SAKNYYRTQFIQQLDFWSYRVISLGFLFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWIVFAIFLHTRTNLNLQSVNSAIVASIVASIGFLIIWICYFGVNLVGIGLHSYGSF 312 HSP 2 Score: 28.1054 bits (61), Expect = 2.006e-79 Identity = 17/51 (33.33%), Postives = 25/51 (49.02%), Query Frame = -2 Query: 815 ISIYLIPFY-SMIQRAIASSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 964 ++I+LI F I++ SSE+GM T FC E FP+ +Y Sbjct: 22 MTIHLIIFLVDEIRKLYDSSEKGMLVTFFCITGLLATHWISSEHFPLSDLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_PELHO (Cytochrome c biogenesis protein ccsA OS=Pelargonium hortorum GN=ccsA PE=3 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 4.452e-79 Identity = 150/250 (60.00%), Postives = 177/250 (70.80%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE I+ + KN +NHL IT+PS F QGFATSG LT++H+ +ILVPALQ QWLMMHVSMM+L Y LVITFRK + KR F++ FS IQY+NE++ + L + + NYYR ++QQ D WSYRIIS+GF+FLT GILSGAVWANEAWGSYW+WDPKETWAFITWTIF IYLH R EGV SAIVAS+GFLIIWICYFG+N+LGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWNFSIINMLPYLKNLKNHLREITSPSTLFIQGFATSGLLTQIHEQKILVPALQSQWLMMHVSMMILSYASLLCGSLLSIALLVITFRKSRSVVGKRNKFLNR----IFSNIQYINEREKILLKTSFTYSINYYRSHLLQQFDFWSYRIISIGFLFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWTIFAIYLHIREKKNAEGVKSAIVASIGFLIIWICYFGINILGIGLHSYGSF 314 HSP 2 Score: 23.0978 bits (48), Expect = 4.452e-79 Identity = 11/33 (33.33%), Postives = 14/33 (42.42%), Query Frame = -2 Query: 815 SSERGMTATAFCXXXXXXXXXXXLETFPIXVIY 913 SSE+GM T FC FP+ +Y Sbjct: 40 SSEKGMIVTLFCITGFLIIRWIYSGHFPLSNLY 72
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_LOLPR (Cytochrome c biogenesis protein ccsA OS=Lolium perenne GN=ccsA PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 5.686e-79 Identity = 148/248 (59.68%), Postives = 173/248 (69.76%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE +H I +N++N LS IT PS TQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y L+I FR F K+K V + +F FS+ Y+ + S NYY+YQ+ ++LD WSYR+ISLGF LT GIL GAVWAN+AWGSYWNWDPKETWAFITWTIF IYLH+RTN W+G NSA+VAS+GFLIIWICYFG+NLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWALYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAAILIIRFRNNFFFFSKKKKNVLLK-TFFFSDF-YVKRSSLKSTSVPSFPNYYKYQLTERLDSWSYRVISLGFTLLTIGILCGAVWANDAWGSYWNWDPKETWAFITWTIFAIYLHSRTNLNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSF 314
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_DRANE (Cytochrome c biogenesis protein ccsA OS=Draba nemorosa GN=ccsA PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 2.161e-78 Identity = 155/257 (60.31%), Postives = 182/257 (70.82%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLF----LKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLS----ARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + F K +N+L+AITAPSA F QGFATSG L KM QS ILVPALQ QWLMMHVSMM+LGY LVITFRKV+ F +K KN + N F F ++ Y+ E+ ++ L S ++NYYR Q+I+QLD WS+RIISLGFIFLT GILS +VWANE WGSYWNWDPKETWAFITWTIF IYLH +TN G++S IV ++GFL+IWICYFGVNLLGIGLHSYGSF Sbjct: 71 SNLYESLIFLSWAFSIIHMVSYFNKKQKNYLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVVPPFWNENIKTKNLL--NELFYF-DVYYIKERNSILLQQNSNFSFSKNYYRSQLIEQLDFWSFRIISLGFIFLTVGILSESVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRGIHSPIVDAIGFLLIWICYFGVNLLGIGLHSYGSF 324 The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bpback to top |