DY305476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_LEMMI (Cytochrome c biogenesis protein ccsA OS=Lemna minor GN=ccsA PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 6.286e-78 Identity = 155/256 (60.55%), Postives = 183/256 (71.48%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIH---KIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMN--EKKNVFLN---SLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH KI++ KN +N+LSAIT PSA FTQ FATSG T+MH+S ILVPAL+ WLMMHVSMM+L Y LVITFRK +L ++ +N + GS F ++ Y+N E NV N S S +NYY+YQ++++LD WS R+IS+GF FLT GILSGAVWANEAWGSYWNWDPKETWAFITWTI+ IY HTRT +G NSAIVAS+GF IIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SNLYESLMFLSWSFAIIHMIPKIWNHKN-KNYLSAITIPSAIFTQAFATSGLSTEMHESGILVPALRSHWLMMHVSMMLLSYAALLVGSLFSIALLVITFRKNGKLVVENQNLLI--GSSFFDQMDYLNFNENINVLENPSFSSSFKNYYKYQLVERLDYWSSRVISIGFSFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIYAIYSHTRTTKNGQGANSAIVASIGFFIIWICYFGVNLLGIGLHSYGSF 321
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_TRACE (Cytochrome c biogenesis protein ccsA OS=Trachelium caeruleum GN=ccsA PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 4.075e-77 Identity = 151/250 (60.40%), Postives = 177/250 (70.80%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE IH + K N+N LS ITA S FTQGFATSG LT++++S ILVPALQ +WL+MHVSMM+L Y LVIT RK K + + S F +IQY N++ ++F + S +NYY+ Q++QQLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYW+WDPKETWAFITW IF IYLHTRTN + G NSAIVA +GFLIIWICYFGVNLLGIGLHSYGSF Sbjct: 69 SNLYESLIFLSWSFSLIHIVAYLKKNKN-LSRITASSTIFTQGFATSGLLTEINKSGILVPALQSEWLIMHVSMMILSYAALLCGSLLSAALLVITCRK------KFNELLRLIESLSFDKIQYRNQRIHLFGKTYFFSVKNYYKIQLVQQLDYWSYRVISLGFIFLTMGILSGAVWANEAWGSYWSWDPKETWAFITWIIFAIYLHTRTNKNFWGANSAIVAVIGFLIIWICYFGVNLLGIGLHSYGSF 311
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CUSEX (Cytochrome c biogenesis protein ccsA OS=Cuscuta exaltata GN=ccsA PE=3 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 4.859e-75 Identity = 145/248 (58.47%), Postives = 172/248 (69.35%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDL E IH I F N LS IT+ S FTQGFATSG LT++ +S ILVPALQ +WL+MHVS+M+LGY +VITFRK + F K K+F+ F+EI Y K +F+ + NYY+ Q+IQ+LD WSY++I LGFIFLT GILSGAVWANEAWGSYW+WDPKETWAFITW +F IYLHTR +G NSAIVAS+GFLIIWICYFGVNL+G+GLHSYGSF Sbjct: 69 SDLSESLIFLSWSFALIHSIAYFTKNTKLLSTITSQSTVFTQGFATSGILTEIQKSSILVPALQSEWLIMHVSLMILGYAALLCGSLLSVALMVITFRKDGKFFSKSKDFL-------FTEIFY----KKIFV--FNYNNYYKTQLIQELDFWSYQVIGLGFIFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWIVFAIYLHTRKKRSLQGTNSAIVASIGFLIIWICYFGVNLVGLGLHSYGSF 303 HSP 2 Score: 23.483 bits (49), Expect = 4.859e-75 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = -2 Query: 878 IQRAIASSERGMTATAFC 931 I++ SSERGM T FC Sbjct: 34 IKKLYDSSERGMLVTFFC 51
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CUSRE (Cytochrome c biogenesis protein ccsA OS=Cuscuta reflexa GN=ccsA PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.893e-74 Identity = 144/248 (58.06%), Postives = 169/248 (68.15%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 SDL E IH I F N LS IT+ S FTQGFATSG LTK+ +S IL+PAL+ +WL+MHVS+M+LGY +VIT R + F K NF+ F EI Y N KN F A NYY+ Q+I++LD WSY++ISLGFIFLT GILSGAVWANEAWGSYW+WDPKETWAFITW +F IYLHTR N + NSAIVAS+GF+IIWICYFGVNL+G+GLHSYGSF Sbjct: 69 SDLSESLIFLSWSFALIHSIGYFTKNLKFLSTITSQSTLFTQGFATSGILTKIQKSSILIPALKSEWLIMHVSLMILGYAALLCGSLLSVALMVITVRNDGKFFFKSNNFL-------FREISYQN--KNFFY----AINYYKTQLIKELDFWSYQVISLGFIFLTIGILSGAVWANEAWGSYWSWDPKETWAFITWIVFAIYLHTRININLQSTNSAIVASLGFIIIWICYFGVNLVGLGLHSYGSF 303
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_MARPO (Cytochrome c biogenesis protein ccsA OS=Marchantia polymorpha GN=ccsA PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 9.743e-63 Identity = 127/249 (51.00%), Postives = 151/249 (60.64%), Query Frame = -1 Query: 87 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS---LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 824 S+LYE IH I + K+ L ITAPSA T GFAT +M +S LVPALQ WLMMHV+MM+L Y L+IT K L + F SF F + E + + + S N+ ++Q+I++LD WSYR+ISLGF LT GILSGAVWANEAWGSYWNWDPKETWA ITW IF IYLHTR W+G AI+AS+GF I+WICY GVNLLG GLHSYG Sbjct: 69 SNLYESSMFLSWSFTLIHLILENKSKNTWLGIITAPSAMLTHGFATLSLPKEMQESVFLVPALQSHWLMMHVTMMMLSYSTLLCGSLLAITILIITLTKQKNLPILTSYFNFPFNSFIFKNLLQPMENEILSYKTQKVFSFINFRKWQLIKELDNWSYRVISLGFPLLTIGILSGAVWANEAWGSYWNWDPKETWALITWLIFAIYLHTRMIKGWQGKKPAIIASLGFFIVWICYLGVNLLGKGLHSYG 317
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_CYCTA (Cytochrome c biogenesis protein ccsA OS=Cycas taitungensis GN=ccsA PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 2.835e-62 Identity = 130/255 (50.98%), Postives = 160/255 (62.75%), Query Frame = -1 Query: 87 SDLYEXXXXXXXXXXXIHKIFDFKNNQNH-LSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRK---VIRLFLKRKN-----FVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 824 S+LYE IH I + ++ ++ L AITAPS T GFATSG +M QS +LVPALQ WLMMHVSM++L Y L+ITFR+ ++ L R N F N + Q ++ +N F LS N+ + ++ QQLD WSYR+I LGF+ LT GILSGAVWANEAWGS W+WDPKETWA ITW IF IYLHTR N W+ N AI+AS+G I+WICY GV+LLGIGLHSYG Sbjct: 68 SNLYESFMFLSWSSSVIHIILEVRSQKDRGLGAITAPSTMLTHGFATSGLPKEMQQSAMLVPALQSHWLMMHVSMILLSYATLLCGSLSSIAFLIITFRRNRRILSLLSARDNSFIWPFPSRNNLYLHE--QEKSDLQNTFY--LSFTNHRKCKLTQQLDYWSYRVIGLGFLLLTIGILSGAVWANEAWGSRWSWDPKETWALITWIIFAIYLHTRVNKGWQDENPAIIASLGSFIVWICYLGVDLLGIGLHSYG 318
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_PINTH (Cytochrome c biogenesis protein ccsA OS=Pinus thunbergii GN=ccsA PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 2.484e-58 Identity = 128/262 (48.85%), Postives = 152/262 (58.02%), Query Frame = -1 Query: 87 SDLYEXXXXXXXXXXXIHKIFDFKNNQNH-LSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITF---RKVI---------RLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS---LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYG 824 S+LYE H + + ++ + L AITAPSA T GFAT G +M +S +LVPALQ W MMHVSM++ Y LVI R+VI R L +NF Y +EK+ L S+ NY + Q+I+QLD WSYR I LGF T G LSGA+WANEAWGSYW+WDPKETWA ITWTIF IYLHTR N W+G AIVAS+GF I+WI Y GVNLLGIGLHSYG Sbjct: 68 SNLYESFMFLSWSSSVFHILLEVRSRDDRWLGAITAPSAMLTHGFATLGLPEEMQRSGMLVPALQSHWSMMHVSMILFSYATLLCGSLASIALLVIMSGVNRQVIFGAMDNLFSRAILPNENF-------------YSHEKQKSDLQYTVYFSSTNYRKCQLIKQLDHWSYRAIGLGFSLSTIGTLSGAIWANEAWGSYWSWDPKETWALITWTIFAIYLHTRMNKGWQGEEPAIVASLGFFIVWIRYLGVNLLGIGLHSYG 316
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_WELMI (Cytochrome c biogenesis protein ccsA OS=Welwitschia mirabilis GN=ccsA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 2.570e-55 Identity = 115/249 (46.18%), Postives = 140/249 (56.22%), Query Frame = -1 Query: 81 SDLYEXXXXXXXXXXXIHKIFDFKN-NQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSF 824 S+LYE I D KN N + ITAPSA FT FAT +M QS+ L+PALQ WL+MHV+++ LGY L I K + F + +Y E K + S +N+ + Q+I Q+D SY I +GF FLT GILSGAVWANEAWGSYW+WDPKE WA ITW IF Y+H R N WEG A+VAS+G +WICYFGVN+LGIG HSYG F Sbjct: 68 SNLYESLMFFSWNFCLIPFFIDIKNPNTQWIGVITAPSALFTHAFATLILPIEMQQSQRLIPALQSHWLIMHVTIIFLGYVTLLCGSLSSIALLAINLEKKLSFFT------------LYFRKEYSYENKRKAFHPYSFKNFRKSQMIHQIDNLSYYTIVIGFTFLTIGILSGAVWANEAWGSYWSWDPKEIWALITWLIFANYIHIRLNKGWEGNKPALVASLGLFFVWICYFGVNILGIGFHSYGWF 304
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_HETA4 (Cytochrome c biogenesis protein ccsA OS=Heterosigma akashiwo (strain CCMP452) GN=ccsA PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.080e-53 Identity = 110/251 (43.82%), Postives = 142/251 (56.57%), Query Frame = -1 Query: 78 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVI-TFRKVIRLFLKRKNFVHVNGSFCFSEIQY-MNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 824 S+LYE I++ +FK + A+ P QGFA+ T M +S LVPALQ WLM+HVSMM+L Y LV+ +K++ ++ FV N F + + +N+ N+ + + R ++I LD WSYR I +GF FLT GI+SGAVWANEAWGSYW+WDPKETWA ITW IF YLH R W G +A + S GF I+W+CY GVN LG GLHSYG N Sbjct: 76 SNLYESLMFLSCLLLFIYQFIEFKTRSRVIGALVLPLIVLVQGFASLSLPTAMQKSSPLVPALQSNWLMLHVSMMMLSYATLLLGSLFSILYLVLYKDKKILTKKSIKEQFVEENFVFQLTTSAFSLNQTSNIITEAKTDRQ----RLILSLDNWSYRTIGIGFPFLTMGIISGAVWANEAWGSYWSWDPKETWALITWLIFASYLHARLTKGWRGKRAAFLGSFGFFIVWVCYLGVNFLGKGLHSYGFLN 322
BLAST of DY305476 vs. ExPASy Swiss-Prot
Match: CCSA_HETA2 (Cytochrome c biogenesis protein ccsA OS=Heterosigma akashiwo (strain NIES-293) GN=ccsA PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.080e-53 Identity = 110/251 (43.82%), Postives = 142/251 (56.57%), Query Frame = -1 Query: 78 SDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVI-TFRKVIRLFLKRKNFVHVNGSFCFSEIQY-MNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNWDPKETWAFITWTIFGIYLHTRTNTKWEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFN 824 S+LYE I++ +FK + A+ P QGFA+ T M +S LVPALQ WLM+HVSMM+L Y LV+ +K++ ++ FV N F + + +N+ N+ + + R ++I LD WSYR I +GF FLT GI+SGAVWANEAWGSYW+WDPKETWA ITW IF YLH R W G +A + S GF I+W+CY GVN LG GLHSYG N Sbjct: 76 SNLYESLMFLSCLLLFIYQFIEFKTRSRVIGALVLPLIVLVQGFASLSLPTAMQKSSPLVPALQSNWLMLHVSMMMLSYATLLLGSLFSILYLVLYKDKKILTKKSIKEQFVEENFVFQLTTSAFSLNQTSNIITEAKTDRQ----RLILSLDNWSYRTIGIGFPFLTMGIISGAVWANEAWGSYWSWDPKETWALITWLIFASYLHARLTKGWRGKRAAFLGSFGFFIVWVCYLGVNFLGKGLHSYGFLN 322 The following BLAST results are available for this feature:
BLAST of DY305476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 141
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305476 ID=DY305476; Name=DY305476; organism=Citrus sinensis; type=EST; length=1202bpback to top |