DY305475

Overview
NameDY305475
Unique NameDY305475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECOL6 (Flavoprotein wrbA OS=Escherichia coli O6 GN=wrbA PE=3 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECOL5 (Flavoprotein wrbA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECOK1 (Flavoprotein wrbA OS=Escherichia coli O1:K1 / APEC GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECOHS (Flavoprotein wrbA OS=Escherichia coli O9:H4 (strain HS) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECODH (Flavoprotein wrbA OS=Escherichia coli (strain K12 / DH10B) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECOBW (Flavoprotein wrbA OS=Escherichia coli (strain K12 / BW2952) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECO8A (Flavoprotein wrbA OS=Escherichia coli O8 (strain IAI1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECO7I (Flavoprotein wrbA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECO55 (Flavoprotein wrbA OS=Escherichia coli (strain 55989 / EAEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
[Close]
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECO45 (Flavoprotein wrbA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.525e-44
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1 
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198
The following BLAST results are available for this feature:
BLAST of DY305475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_ECOL63.525e-4446.50Flavoprotein wrbA OS=Escherichia coli O6 GN=wrbA P... [more]
WRBA_ECOL53.525e-4446.50Flavoprotein wrbA OS=Escherichia coli O6:K15:H31 (... [more]
WRBA_ECOK13.525e-4446.50Flavoprotein wrbA OS=Escherichia coli O1:K1 / APEC... [more]
WRBA_ECOHS3.525e-4446.50Flavoprotein wrbA OS=Escherichia coli O9:H4 (strai... [more]
WRBA_ECODH3.525e-4446.50Flavoprotein wrbA OS=Escherichia coli (strain K12 ... [more]
WRBA_ECOBW3.525e-4446.50Flavoprotein wrbA OS=Escherichia coli (strain K12 ... [more]
WRBA_ECO8A3.525e-4446.50Flavoprotein wrbA OS=Escherichia coli O8 (strain I... [more]
WRBA_ECO7I3.525e-4446.50Flavoprotein wrbA OS=Escherichia coli O7:K1 (strai... [more]
WRBA_ECO553.525e-4446.50Flavoprotein wrbA OS=Escherichia coli (strain 5598... [more]
WRBA_ECO453.525e-4446.50Flavoprotein wrbA OS=Escherichia coli O45:K1 (stra... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AE07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305475 ID=DY305475; Name=DY305475; organism=Citrus sinensis; type=EST; length=839bp
GCCAAAGTGTATATTGTGTACTATTCCATGTATGGACATGTAGAGAAACT
GGCAGAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGGTGTTGAAGCCA
AATTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTACTTGGTAAGATG
AGTGCACCACCAAAGAGTGATGTACCTATTATTACCCCCAACGAACTTGC
TGAGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATTTGGAATGATGG
CTGCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTCTATGGAGGACA
CAACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGCACTGGGTCACA
AGGTGGTGGACAAGAGACTACAGCGTTGACGGCAATTACTCAGCTTGTTC
ACCATGGGATGATATTTGTTCCTATTGGATACACATTTGGTGCTGGCATG
TTTGAGATGGAGAAAGTGAAAGGTGGAAGTCCCTACGGTGCAGGAACTTT
TGCTGGAGATGGCTCGAGACAGCCAACTGAGCTTGAGTTGGAGCAAGCTT
TCCACCAGGGAAAACACATTGCGGGCATTGCAAAGAAGCTGAAGGGAAGT
GCTTAAATATTTCAATTTACAATACAACCATTAGGTGGACTTATTCCATT
CTTTTCGTCTCTAGAATTCCCGGTTTCCTATATCTTCTGGTTTGCAAACA
ATAAATTCTTGCTTTGTTATCAGTATAAGCTTTGTGCGTGTGTCATAAAG
TGGCTTTTCTTCATGAAAAAAAGTTGCTTGGTTGATTATTTGTACTTCCT
CTATACCTTAAATTGGGAAATATTATGTCTTCGTCCTTT
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