DY305475

Overview
NameDY305475
Unique NameDY305475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_SALDC (Flavoprotein wrbA OS=Salmonella dublin (strain CT_02021853) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.014e-44
Identity = 90/200 (45.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_SALAR (Flavoprotein wrbA OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.014e-44
Identity = 90/200 (45.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_SALA4 (Flavoprotein wrbA OS=Salmonella agona (strain SL483) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.014e-44
Identity = 90/200 (45.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_DESMR (Flavoprotein wrbA OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.014e-44
Identity = 97/201 (48.26%), Postives = 124/201 (61.69%), Query Frame = 1
Query:    7 VYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLK 594
            V IVYYS+YGHV  +A+ + +G   V G+ A L +VPETL EEV+GKM A       S VP  T  EL +AD  VFG PTRFG M  Q + FLDATG +W    L GKP G+F              ++ I  L+HHGMI V + Y+F AG   +++V GGSPYGA T A GDGSR P+E EL+ A  QG+HIA + ++L+
Sbjct:    3 VLIVYYSLYGHVAAMAQAVAEGVHQVPGMTATLRRVPETLSEEVIGKMGATEAQKALSHVPACTLEELEDADAIVFGTPTRFGNMCGQMRQFLDATGQIWMRGGLVGKPGGVFCSTATQHGGQETTLMSFIQTLLHHGMIVVGLPYSF-AGQMRLDEVTGGSPYGATTIAGGDGSRMPSENELDAARFQGRHIADVTRRLR 202          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ENT38 (Flavoprotein wrbA OS=Enterobacter sp. (strain 638) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.854e-44
Identity = 97/200 (48.50%), Postives = 125/200 (62.50%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  I +GA+ V+GVE  + +VPET+  E   K     ++  P  TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW T  L GK A +F               T  T L HHGM+ VPIGY     +F++  V+GG+PYGA T A GDGSRQP++ EL  A  QG+H+AG+AKKL G
Sbjct:    2 AKVLVLYYSMYGHIETMAHAIAEGANKVDGVEVVIKRVPETMNAEAFLKAGGKTQN-APQATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWATGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYG-AQELFDVSAVRGGTPYGATTIAGGDGSRQPSQEELAIARFQGEHVAGLAKKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_SHISS (Flavoprotein wrbA OS=Shigella sonnei (strain Ss046) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.026e-43
Identity = 91/200 (45.50%), Postives = 128/200 (64.00%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            A++ ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    5 ARILVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 201          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_SHIDS (Flavoprotein wrbA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.026e-43
Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_SALPK (Flavoprotein wrbA OS=Salmonella paratyphi A (strain AKU_12601) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.026e-43
Identity = 90/200 (45.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M  Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMPGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_SALPB (Flavoprotein wrbA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=wrbA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.026e-43
Identity = 90/200 (45.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+ VPIGY     +F++  V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSHVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_SALPA (Flavoprotein wrbA OS=Salmonella paratyphi A GN=wrbA PE=3 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 1.026e-43
Identity = 90/200 (45.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M  Q + FLD TGGLW +  L GK  G  +              +  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMPGQMRTFLDQTGGLWASGALYGK-LGSVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
The following BLAST results are available for this feature:
BLAST of DY305475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_SALDC6.014e-4445.00Flavoprotein wrbA OS=Salmonella dublin (strain CT_... [more]
WRBA_SALAR6.014e-4445.00Flavoprotein wrbA OS=Salmonella arizonae (strain A... [more]
WRBA_SALA46.014e-4445.00Flavoprotein wrbA OS=Salmonella agona (strain SL48... [more]
WRBA_DESMR6.014e-4448.26Flavoprotein wrbA OS=Desulfovibrio magneticus (str... [more]
WRBA_ENT387.854e-4448.50Flavoprotein wrbA OS=Enterobacter sp. (strain 638)... [more]
WRBA_SHISS1.026e-4345.50Flavoprotein wrbA OS=Shigella sonnei (strain Ss046... [more]
WRBA_SHIDS1.026e-4346.23Flavoprotein wrbA OS=Shigella dysenteriae serotype... [more]
WRBA_SALPK1.026e-4345.00Flavoprotein wrbA OS=Salmonella paratyphi A (strai... [more]
WRBA_SALPB1.026e-4345.00Flavoprotein wrbA OS=Salmonella paratyphi B (strai... [more]
WRBA_SALPA1.026e-4345.00Flavoprotein wrbA OS=Salmonella paratyphi A GN=wrb... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AE07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305475 ID=DY305475; Name=DY305475; organism=Citrus sinensis; type=EST; length=839bp
GCCAAAGTGTATATTGTGTACTATTCCATGTATGGACATGTAGAGAAACT
GGCAGAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGGTGTTGAAGCCA
AATTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTACTTGGTAAGATG
AGTGCACCACCAAAGAGTGATGTACCTATTATTACCCCCAACGAACTTGC
TGAGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATTTGGAATGATGG
CTGCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTCTATGGAGGACA
CAACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGCACTGGGTCACA
AGGTGGTGGACAAGAGACTACAGCGTTGACGGCAATTACTCAGCTTGTTC
ACCATGGGATGATATTTGTTCCTATTGGATACACATTTGGTGCTGGCATG
TTTGAGATGGAGAAAGTGAAAGGTGGAAGTCCCTACGGTGCAGGAACTTT
TGCTGGAGATGGCTCGAGACAGCCAACTGAGCTTGAGTTGGAGCAAGCTT
TCCACCAGGGAAAACACATTGCGGGCATTGCAAAGAAGCTGAAGGGAAGT
GCTTAAATATTTCAATTTACAATACAACCATTAGGTGGACTTATTCCATT
CTTTTCGTCTCTAGAATTCCCGGTTTCCTATATCTTCTGGTTTGCAAACA
ATAAATTCTTGCTTTGTTATCAGTATAAGCTTTGTGCGTGTGTCATAAAG
TGGCTTTTCTTCATGAAAAAAAGTTGCTTGGTTGATTATTTGTACTTCCT
CTATACCTTAAATTGGGAAATATTATGTCTTCGTCCTTT
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