DY305475

Overview
NameDY305475
Unique NameDY305475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_GEOMG (Flavoprotein wrbA OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.340e-43
Identity = 100/203 (49.26%), Postives = 125/203 (61.58%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA--PPKS--DVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            KV I +YSMYGH+ ++AE + +G   V G EA L +VPETLP +VL KM A  P K+   +P+ T +ELA AD  +FG PTRFG M  Q + FLDATGGLW    L GK  G+F              LT  T L+H GM+ V + Y F AG   ++++ GGSPYGA T A G G R P+E EL  A +QGK+IA IA KLKG
Sbjct:    2 KVLIPFYSMYGHIYRMAEAVAEGVREVSGAEAVLRRVPETLPTDVLQKMGAVEPQKAFAHIPVCTVDELAAADAIIFGTPTRFGNMCGQMRQFLDATGGLWVKGGLVGKAGGVFTSSATQHGGQESTILTFHTFLLHQGMVLVGLPYAF-AGQMRIDEITGGSPYGASTIAGGQGERLPSENELAGARYQGKYIAEIAAKLKG 203          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_YERE8 (Flavoprotein wrbA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=wrbA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.898e-43
Identity = 93/198 (46.97%), Postives = 118/198 (59.60%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 591
            AK+ ++YYSMYGH+E LA  I +GA  V+GVE  + +VPET+P +   K         P+ TP ELA+  G +FG PTRFG MA Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KL
Sbjct:    2 AKILVLYYSMYGHIETLASAIAEGAQKVDGVEVTIKRVPETMPADAFAKAGGKTDQKAPVATPQELADYHGIIFGTPTRFGNMAGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-ATELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKL 197          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_KLEP3 (Flavoprotein wrbA OS=Klebsiella pneumoniae (strain 342) GN=wrbA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.898e-43
Identity = 94/200 (47.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+E +A  +  GA+ V+GVE  + +VPET+  E   K     ++  P+ TP ELAE D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGMI VPIGY     +F++ +V+GG+PYGA T A GDGSRQP+E EL  A +QG+H+A +A K+ G
Sbjct:    2 AKILVLYYSMYGHIETMAHAVADGANRVDGVEVVVKRVPETMQAEAFAKAGGKTQN-APVATPQELAEYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKIASVFSSTGTGGGQEQTITST-WTTLAHHGMIIVPIGYG-AQELFDISQVRGGTPYGATTIAGGDGSRQPSEEELAIARYQGEHVAKLAVKVHG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_CITK8 (Flavoprotein wrbA OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=wrbA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.898e-43
Identity = 90/200 (45.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+E +A  + +GA+ V+G E  + +VPET+  E+  K     ++  P+ TP EL + D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKILVLYYSMYGHIETMAHAVAEGANKVDGAEVVIKRVPETMQPEIFAKAGGKTQN-APVATPQELPDYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: ALTA7_ALTAL (Minor allergen Alt a 7 OS=Alternaria alternata GN=ALTA7 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.898e-43
Identity = 99/191 (51.83%), Postives = 124/191 (64.92%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK-SDVPIIT-PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMF-EMEKVKGGSPYGAGTF-AGDGSRQPTELELEQAFHQGK 564
            K+ IVYYSMYGH++K+A+   KG     G +AKL+QV ETLP+EVL KM APPK S VP++  P  L E DG +FG PTR+G   AQFK F D TG  W+     GK AG+F             A+T+++ LV HG I+VP+GY     M   +++V GGSP+GAGTF AGDGSRQP+ELEL  A  QGK
Sbjct:    4 KIAIVYYSMYGHIKKMADAELKGIQEAGG-DAKLFQVAETLPQEVLDKMYAPPKDSSVPVLEDPAVLEEFDGILFGIPTRYGNFPAQFKTFWDKTGKQWQQGAFWGKYAGVFVSTGTLGGGQETTAITSMSTLVDHGFIYVPLGYKTAFSMLANLDEVHGGSPWGAGTFSAGDGSRQPSELELNIAQAQGK 193          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECO5E (Flavoprotein wrbA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.091e-43
Identity = 92/200 (46.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+  ++  K     ++  P+ TP ELA  D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMSPQLFEKAGGKTQT-APVATPQELANYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ECO57 (Putative flavoprotein wrbA OS=Escherichia coli O157:H7 GN=wrbA PE=5 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 5.091e-43
Identity = 92/200 (46.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+  ++  K     ++  P+ TP ELA  D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A KL G
Sbjct:    2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMSPQLFEKAGGKTQT-APVATPQELANYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_PARL1 (Flavoprotein wrbA OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=wrbA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.134e-42
Identity = 88/198 (44.44%), Postives = 117/198 (59.09%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLK 594
            KV ++Y+S YGH+E LA+ + +GA+S  G E  L +VPET+P + +       + + P+ TP EL + D  +FG PTRFG M  Q + FLD TGGLW    L GK  G  +              +  T L HHGM+ V + Y+ G  +F++ +V+GGSPYGA T A GDG RQPTE EL  A  QG H+A IA KLK
Sbjct:    6 KVLVLYHSSYGHIETLAKAVAEGAASQAGTEVLLKRVPETMPADAMANAGMKVEQEAPVATPQELGDYDAVIFGTPTRFGNMTGQMRTFLDQTGGLWAKGALVGK-VGSVFTSTGTGGGNETTITSFHTNLFHHGMVVVGLPYSVGTELFDISEVRGGSPYGASTLAGGDGKRQPTEKELSLARKQGAHVASIAAKLK 202          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_GEOSL (Flavoprotein wrbA OS=Geobacter sulfurreducens GN=wrbA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.300e-42
Identity = 97/202 (48.02%), Postives = 123/202 (60.89%), Query Frame = 1
Query:    7 VYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSA--PPKS--DVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            V IVYYSMYGH+ ++AE + +G   V G EA L +VPETL  +VL KM A  P K+   +P+ T +ELA AD  +FG PTRFG M  Q + FLDATGGLW    L GK AG+F              LT  T L+H GM+ V + Y F AG   ++++ GGSPYGA T A G G R P+E +L  A  QG+++A IA KL G
Sbjct:    3 VLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFAHIPVATVDELASADAIIFGTPTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSATQHGGQESTILTFHTFLLHQGMVIVGLPYAF-AGQTRIDEITGGSPYGASTIAGGQGERLPSENDLAGARFQGRYVAQIAAKLNG 203          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ALHEH (Flavoprotein wrbA OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.300e-42
Identity = 89/200 (44.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AK+ ++YYSMYGH+  +A+ + +G+  V G    + +VPE + EE L K  AP   D P+  P ELA+ DG +FG PTRFG MA Q + FLD TGGLW   +L GK   +F               +  T L+HHGM+ V + Y+  A +  M+++ GG+PYGA T AG DGSRQP+E EL  A  QG+H+A I +KL G
Sbjct:    2 AKILVLYYSMYGHIRTMADAVAEGSREVSGTTVDIKRVPELMSEEALRKAGAPA-DDTPVARPEELADYDGIIFGSPTRFGNMAGQMRNFLDQTGGLWAQGKLIGKVGSVFTSTGSQHGGQETTLTSMQTTLMHHGMVIVGVPYSC-AALTNMDEITGGTPYGASTLAGPDGSRQPSENELTIARFQGRHVAEITQKLAG 199          
The following BLAST results are available for this feature:
BLAST of DY305475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_GEOMG1.340e-4349.26Flavoprotein wrbA OS=Geobacter metallireducens (st... [more]
WRBA_YERE83.898e-4346.97Flavoprotein wrbA OS=Yersinia enterocolitica serot... [more]
WRBA_KLEP33.898e-4347.00Flavoprotein wrbA OS=Klebsiella pneumoniae (strain... [more]
WRBA_CITK83.898e-4345.00Flavoprotein wrbA OS=Citrobacter koseri (strain AT... [more]
ALTA7_ALTAL3.898e-4351.83Minor allergen Alt a 7 OS=Alternaria alternata GN=... [more]
WRBA_ECO5E5.091e-4346.00Flavoprotein wrbA OS=Escherichia coli O157:H7 (str... [more]
WRBA_ECO575.091e-4346.00Putative flavoprotein wrbA OS=Escherichia coli O15... [more]
WRBA_PARL11.134e-4244.44Flavoprotein wrbA OS=Parvibaculum lavamentivorans ... [more]
WRBA_GEOSL3.300e-4248.02Flavoprotein wrbA OS=Geobacter sulfurreducens GN=w... [more]
WRBA_ALHEH3.300e-4244.50Flavoprotein wrbA OS=Alkalilimnicola ehrlichei (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AE07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305475 ID=DY305475; Name=DY305475; organism=Citrus sinensis; type=EST; length=839bp
GCCAAAGTGTATATTGTGTACTATTCCATGTATGGACATGTAGAGAAACT
GGCAGAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGGTGTTGAAGCCA
AATTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTACTTGGTAAGATG
AGTGCACCACCAAAGAGTGATGTACCTATTATTACCCCCAACGAACTTGC
TGAGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATTTGGAATGATGG
CTGCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTCTATGGAGGACA
CAACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGCACTGGGTCACA
AGGTGGTGGACAAGAGACTACAGCGTTGACGGCAATTACTCAGCTTGTTC
ACCATGGGATGATATTTGTTCCTATTGGATACACATTTGGTGCTGGCATG
TTTGAGATGGAGAAAGTGAAAGGTGGAAGTCCCTACGGTGCAGGAACTTT
TGCTGGAGATGGCTCGAGACAGCCAACTGAGCTTGAGTTGGAGCAAGCTT
TCCACCAGGGAAAACACATTGCGGGCATTGCAAAGAAGCTGAAGGGAAGT
GCTTAAATATTTCAATTTACAATACAACCATTAGGTGGACTTATTCCATT
CTTTTCGTCTCTAGAATTCCCGGTTTCCTATATCTTCTGGTTTGCAAACA
ATAAATTCTTGCTTTGTTATCAGTATAAGCTTTGTGCGTGTGTCATAAAG
TGGCTTTTCTTCATGAAAAAAAGTTGCTTGGTTGATTATTTGTACTTCCT
CTATACCTTAAATTGGGAAATATTATGTCTTCGTCCTTT
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