DY305475

Overview
NameDY305475
Unique NameDY305475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_METAC (Flavoprotein wrbA OS=Methanosarcina acetivorans GN=wrbA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.034e-40
Identity = 96/207 (46.38%), Postives = 122/207 (58.94%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIIT--PNE--LAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            KV I++YSMYGHV ++AE +  GA  VEG E  ++QVPETLPEEVL KM A       + +P++T   NE  LA AD  +FG PTR+G M AQ +A LD  GGLW      GK   +F              LT    L+H GMI V + Y+       M+++ GGSPYG  T A GDGSRQP+E EL  A +QG+H+  IAKK+ G
Sbjct:    3 KVNIIFYSMYGHVYRMAEAVAAGAREVEGAEVGIYQVPETLPEEVLEKMGAIETKKLFAHIPVLTREMNEEVLAGADALIFGTPTRYGNMTAQMRAVLDGLGGLWNRDAFVGKVGSVFTSSGTQHGGQESTILTFHVTLLHLGMILVGLPYS-EKRQTRMDEITGGSPYGVSTIAGGDGSRQPSENELAMARYQGRHVTLIAKKIAG 208          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_ACICJ (Flavoprotein wrbA OS=Acidiphilium cryptum (strain JF-5) GN=wrbA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.034e-40
Identity = 91/200 (45.50%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYS +GHVE +A+ + +GA +  G E  L +VPET+PE+    + A    D P+ TP ELA+ D  +FG PTRFG M  Q + FLD TGGLW    L GK   +F               +  T L HHGMI V + Y+    +  M ++ GG+PYGA T AG DGSRQP+  EL  A  QGKH+AGIA KL G
Sbjct:    2 AKVLVLYYSTWGHVETMAKAVAEGAKAA-GAEVTLKRVPETMPEDTAKAIHAKTDQDAPVATPAELADYDAIIFGTPTRFGNMCGQMRNFLDQTGGLWAKGALIGKVGSVFASTGTQHGGQETTITSFHTTLFHHGMIVVGVPYS-NPELTNMNEITGGTPYGATTLAGADGSRQPSANELAIARAQGKHVAGIAAKLAG 199          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_RHOCS (Flavoprotein wrbA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=wrbA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.880e-40
Identity = 88/199 (44.22%), Postives = 117/199 (58.79%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            KV ++YYS YGH+E +A+ + +GA SV G E  + +VPE +PEEV            P+ T  ELAE D  + G PTRFG M +Q   FLD TGGLW    L GK    F               + +T L+HHGM+ V + Y++  G+  +E+VKGG+PYGA T A GDGSR+PTE+EL  A +QG  +A  A KL+G
Sbjct:    3 KVLVLYYSSYGHIETMAQAVAEGARSVPGTEVAVKRVPELVPEEVARNAGMKLDQPAPVATVAELAEYDAIIVGSPTRFGRMTSQMANFLDQTGGLWAKGALNGKVGAAFTSTASQHGGQETTLFSILTNLLHHGMVVVGLPYSY-EGLSGVEQVKGGTPYGASTIADGDGSRRPTEVELGGARYQGALVARTAAKLRG 200          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_AZOSE (Flavoprotein wrbA OS=Azoarcus sp. (strain EbN1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.880e-40
Identity = 90/201 (44.78%), Postives = 118/201 (58.71%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSD----VPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 591
            KV I++YSMYGH+ ++AE + +GA SV G E  L++VPE +P+EVL K  A         VP+    +L EAD  +FG PTRFG M AQ + FLD TGGLW    L GK   +F              L+    L+H GM+ V + YT    M  M+++ GGSPYGA T A GDGSR P++ E+E A  QG+H+A IA  L
Sbjct:    2 KVQIIFYSMYGHIFRMAEAVAEGARSVAGAEVGLFRVPELVPDEVLEKSGAKTAQQAFAHVPVAKTEQLPEADAIIFGTPTRFGNMCAQMRNFLDQTGGLWMKGSLVGKVGSVFTSTATQHGGQESTILSTHITLLHQGMVLVGLPYTEKRQM-GMDEILGGSPYGAATIAGGDGSRMPSQTEIEMAKFQGRHVAEIASAL 201          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_PHOLL (Flavoprotein wrbA OS=Photorhabdus luminescens subsp. laumondii GN=wrbA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.174e-39
Identity = 89/198 (44.95%), Postives = 116/198 (58.59%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLK 594
            K+ ++YYSMYGH+E LA  + +GA  V  VE  + +VPET+P E   K         P+ +  EL + D  + G PTRFG MA Q + FLD TGGLW   +L GK A +F               T  T L HHG I VPIGY     + ++ +++GG+PYGA T A GDGSR P E EL+ A +QG+H+A IAKKLK
Sbjct:    3 KILVLYYSMYGHIEALASAVAEGAKKVADVEVTIKRVPETIPPEAFTKAGGKVDQSAPVASVQELVDYDAIIIGTPTRFGNMAGQMRNFLDQTGGLWAEGKLYGKVASVFTSTGVGGGQEMTITST-WTTLAHHGFIIVPIGYGI-PEIGDISQMQGGTPYGASTIADGDGSRIPNENELKIARYQGEHVAKIAKKLK 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_BURCM (Flavoprotein wrbA OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=wrbA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.174e-39
Identity = 88/198 (44.44%), Postives = 116/198 (58.59%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 591
            AKV ++YYS YGHVE +A+ I +GA SV GVE  L +VPET+P +    +        P+ T +EL   D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F               +  T L+H GM+ V + Y   +G+  M ++ GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:    2 AKVLVLYYSSYGHVETMAQHIAEGAKSVPGVEVTLKRVPETIPADQAKAIGVKVDQAAPVATVDELPNYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHQGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELAVKL 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_METS4 (Flavoprotein wrbA OS=Methylobacterium sp. (strain 4-46) GN=wrbA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.533e-39
Identity = 88/200 (44.00%), Postives = 117/200 (58.50%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            AKV ++YYS YGH+E++A  + +GA    G E  + +VPE +PE+V  K         P+   +EL   D  +FG PTR+G MA+Q K FLD TGGLW    L GK   +F              L+  T L+HHGM+ V + Y F  G   + +V G SPYGA T A GDGSRQP+ +EL+ A +QG+H+AGIA KL G
Sbjct:    2 AKVLVLYYSTYGHIEQMAHAVAEGAREA-GAEVDVKRVPELVPEDVARKSHFKLDQSAPLARVDELPNYDAIIFGTPTRYGNMASQMKNFLDQTGGLWMKGALVGKVGSVFTSSASQHGGQESTILSFHTVLLHHGMVLVGLPYAF-QGQLGVSQVMGNSPYGASTIADGDGSRQPSPIELDGARYQGRHVAGIAAKLAG 199          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: P25_SCHPO (P25 protein OS=Schizosaccharomyces pombe GN=obr1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.533e-39
Identity = 93/189 (49.21%), Postives = 118/189 (62.43%), Query Frame = 1
Query:    7 VYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGY--TFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGK 564
            V IV YS YGHV KLAE  K G     G +A ++Q PETL  E+L KM A PK + P++T + L + D F+FG+PTR+G   AQF+ F D+TGGLW    L GK  G F+            ALTA+T  VHHGMIFVP+GY  TF   M  +E + GGS +GAG++AG DGSR  ++ ELE A  QG+
Sbjct:    7 VAIVIYSTYGHVVKLAEAEKAGIEKAGG-KAVIYQFPETLSPEILEKMHAAPKPNYPVVTLDVLTQYDAFLFGYPTRYGTPPAQFRTFWDSTGGLWVQGALHGKYFGQFFSTGTLGGGQESTALTAMTSFVHHGMIFVPLGYKNTFSL-MANVESIHGGSSWGAGSYAGADGSRNVSDDELEIARIQGE 193          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_HALHL (Flavoprotein wrbA OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.002e-39
Identity = 93/204 (45.59%), Postives = 121/204 (59.31%), Query Frame = 1
Query:    1 AKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQ----LVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 597
            +KV ++YYSMYGHVE LA+ + +GA    G E  + +VPET+PE+V  +  A    + P+ +  ELA+ D  +FG PTRFG MA Q + FLD TG LW   QL GK   +F               T IT     L HHGM+ V + Y     + ++  VKGGSPYGAGT A GDGSRQP E EL  A +QG+H+A IA++L G
Sbjct:    2 SKVLVLYYSMYGHVETLAQAVAEGARGA-GSEVVIKRVPETMPEDVARQAGAKLDQEAPVASLEELADYDAILFGTPTRFGNMAGQMRNFLDQTGSLWFNGQLIGKVGSVFTSTGTGGGNE-----TTITSFWHTLAHHGMVIVGLSYA-APELADLSVVKGGSPYGAGTIAGGDGSRQPNEQELALARYQGRHVAEIAQRLHG 198          
BLAST of DY305475 vs. ExPASy Swiss-Prot
Match: WRBA_AZOVD (Flavoprotein wrbA OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=wrbA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.615e-39
Identity = 91/202 (45.05%), Postives = 121/202 (59.90%), Query Frame = 1
Query:    4 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQ----LVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLK 594
            K+ ++YYSMYGH+E++AE + +GA SV GVE  L +VPET+PEEV  K  A      P   P ELA+ D  +FG PTRFG MA Q + FLD TGGLW +  L GK A +F             + T IT     L HHGM+ V + Y     + ++ + +GGSPYGA T AG DGSR+P+E EL  A  QG H+A +  +++
Sbjct:    3 KILVLYYSMYGHIERMAEAVAEGARSVPGVEVTLKRVPETMPEEVARKAGAKLDQAAPPAEPKELADYDAILFGTPTRFGNMAGQMRNFLDQTGGLWVSGALVGKFASVF-----TSTGTGGGSETTITSFWHTLAHHGMVIVGLPYVL-PELSDVSEPRGGSPYGAATIAGADGSRRPSEKELILASFQGAHVARLVVRMQ 198          
The following BLAST results are available for this feature:
BLAST of DY305475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_METAC4.034e-4046.38Flavoprotein wrbA OS=Methanosarcina acetivorans GN... [more]
WRBA_ACICJ4.034e-4045.50Flavoprotein wrbA OS=Acidiphilium cryptum (strain ... [more]
WRBA_RHOCS6.880e-4044.22Flavoprotein wrbA OS=Rhodospirillum centenum (stra... [more]
WRBA_AZOSE6.880e-4044.78Flavoprotein wrbA OS=Azoarcus sp. (strain EbN1) GN... [more]
WRBA_PHOLL1.174e-3944.95Flavoprotein wrbA OS=Photorhabdus luminescens subs... [more]
WRBA_BURCM1.174e-3944.44Flavoprotein wrbA OS=Burkholderia ambifaria (strai... [more]
WRBA_METS41.533e-3944.00Flavoprotein wrbA OS=Methylobacterium sp. (strain ... [more]
P25_SCHPO1.533e-3949.21P25 protein OS=Schizosaccharomyces pombe GN=obr1 P... [more]
WRBA_HALHL2.002e-3945.59Flavoprotein wrbA OS=Halorhodospira halophila (str... [more]
WRBA_AZOVD2.615e-3945.05Flavoprotein wrbA OS=Azotobacter vinelandii (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM1AE07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305475 ID=DY305475; Name=DY305475; organism=Citrus sinensis; type=EST; length=839bp
GCCAAAGTGTATATTGTGTACTATTCCATGTATGGACATGTAGAGAAACT
GGCAGAAGAGATAAAGAAAGGAGCTTCATCTGTTGAGGGTGTTGAAGCCA
AATTATGGCAGGTCCCTGAGACACTACCTGAGGAGGTACTTGGTAAGATG
AGTGCACCACCAAAGAGTGATGTACCTATTATTACCCCCAACGAACTTGC
TGAGGCTGATGGGTTTGTTTTTGGCTTCCCAACAAGATTTGGAATGATGG
CTGCTCAATTTAAAGCATTTTTAGATGCTACTGGTGGTCTATGGAGGACA
CAACAGCTCGCTGGCAAACCTGCTGGGATGTTCTACAGCACTGGGTCACA
AGGTGGTGGACAAGAGACTACAGCGTTGACGGCAATTACTCAGCTTGTTC
ACCATGGGATGATATTTGTTCCTATTGGATACACATTTGGTGCTGGCATG
TTTGAGATGGAGAAAGTGAAAGGTGGAAGTCCCTACGGTGCAGGAACTTT
TGCTGGAGATGGCTCGAGACAGCCAACTGAGCTTGAGTTGGAGCAAGCTT
TCCACCAGGGAAAACACATTGCGGGCATTGCAAAGAAGCTGAAGGGAAGT
GCTTAAATATTTCAATTTACAATACAACCATTAGGTGGACTTATTCCATT
CTTTTCGTCTCTAGAATTCCCGGTTTCCTATATCTTCTGGTTTGCAAACA
ATAAATTCTTGCTTTGTTATCAGTATAAGCTTTGTGCGTGTGTCATAAAG
TGGCTTTTCTTCATGAAAAAAAGTTGCTTGGTTGATTATTTGTACTTCCT
CTATACCTTAAATTGGGAAATATTATGTCTTCGTCCTTT
back to top