DY305474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.661e-42 Identity = 102/247 (41.30%), Postives = 144/247 (58.30%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF + Y + S GG R G H+ G ++ TG AF +RE Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIY--DVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 243
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 5.928e-42 Identity = 101/247 (40.89%), Postives = 143/247 (57.89%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWA NL+ + + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF + Y + S GG R G H+ G ++ TG AF +RE Sbjct: 14 EVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFFPVIY--DVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 243
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.725e-41 Identity = 101/247 (40.89%), Postives = 143/247 (57.89%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWA NLE E + I QV ++ +I+MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG++++ FAEL+M+SG+V E V W++FHS YDFGYL+KIL+ LP +F +LR+FF + Y + S GG R G H+ G ++ TG AF +RE Sbjct: 14 EVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILRLFFPIIY--DVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 243
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT7_XENTR (CCR4-NOT transcription complex subunit 7 OS=Xenopus tropicalis GN=cnot7 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.253e-41 Identity = 101/247 (40.89%), Postives = 143/247 (57.89%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWA NL+ + + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF + Y + S GG R G H+ G ++ TG AF +RE Sbjct: 14 EVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFVNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVELDFFEILRLFFPVIY--DVKYLMKSCKNLKGGLQEVAEQLELKRIGPQHQAGSDSLLTGMAFFKMRE 243
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 2.942e-41 Identity = 98/247 (39.68%), Postives = 145/247 (58.70%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWASNLE E I +++ Y +I+MDTEFPG+V RP R D+ Y++L+ NVD L +IQ+GLT ++ G P SG N W+FNF+ F++ D ++ DSI+LL G+ F+++ EEG+D++ FAEL+M+SG+V ++V W++FHS YDFGY+VK+LT LP EF +L +FF + +L G +L R G H+ G ++ TG AF ++E Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV--------VRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYP---SGINT---WQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDL--QRIGRQHQAGSDSLLTGMAFFRMKE 243
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 2.942e-41 Identity = 98/247 (39.68%), Postives = 145/247 (58.70%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWASNLE E I +++ Y +I+MDTEFPG+V RP R D+ Y++L+ NVD L +IQ+GLT ++ G P SG N W+FNF+ F++ D ++ DSI+LL G+ F+++ EEG+D++ FAEL+M+SG+V ++V W++FHS YDFGY+VK+LT LP EF +L +FF + +L G +L R G H+ G ++ TG AF ++E Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV--------VRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYP---SGINT---WQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDL--QRIGRQHQAGSDSLLTGMAFFRMKE 243
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: POP2_YEAST (Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae GN=POP2 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 1.279e-36 Identity = 79/183 (43.17%), Postives = 121/183 (66.12%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEF 821 R+VW SNL SEF +I Q++ +Y +S+ TEF G + RP FR K HY+ +++NVD LN IQ+GL+LSD++GN PD N W+FNF +FD + + +S+ELLR GI+FE++ G+D F++L+M SGL+ ++SV+W+T+H+AYD G+L+ IL S+P+ ++F Sbjct: 161 RDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGT------FRS-KVDYHYQTMRANVDFLNPIQLGLSLSDANGNKPD-----NGPSTWQFNF-EFDPKKEIMSTESLELLRKSGINFEKHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKEDF 330
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT7_CAEEL (CCR4-NOT transcription complex subunit 7 OS=Caenorhabditis elegans GN=ccf-1 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 8.879e-30 Identity = 85/261 (32.57%), Postives = 131/261 (50.19%), Query Frame = 3 Query: 279 VWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTF----MTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLREGNFFPNGREKKP 1049 V+ SN+E EF I ++ YP+++MDTEFPG+V P FR ++ ++ +V NV+ L LIQVG + + G LP G +W+FNF +F A D + +S+E+LR GIDF + G+ + F EL+ +SGL+ + ++W+TF S YDFGYL+K +T LP F + F +F + T + L G +L R G H+ G + T F +++ F N + P Sbjct: 26 VYMSNVEEEFARIRGFVEDYPYVAMDTEFPGVVATP------LGTFRSKEDFNYQQVF-CNVNMLKLIQVGFAMVNDKGELPPTGD------VWQFNF-NFSFAEDMFSHESVEMLRQAGIDFTLLQNNGIPTAVFGELLTTSGLITDPRITWLTFSSGYDFGYLLKSITLGDLPKEESTFFMCHKTLFPTSFDIKILLRTPNCASAKLKGGLQEVADQLD--VKRQGVRHQAGSDALLTAATFFKIKKQFFGDNWNQIAP 270
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana GN=CAF1-1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.560e-26 Identity = 81/258 (31.40%), Postives = 121/258 (46.90%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAEL-MMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAF---KNLREGNFFPNG 1034 R VW SN++ E +++ + R+P I+ DTE+PG+++R D S+ + Y+ +K NV+ LIQ G TL ++ G + GG +WE NF +F +D SIE LR G+D ++ R+EGVD + + + + V +VTF AYDF Y + IL LP EF T + FG + T L G S R G AH G ++ T F K++ E + F G Sbjct: 10 RRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSS---------DECYRAMKGNVENTKLIQCGFTLFNAKGEI-----GG----VWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVDMFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQVYDTKVMAGFCEGLGEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYEDSRFARG 249
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana GN=CAF1-5 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.571e-18 Identity = 77/248 (31.05%), Postives = 107/248 (43.15%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNES---VSWVTFHSAYDFGYLVKILTRRSLPSGLDEF-LTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNL 1007 EVW N ++E I + I++DTEFPG + +D S +R +K NVD +LIQ+GLTL G G WE N DF+ + SI L+ G+D ++ REEG+ E M + NE + WVTF +YD YL+K LTR+ LP EF TV ++ + + + S L G R G AH G ++ T R F L Sbjct: 4 EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRD---------MKFNVDNTHLIQLGLTL---------FGKGITKT--WEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIG---IEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDVKKMAGLCSGLSSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228 The following BLAST results are available for this feature:
BLAST of DY305474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305474 ID=DY305474; Name=DY305474; organism=Citrus sinensis; type=EST; length=1266bpback to top |