DY305474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.052e-18 Identity = 75/223 (33.63%), Postives = 99/223 (44.39%), Query Frame = 3 Query: 312 LISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEF----LTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPG 968 LI + Y FI++DTEFP + R + + Y + +VD LIQ+GLTL D +G + GG WE NF DF V DA SIE LR G+D + REEG+ F M +++WVTFH +YD YL+K T +LP + F VL + M + S L G T E G R G+AH G Sbjct: 3 LIEDCLRSYRFIAIDTEFPSTL---------RETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRI-----GGT----WEINFSDFGV-DDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLSSRL--GLETLAHEFGL--NRVGTAHHAG 202
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.626e-15 Identity = 73/246 (29.67%), Postives = 99/246 (40.24%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT-RRSLPSGLDEFLTVLRVFFG-YTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNL 1007 EVW N E E I + I++DTEFPG + +D S Y+ +K NVD +LIQ+G TL D G WE N DFD SI L+ G++ ++ REEG+ F + ++WV F +YD YLVK LT + LP +EF ++ G + F S L G R G AH G ++ T R F L Sbjct: 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDAS---------EEIRYRDMKFNVDNTHLIQLGFTLFDRRGFAK----------TWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 234
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 8.068e-15 Identity = 71/246 (28.86%), Postives = 99/246 (40.24%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT-RRSLPSGLDEFLTVLRVFFG-YTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNL 1007 EVW N E E + I + + I++DTEFPG + +D S Y+ +K NVD +LIQ+G TL D G WE N DF+ SI L+ G++ ++ EEG+ F + ++WV F +YD YLVK LT + LP +EF + G + F S L G R G AH G ++ T R F L Sbjct: 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDAS---------EEIRYRDMKFNVDNTHLIQLGFTLFDRRGITK----------TWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 229 The following BLAST results are available for this feature:
BLAST of DY305474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305474 ID=DY305474; Name=DY305474; organism=Citrus sinensis; type=EST; length=1266bpback to top |