DY305470

Overview
NameDY305470
Unique NameDY305470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1263
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305470 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 9.807e-21
Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  117 PPGFRFHPTDEELVMHYLCRKCLSQPIAV--PIIAEIDLYKFDPWDLPDLALYGEKE--WYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI----GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEY 482
            P GFRF P DEE+V HYL  K L    +    +I+ +D+  F+PWDLP  ++   ++  WYFF+ ++ KY  G +  R   SG+WK TG    +    G  + +G K+ LVF   K   G KT+W+MHEY
Sbjct:    4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVF---KNRDGSKTDWVMHEY 130          
BLAST of DY305470 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.015e-17
Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  117 PPGFRFHPTDEELVMHYLCRKCLSQPIAV--PIIAEIDLYKFDPWDLPDLALYGEKE--WYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI----GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEY 482
            P GFRF PTD E+V  YL  K L    +    +I+ +D+  FDPWDLP  +    ++  WYFF  ++ KY  G R  R   SG+WK TG    I    G  + +G K+ LVF   K   G K++W MHEY
Sbjct:    4 PVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVF---KNHGGSKSDWAMHEY 130          
BLAST of DY305470 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.037e-17
Identity = 49/130 (37.69%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  108 LQLPPGFRFHPTDEELVMHYLCRKCLSQPIAVP--IIAEIDLYKFDPWDLPDLALYGEKE--WYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPK-PVGIKKALVFYAGKAPKGEKTNWIMHEY 482
            ++ P G RF PTDEE+V+ YL  K   +  +     I  + + + DPW+LP  +    K+  W FF P++ KY  G +  R   SG+WK+TG  KPI + +  +G KK L+FY  K     K++W++HEY
Sbjct:    1 METPVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMRNRQQIGEKKILMFYTSKE---SKSDWVIHEY 127          
BLAST of DY305470 vs. ExPASy Swiss-Prot
Match: NAC1_ARATH (NAC domain-containing protein 1 OS=Arabidopsis thaliana GN=NAC001 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.050e-14
Identity = 56/167 (33.53%), Postives = 81/167 (48.50%), Query Frame = 3
Query:  123 GFRFHPTDEELVMHYLCRKC---LSQPIAVPIIAEIDLYKFDPWDLPDLALYGEKE--WYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI---------GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRVFYTIFILLYVRDKIDI 581
            GF F P DEELV HYL  K     S+ + V I +E+++  +DPW+L   + Y  ++  WYFF+ R+     G+R +R   SG WK TG    +         G    +G K+ LVF  G+ P   K++W++HE+    +    R        Y I  L Y  D  DI
Sbjct:    6 GFGFRPNDEELVGHYLRNKIEGNTSRDVEVAI-SEVNICSYDPWNLRFQSKYKSRDAMWYFFSRRENN--KGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFLDGRYPDKTKSDWVIHEFHYDLLPEHQRT-------YVICRLEYKGDDADI 162          
The following BLAST results are available for this feature:
BLAST of DY305470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC4_ARATH9.807e-2140.00NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC5_ARATH1.015e-1740.77NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC3_ARATH5.037e-1737.69NAC domain-containing protein 3 OS=Arabidopsis tha... [more]
NAC1_ARATH1.050e-1433.53NAC domain-containing protein 1 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AE01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305470 ID=DY305470; Name=DY305470; organism=Citrus sinensis; type=EST; length=1263bp
GGTTCTCAGAGGGTAGGAAGGTTTGGAGATAAGAACTAAACGGAGAGGGT
ACAATCAGCAACAAGAAGAAGAAATAGAAGGGCAAAAAAGTCAAAATGAC
GGCTGAGTTACAGTTACCACCAGGTTTCAGGTTCCACCCGACCGATGAGG
AGCTCGTTATGCACTATTTGTGCCGTAAATGCCTTTCGCAGCCAATCGCC
GTTCCGATTATCGCCGAAATCGATCTTTACAAATTTGATCCCTGGGACCT
CCCAGATTTGGCCCTGTACGGGGAAAAGGAGTGGTACTTTTTTACGCCTA
GGGATCGGAAGTATCCAAACGGTTCAAGGCCGAACCGGGCGGCGGGGAGC
GGGTACTGGAAGGCAACAGGAGCCGATAAGCCGATTGGCCAGCCGAAGCC
CGTTGGAATTAAGAAGGCTCTTGTTTTTTACGCCGGAAAAGCGCCTAAAG
GAGAGAAAACCAACTGGATTATGCACGAGTATCGGTTAGCTGACGTGGAT
CGCTCGGCTCGTAAGAAGAACAGCTTAAGGGTATTTTACACCATCTTCAT
CCTCCTTTATGTCAGGGATAAAATAGACATTTCATTGCATGGTGCACTGC
TCCGGACGTGCGGTCAGAAATGACAGTTTTGACCCTGCCTGTCAATTTTC
ATAATTGGCGGCCGGAATATCGTGACGCTAATGTTTTATCTAATCATGAA
GGTCAAACTGTTAAATCAAATANGGAAAATCAAAAGATCAACTGGTTCTC
ACTAATCGAATGGGCCCCACACAGAAAATCGTATGGCGATGATGCTGTGA
GTCTAATTGAACAGCACATATCATACACATTTAATATAACCTTTCAGGCA
GTGACGATGACAGAAAAGTGACTGGCCACCTCACAATTATTACATTTCTA
AATCCTAAGGAAACCATAATTAAATGGGATTCCAGATTCCATTTGGATTT
TAACATCCGTGTGGTGTATATTAATAAAAAGGTTCTTTGTCCGGTAAATT
TTAGGATTTGGAAATTATTTAATCCTTTATTAAATTGATTACAAAATGTT
CTTTGGCTTTTTAACGAAATTTCCTTTGTTTCCCCTTTCATGGGACACCC
CCTCCCCACATAAAAAAAAAGCAACAATAAGTGAGAGGGGCCCTGAATTT
GTAATTTCAAAAATATCAAAAATCCTTTGGGAGATTGGGGGGATTTATAA
TGGTTTTTTTTATTGTTTTTTTTTGCGCCCGCCCCCGGGGCCCCAATTTT
TGTGGGTGGGGCG
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