DY305462

Overview
NameDY305462
Unique NameDY305462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig580 contig Csv1_Contig580:90..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.891e-21
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 1
Query:    1 VYDYLHKNHNV-LKLSQLLRFAIDICKGMEYLHQS---NIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAA 369
            +YDY++ N +  + +  ++ +A D+ KGM YLH      +IHRDLK+ N+++    V+K+ DFG +RF N    M+   GT+ WMAPEVI      +  D +S+ +VLWE++T +VP+  +  LQ A
Sbjct:   90 LYDYINSNRSEEMDMDHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNHTTHMSL-VGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVA 215          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.387e-21
Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 1
Query:    1 VYDYLHKN--HNVLKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMT-AETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            +Y  LHK+     L   + L  A D+ KGM YLH  N  I+HRDLK+ NLL+D    VKV DFG++R +    + + +  GT  WMAPEV+  +  ++K+DV+SF ++LWEL T + P+ ++ P Q    V
Sbjct:  633 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 763          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K10_MOUSE (Mitogen-activated protein kinase kinase kinase 10 OS=Mus musculus GN=Map3k10 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.090e-20
Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSN---IIHRDLKTANLLM----DTHN----VVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            L+ +A+ + +GM YLH      IIHRDLK+ N+L+    + HN    V+K+ DFG+AR  +K   M+A  GTY WMAPEVI   L+ + +DV+SF ++LWEL+T +VPY  +  L  A GV
Sbjct:  196 LVNWAVQVARGMNYLHNDAPVPIIHRDLKSINILILEAIENHNLADTVLKITDFGLAREWHKTTKMSA-AGTYAWMAPEVIRLSLFSKSSDVWSFGVLLWELLTGEVPYREIDALAVAYGV 315          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K10_HUMAN (Mitogen-activated protein kinase kinase kinase 10 OS=Homo sapiens GN=MAP3K10 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.090e-20
Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSN---IIHRDLKTANLLM----DTHN----VVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            L+ +A+ + +GM YLH      IIHRDLK+ N+L+    + HN    V+K+ DFG+AR  +K   M+A  GTY WMAPEVI   L+ + +DV+SF ++LWEL+T +VPY  +  L  A GV
Sbjct:  196 LVNWAVQVARGMNYLHNDAPVPIIHRDLKSINILILEAIENHNLADTVLKITDFGLAREWHKTTKMSA-AGTYAWMAPEVIRLSLFSKSSDVWSFGVLLWELLTGEVPYREIDALAVAYGV 315          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: Y9871_DICDI (Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum GN=DDB_G0271682 PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.423e-20
Identity = 55/110 (50.00%), Postives = 74/110 (67.27%), Query Frame = 1
Query:   22 NHNVLKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAET--GTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVP 339
            N + L LS  ++  ID+ +GM YLH  +  IIHRDLK+ NLL+D +  VKV+DFG++RF + G   +A+T  GT  W+APEV N   Y  K DV+SF IVLWE++T K P
Sbjct:  450 NKSELSLSVKVKMLIDVAQGMNYLHTYSPPIIHRDLKSLNLLVDNNFNVKVSDFGLSRFISGGIGSSAKTFCGTLSWIAPEVFNGSGYTTKVDVYSFGIVLWEILTHKQP 559          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TNI3K_HUMAN (Serine/threonine-protein kinase TNNI3K OS=Homo sapiens GN=TNNI3K PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.427e-20
Identity = 55/128 (42.97%), Postives = 74/128 (57.81%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNK--GGVMTAETGTYRWMAPEVINH-QLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAA 369
            ++  LH+   +L L   L  A+D+ KGMEYLH     IIHRDL + N+L+       VADFG +RF        MT + G  RWMAPEV      Y  KADVFS+A+ LWE++T ++P+  + P  AA
Sbjct:  648 LFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWEILTGEIPFAHLKPAAAA 775          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: FER_MOUSE (Proto-oncogene tyrosine-protein kinase Fer OS=Mus musculus GN=Fer PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.427e-20
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:   10 YLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTA---ETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKV-PYDSMTPLQA 366
            +L K  + LKL QL+RF++D+  GM YL   N IHRDL   N L+  +N +K++DFG++R Q  GGV ++   +    +W APE +N+  Y  ++DV+SF I+LWE  +  V PY  MT  QA
Sbjct:  649 FLRKRKDELKLKQLVRFSLDVAAGMLYLESKNCIHRDLAARNCLVGENNTLKISDFGMSR-QEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQA 770          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: DLK1_CAEBR (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis briggsae GN=dlk-1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.427e-20
Identity = 45/121 (37.19%), Postives = 72/121 (59.50%), Query Frame = 1
Query:   19 KNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKG-GVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            +  N++       +  +I  GM YLHQ+ +IHRDLK+ N+L+   + +K+ DFG +  Q K    M +  GT  WMAPE+I  +  ++K DV+SF +VLWE++T + PY ++  +    GV
Sbjct:  140 RQKNLITRQMFSDWVKEIADGMHYLHQNKVIHRDLKSPNILISAEDSIKICDFGTSHLQKKNDSTMMSFCGTVSWMAPEMIKKEPCNEKVDVYSFGVVLWEMLTRETPYANIAQMAIIFGV 260          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TNI3K_RAT (Serine/threonine-protein kinase TNNI3K OS=Rattus norvegicus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 3.170e-20
Identity = 55/128 (42.97%), Postives = 74/128 (57.81%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNK--GGVMTAETGTYRWMAPEVINH-QLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAA 369
            ++  LH+   +L L   L  A+D+ KGMEYLH     IIHRDL + N+L+       VADFG +RF        MT + G  RWMAPEV      Y  KADVFS+++ LWEL+T ++P+  + P  AA
Sbjct:  547 LFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHSLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYSLCLWELLTGEIPFAHLKPAAAA 674          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.170e-20
Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   43 SQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSC 426
            S L+ +++ I  GM YLH   IIHRDLK+ N+L+   +VVK++DFG ++  +      +  GT  WMAPEVI ++   +K D++SF +VLWEL+T ++PY  +       GV   SL   + P  SSC
Sbjct:  244 SLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSL---HLPVPSSC 368          
The following BLAST results are available for this feature:
BLAST of DY305462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MLTK_HUMAN4.891e-2138.58Mitogen-activated protein kinase kinase kinase MLT... [more]
CTR1_ARATH6.387e-2141.22Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
M3K10_MOUSE1.090e-2045.45Mitogen-activated protein kinase kinase kinase 10 ... [more]
M3K10_HUMAN1.090e-2045.45Mitogen-activated protein kinase kinase kinase 10 ... [more]
Y9871_DICDI1.423e-2050.00Probable serine/threonine-protein kinase DDB_G0271... [more]
TNI3K_HUMAN2.427e-2042.97Serine/threonine-protein kinase TNNI3K OS=Homo sap... [more]
FER_MOUSE2.427e-2043.09Proto-oncogene tyrosine-protein kinase Fer OS=Mus ... [more]
DLK1_CAEBR2.427e-2037.19Mitogen-activated protein kinase kinase kinase dlk... [more]
TNI3K_RAT3.170e-2042.97Serine/threonine-protein kinase TNNI3K OS=Rattus n... [more]
M3K12_RAT3.170e-2040.63Mitogen-activated protein kinase kinase kinase 12 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305462 ID=DY305462; Name=DY305462; organism=Citrus sinensis; type=EST; length=1115bp
GTGTATGATTACTTGCATAAGAATCATAATGTCTTGAAGTTGTCTCAGTT
GCTGAGGTTTGCAATTGATATTTGCAAAGGAATGGAGTATTTGCATCAAA
GCAACATAATTCATAGGGATCTTAAAACAGCAAATTTGCTAATGGACACT
CACAATGTTGTTAAGGTGGCAGATTTTGGTGTTGCTCGGTTCCAAAACAA
AGGGGGAGTAATGACAGCCGAGACCGGAACATATAGGTGGATGGCACCAG
AGGTTATAAACCACCAGCTGTATGACCAGAAAGCAGATGTCTTCAGTTTC
GCTATCGTACTATGGGAGCTAGTGACAGCCAAGGTTCCATATGATTCCAT
GACTCCTTTACAAGCTGCCCTGGGAGTTAGACAGTGCTCTCTGAGAGGTT
AGAATGCCCCAAGATGTTCATCATGTTCAGTCAAACTGTCATGCGACTGA
ACTTATGAAATTGAATAATGCCTGACCATGTAATTAAGGAGAAGAGCATG
GAGGAAAGATGACTGCTCAAGAAATGTGTGGAAGGGAGTTGGTGCATGAG
CAAAAGAAATTTGAGCTCTAACACTTGTTCTTTTCTCTTGGAATCTTGGT
GTACTCCAACATGCTTAAGCTGCCTTGTGAAAAAAATCCCCGTGTTCATG
TCTAATTGTTACATTACACACTCTCCTTTCCAGGGACTACACCCTGATCT
TCCTGAGAATGCACACCCAAAACTTATAAACTTGATGCAGAGATGTTGGG
ATGCAATTTCTGACAATCCACCATCATTCTCTGGAAATAAACTTGAACTC
CAAGTACTTCCCCCAGAAATTCAGGAGCTGTAAATGGCAACTGGAAAACA
TAAACAATATCTCTAAACCACTCCTTAAAAGAAATCTTTGTTTTTTTTTT
GTCGGTTTAAATTTTTTATAAAGGTTTACAACTGAAAGGAAAAAAAAATT
CCAAAAGGACTTTATTTTCCCACAACATAAAAAAAAAAAAAAGGCGAGTT
CTAAAACCTTTAATTTTCCTTTTTATTTTTTTGTTTCTTTGACCGCCTTT
CCCGGTTTTAAAAATTTTTTTTTTTTTTTTAAATTTGTGGTTCCTAAAAT
TTTTTAACTCGTGTT
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