DY305462

Overview
NameDY305462
Unique NameDY305462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig580 contig Csv1_Contig580:90..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.170e-20
Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   43 SQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSC 426
            S L+ +++ I  GM YLH   IIHRDLK+ N+L+   +VVK++DFG ++  +      +  GT  WMAPEVI ++   +K D++SF +VLWEL+T ++PY  +       GV   SL   + P  SSC
Sbjct:  244 SLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSL---HLPVPSSC 368          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 3.170e-20
Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   43 SQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSC 426
            S L+ +++ I  GM YLH   IIHRDLK+ N+L+   +VVK++DFG ++  +      +  GT  WMAPEVI ++   +K D++SF +VLWEL+T ++PY  +       GV   SL   + P  SSC
Sbjct:  211 SLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSL---HLPVPSSC 335          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: FER_CANFA (Proto-oncogene tyrosine-protein kinase Fer OS=Canis familiaris GN=FER PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.170e-20
Identity = 52/123 (42.28%), Postives = 77/123 (62.60%), Query Frame = 1
Query:   10 YLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTA---ETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKV-PYDSMTPLQA 366
            +L K  + +KL QL++F++D   GM YL   N IHRDL   N L+  +NV+K++DFG++R Q  GGV ++   +    +W APE +N+  Y  ++DV+SF I+LWE  +  V PY  MT  QA
Sbjct:  648 FLRKKKDEIKLKQLVKFSLDAASGMSYLESKNCIHRDLAARNCLVGENNVLKISDFGMSR-QEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQA 769          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: YR831_MIMIV (Putative serine/threonine-protein kinase/receptor R831 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R831 PE=4 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 4.140e-20
Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = 1
Query:   19 KNHNV-LKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            KN ++ +  +  L+       G++YLH SN  I+HRD+K AN+L+D H  VK+ADFG AR +     MT   GT  W APEVI  + Y +KADVFSF +V+WE++T K P+     ++ +L +
Sbjct: 1451 KNPDIKITFANKLKLLYGAAMGIDYLHSSNPMIVHRDIKPANILVDEHFNVKIADFGFARIKEDNTTMT-RCGTPCWTAPEVIRGEKYCEKADVFSFGVVMWEVLTGKEPFAECNFMKVSLDI 1572          

HSP 2 Score: 93.5893 bits (231), Expect = 2.272e-18
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 1
Query:   52 LRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQ---NKGGVMTAETGTYRWMAPEVINH--QLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLR 396
            ++ A    KGM +LH S I+HRDLK+ NLL+D+   VKV+DFG+ + +   +K        GT  W+APE++N   ++    ADV+SF I+LWEL+T + PY  MTP   A+ V +  +R
Sbjct:  886 IKMAYQASKGMHFLHSSGIVHRDLKSLNLLLDSKWNVKVSDFGLTKVKSELDKKKTNDNIIGTIHWIAPEILNDSTEVDYILADVYSFGIILWELLTREQPYKGMTPAAIAVSVIRDGMR 1005          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: FER_RAT (Proto-oncogene tyrosine-protein kinase Fer (Fragment) OS=Rattus norvegicus GN=Fer PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.140e-20
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:   10 YLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTA---ETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKV-PYDSMTPLQA 366
            +L K  + LKL QL+RF++D+  GM YL   N IHRDL   N L+  +N +K++DFG++R Q  GGV ++   +    +W APE +N+  Y  ++DV+SF I+LWE  +  V PY  MT  QA
Sbjct:  149 FLRKRKDELKLKQLVRFSLDVAAGMLYLEGKNCIHRDLAARNCLVGENNTLKISDFGMSR-QEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQA 270          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.140e-20
Identity = 63/159 (39.62%), Postives = 81/159 (50.94%), Query Frame = 1
Query:   52 LRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSCSVKLSCD*TYEIE*CLTM*LRRRAWRKDDCSR 522
            L+   D  +GM YLH  N  IIHRDLKT NLL+D    VKVADFG+A  ++     T   GT  W+APEV+  + Y +KADV+S+AIVLWEL+T  +PY     +Q    +     RG   P  + C  K +              L  R W  D   R
Sbjct:  950 LQLGFDCARGMTYLHSRNPIIIHRDLKTDNLLVDDSWQVKVADFGLATVKSHTFAKTM-CGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLTRLIPYAGKNTMQVVRSID----RGERLPMPAWCPPKYAA-------------LMNRCWETDPTHR 1090          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 7.062e-20
Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNK--GGVMTAETGTYRWMAPEVINH-QLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAA 369
            ++  LH+   +L L   L  A+D+ KGMEYLH     IIHRDL + N+L+       VADFG +RF        MT + G  RWMAPEV      Y  KADVFS+A+ LWEL+  ++P+  + P  AA
Sbjct:  546 LFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHSLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLIGEIPFAHLKPAAAA 673          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 9.223e-20
Identity = 50/112 (44.64%), Postives = 73/112 (65.18%), Query Frame = 1
Query:   52 LRFAIDICKGMEYLH----QSNIIHRDLKTANLLMDT-HNVVKVADFGVARFQNKGGV-MTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAA 369
            L  A DI +GM YLH    +  I+HRDL ++N+L+++ + V K+ DFG+++    G   MTA  G+  WMAPE    + Y +K DV+SFAI+LWE+VT + PY+ M PL+ A
Sbjct:  281 LSIARDIAEGMNYLHTNFKEGPIVHRDLTSSNILLNSSYTVAKINDFGLSKEMKPGPTEMTAAMGSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDPYNGMEPLRLA 392          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: FER_HUMAN (Proto-oncogene tyrosine-protein kinase Fer OS=Homo sapiens GN=FER PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.205e-19
Identity = 52/123 (42.28%), Postives = 77/123 (62.60%), Query Frame = 1
Query:   10 YLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTA---ETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKV-PYDSMTPLQA 366
            +L +  + LKL QL++F++D   GM YL   N IHRDL   N L+  +NV+K++DFG++R Q  GGV ++   +    +W APE +N+  Y  ++DV+SF I+LWE  +  V PY  MT  QA
Sbjct:  648 FLRRKKDELKLKQLVKFSLDAAAGMLYLESKNCIHRDLAARNCLVGENNVLKISDFGMSR-QEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQA 769          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SHKB_DICDI (Dual specificity protein kinase shkB OS=Dictyostelium discoideum GN=shkB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.578e-19
Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQ--NKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSM 351
            +   + +  A D   GM +LH SNI+H DLK ANLL+D + VVKVADFG++++   +    +  + G+  +MAPE++ +Q YD K DVFSF+I+LWEL+T + PY+ +
Sbjct:  270 ITFKRAILIARDTVLGMTWLHASNILHLDLKPANLLVDQNWVVKVADFGLSKYMKPDSKDKLLGQAGSPLYMAPEMLVNQPYDGKVDVFSFSILLWELLTKQEPYNKL 377          
The following BLAST results are available for this feature:
BLAST of DY305462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K12_MOUSE3.170e-2040.63Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN3.170e-2040.63Mitogen-activated protein kinase kinase kinase 12 ... [more]
FER_CANFA3.170e-2042.28Proto-oncogene tyrosine-protein kinase Fer OS=Cani... [more]
YR831_MIMIV4.140e-2042.28Putative serine/threonine-protein kinase/receptor ... [more]
FER_RAT4.140e-2043.09Proto-oncogene tyrosine-protein kinase Fer (Fragme... [more]
DRKD_DICDI4.140e-2039.62Probable serine/threonine-protein kinase drkD OS=D... [more]
TNI3K_MOUSE7.062e-2042.97Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
YTYK2_DICDI9.223e-2044.64Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
FER_HUMAN1.205e-1942.28Proto-oncogene tyrosine-protein kinase Fer OS=Homo... [more]
SHKB_DICDI4.578e-1944.44Dual specificity protein kinase shkB OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305462 ID=DY305462; Name=DY305462; organism=Citrus sinensis; type=EST; length=1115bp
GTGTATGATTACTTGCATAAGAATCATAATGTCTTGAAGTTGTCTCAGTT
GCTGAGGTTTGCAATTGATATTTGCAAAGGAATGGAGTATTTGCATCAAA
GCAACATAATTCATAGGGATCTTAAAACAGCAAATTTGCTAATGGACACT
CACAATGTTGTTAAGGTGGCAGATTTTGGTGTTGCTCGGTTCCAAAACAA
AGGGGGAGTAATGACAGCCGAGACCGGAACATATAGGTGGATGGCACCAG
AGGTTATAAACCACCAGCTGTATGACCAGAAAGCAGATGTCTTCAGTTTC
GCTATCGTACTATGGGAGCTAGTGACAGCCAAGGTTCCATATGATTCCAT
GACTCCTTTACAAGCTGCCCTGGGAGTTAGACAGTGCTCTCTGAGAGGTT
AGAATGCCCCAAGATGTTCATCATGTTCAGTCAAACTGTCATGCGACTGA
ACTTATGAAATTGAATAATGCCTGACCATGTAATTAAGGAGAAGAGCATG
GAGGAAAGATGACTGCTCAAGAAATGTGTGGAAGGGAGTTGGTGCATGAG
CAAAAGAAATTTGAGCTCTAACACTTGTTCTTTTCTCTTGGAATCTTGGT
GTACTCCAACATGCTTAAGCTGCCTTGTGAAAAAAATCCCCGTGTTCATG
TCTAATTGTTACATTACACACTCTCCTTTCCAGGGACTACACCCTGATCT
TCCTGAGAATGCACACCCAAAACTTATAAACTTGATGCAGAGATGTTGGG
ATGCAATTTCTGACAATCCACCATCATTCTCTGGAAATAAACTTGAACTC
CAAGTACTTCCCCCAGAAATTCAGGAGCTGTAAATGGCAACTGGAAAACA
TAAACAATATCTCTAAACCACTCCTTAAAAGAAATCTTTGTTTTTTTTTT
GTCGGTTTAAATTTTTTATAAAGGTTTACAACTGAAAGGAAAAAAAAATT
CCAAAAGGACTTTATTTTCCCACAACATAAAAAAAAAAAAAAGGCGAGTT
CTAAAACCTTTAATTTTCCTTTTTATTTTTTTGTTTCTTTGACCGCCTTT
CCCGGTTTTAAAAATTTTTTTTTTTTTTTTAAATTTGTGGTTCCTAAAAT
TTTTTAACTCGTGTT
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