DY305462

Overview
NameDY305462
Unique NameDY305462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig580 contig Csv1_Contig580:90..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K13_MOUSE (Mitogen-activated protein kinase kinase kinase 13 OS=Mus musculus GN=Map3k13 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.978e-19
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSC 426
            L+ ++  I  GM YLH   IIHRDLK+ N+L+   + VK++DFG ++  +      +  GT  WMAPEVI ++   +K D++SF +VLWEL+T ++PY  +       GV   SL   + P  S+C
Sbjct:  255 LVDWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSL---HLPVPSTC 377          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K13_HUMAN (Mitogen-activated protein kinase kinase kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.978e-19
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSC 426
            L+ ++  I  GM YLH   IIHRDLK+ N+L+   + VK++DFG ++  +      +  GT  WMAPEVI ++   +K D++SF +VLWEL+T ++PY  +       GV   SL   + P  S+C
Sbjct:  256 LVDWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSL---HLPVPSTC 378          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K13_BOVIN (Mitogen-activated protein kinase kinase kinase 13 OS=Bos taurus GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.978e-19
Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSC 426
            L+ ++  I  GM YLH   IIHRDLK+ N+L+   + VK++DFG ++  +      +  GT  WMAPEVI ++   +K D++SF +VLWEL+T ++PY  +       GV   SL   + P  S+C
Sbjct:  256 LVDWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSL---HLPVPSTC 378          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.808e-19
Identity = 50/117 (42.74%), Postives = 74/117 (63.25%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            LK+  L + A+    G+ YLH S+  IIHRD+K +N+L+D    VK+ADFG AR + +  VMT   GT  W APE+I  + Y +K DVFSF IV+WE++T K P+     ++ ++ +
Sbjct: 1489 LKIKMLYQTAL----GIGYLHNSDPIIIHRDIKPSNILVDDSMNVKIADFGFARIKEENSVMT-RCGTPCWTAPEIIRGEKYTEKVDVFSFGIVMWEVLTCKEPFSGCNFMKVSMDI 1600          

HSP 2 Score: 91.6633 bits (226), Expect = 8.633e-18
Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 1
Query:   52 LRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQ--NKGGVMTAETG--TYRWMAPEVINHQ--LYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLR 396
            +R A    KGM +LH S+I+HRDLK+ NLL+D+   VKV+DFG+ + +  NKG   T E    + +W APEV++ +  +    ADV+SF I++WEL+T   PY  ++P   A+ V + +LR
Sbjct:  893 IRIAYQAAKGMHFLHSSDIVHRDLKSLNLLLDSKWNVKVSDFGLTKIKDNNKGKSSTKEDSVCSIQWTAPEVLSEKQDIDYILADVYSFGIIMWELMTRLRPYIGLSPAAIAVAVIRDNLR 1013          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K11_RAT (Mitogen-activated protein kinase kinase kinase 11 OS=Rattus norvegicus GN=Map3k11 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.808e-19
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSN---IIHRDLKTANLLM--------DTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            L+ +A+ I +GM YLH      +IHRDLK+ N+L+          H  +K+ DFG+AR  +K   M+A  GTY WMAPEVI    + + +DV+SF ++LWEL+T +VPY  +  L  A GV
Sbjct:  216 LVNWAVQIARGMHYLHCEALVPVIHRDLKSNNILLLQPIEGDDMEHKTLKITDFGLAREWHKTTQMSA-AGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGV 335          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K11_MOUSE (Mitogen-activated protein kinase kinase kinase 11 OS=Mus musculus GN=Map3k11 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.808e-19
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSN---IIHRDLKTANLLM--------DTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            L+ +A+ I +GM YLH      +IHRDLK+ N+L+          H  +K+ DFG+AR  +K   M+A  GTY WMAPEVI    + + +DV+SF ++LWEL+T +VPY  +  L  A GV
Sbjct:  216 LVNWAVQIARGMHYLHCEALVPVIHRDLKSNNILLLQPIEGDDMEHKTLKITDFGLAREWHKTTQMSA-AGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGV 335          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3K11_HUMAN (Mitogen-activated protein kinase kinase kinase 11 OS=Homo sapiens GN=MAP3K11 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.808e-19
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSN---IIHRDLKTANLLM--------DTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            L+ +A+ I +GM YLH      +IHRDLK+ N+L+          H  +K+ DFG+AR  +K   M+A  GTY WMAPEVI    + + +DV+SF ++LWEL+T +VPY  +  L  A GV
Sbjct:  215 LVNWAVQIARGMHYLHCEALVPVIHRDLKSNNILLLQPIESDDMEHKTLKITDFGLAREWHKTTQMSA-AGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGV 334          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.808e-19
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSC 426
            L+ ++  I  GM YLH   IIHRDLK+ N+L+   + VK++DFG ++  +      +  GT  WMAPEVI ++   +K D++SF ++LWEL+T ++PY  +       GV   SL   + P  S+C
Sbjct:  259 LVEWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHADTVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIPYKDVDSSAIIWGVGSNSL---HLPVPSTC 381          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SRK1_SPOLA (Tyrosine-protein kinase isoform SRK1 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.332e-18
Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = 1
Query:    7 DYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGT---YRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMT 354
            +YL     VLK+ QL+  A  +  GM YL Q N IHRDL   N+L+  H + KVADFG+AR  ++  +  A TG     +W APE   +  +  K+DV+SF +VL+E++T  + PY  MT
Sbjct:  322 EYLRGEDGVLKIEQLVDVAAQVASGMSYLEQQNYIHRDLAARNILVGEHGICKVADFGLARVIDE-EIYEAHTGAKFPIKWTAPEAAMYNRFTIKSDVWSFGVVLYEIITYGRFPYPGMT 440          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: M3KSL_DROME (Mitogen-activated protein kinase kinase kinase OS=Drosophila melanogaster GN=slpr PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.332e-18
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 1
Query:   49 LLRFAIDICKGMEYLHQS---NIIHRDLKTANLLMDT--------HNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGV 378
            L+ +AI I +GM YLH     +IIHRDLK++N+L+             +K+ DFG+AR       M+A  GTY WM PEVI+   Y + +DV+S+ ++LWEL+T + PY    PL  A GV
Sbjct:  238 LVNWAIQIARGMNYLHNEAPMSIIHRDLKSSNVLIYEAIEGNHLQQKTLKITDFGLAREMYNTQRMSA-AGTYAWMPPEVISVSTYSKFSDVWSYGVLLWELITGETPYKGFDPLSVAYGV 357          
The following BLAST results are available for this feature:
BLAST of DY305462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K13_MOUSE5.978e-1938.89Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_HUMAN5.978e-1938.89Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_BOVIN5.978e-1938.89Mitogen-activated protein kinase kinase kinase 13 ... [more]
YR818_MIMIV7.808e-1942.74Putative serine/threonine-protein kinase/receptor ... [more]
M3K11_RAT7.808e-1942.98Mitogen-activated protein kinase kinase kinase 11 ... [more]
M3K11_MOUSE7.808e-1942.98Mitogen-activated protein kinase kinase kinase 11 ... [more]
M3K11_HUMAN7.808e-1942.98Mitogen-activated protein kinase kinase kinase 11 ... [more]
M313B_XENLA7.808e-1938.10Mitogen-activated protein kinase kinase kinase 13-... [more]
SRK1_SPOLA1.332e-1841.67Tyrosine-protein kinase isoform SRK1 OS=Spongilla ... [more]
M3KSL_DROME1.332e-1842.15Mitogen-activated protein kinase kinase kinase OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305462 ID=DY305462; Name=DY305462; organism=Citrus sinensis; type=EST; length=1115bp
GTGTATGATTACTTGCATAAGAATCATAATGTCTTGAAGTTGTCTCAGTT
GCTGAGGTTTGCAATTGATATTTGCAAAGGAATGGAGTATTTGCATCAAA
GCAACATAATTCATAGGGATCTTAAAACAGCAAATTTGCTAATGGACACT
CACAATGTTGTTAAGGTGGCAGATTTTGGTGTTGCTCGGTTCCAAAACAA
AGGGGGAGTAATGACAGCCGAGACCGGAACATATAGGTGGATGGCACCAG
AGGTTATAAACCACCAGCTGTATGACCAGAAAGCAGATGTCTTCAGTTTC
GCTATCGTACTATGGGAGCTAGTGACAGCCAAGGTTCCATATGATTCCAT
GACTCCTTTACAAGCTGCCCTGGGAGTTAGACAGTGCTCTCTGAGAGGTT
AGAATGCCCCAAGATGTTCATCATGTTCAGTCAAACTGTCATGCGACTGA
ACTTATGAAATTGAATAATGCCTGACCATGTAATTAAGGAGAAGAGCATG
GAGGAAAGATGACTGCTCAAGAAATGTGTGGAAGGGAGTTGGTGCATGAG
CAAAAGAAATTTGAGCTCTAACACTTGTTCTTTTCTCTTGGAATCTTGGT
GTACTCCAACATGCTTAAGCTGCCTTGTGAAAAAAATCCCCGTGTTCATG
TCTAATTGTTACATTACACACTCTCCTTTCCAGGGACTACACCCTGATCT
TCCTGAGAATGCACACCCAAAACTTATAAACTTGATGCAGAGATGTTGGG
ATGCAATTTCTGACAATCCACCATCATTCTCTGGAAATAAACTTGAACTC
CAAGTACTTCCCCCAGAAATTCAGGAGCTGTAAATGGCAACTGGAAAACA
TAAACAATATCTCTAAACCACTCCTTAAAAGAAATCTTTGTTTTTTTTTT
GTCGGTTTAAATTTTTTATAAAGGTTTACAACTGAAAGGAAAAAAAAATT
CCAAAAGGACTTTATTTTCCCACAACATAAAAAAAAAAAAAAGGCGAGTT
CTAAAACCTTTAATTTTCCTTTTTATTTTTTTGTTTCTTTGACCGCCTTT
CCCGGTTTTAAAAATTTTTTTTTTTTTTTTAAATTTGTGGTTCCTAAAAT
TTTTTAACTCGTGTT
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