DY305462

Overview
NameDY305462
Unique NameDY305462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig580 contig Csv1_Contig580:90..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: AAPK2_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 2.200e-13
Identity = 37/116 (31.90%), Postives = 69/116 (59.48%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLY-DQKADVFSFAIVLWELVTAKVPYD 345
            ++DY+ K+  V ++ +  R    I   ++Y H+  ++HRDLK  N+L+D H   K+ADFG++   + G  +    G+  + APEVI+ +LY   + D++S  ++L+ L+   +P+D
Sbjct:  101 LFDYICKHGRVEEM-EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 215          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 44/121 (36.36%), Postives = 70/121 (57.85%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQS---NIIHRDLKTANLLMDTHNVVKVADFGVARF----QNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAK-VPYDSMTPLQAAL 372
            L   + L   I   +G++YLH      IIHRD+KT N+L+D + V KV+DFG++R      ++  V T   GT+ ++ PE    Q+  +K+DV+SF +VL E++  + +   S+ P QA L
Sbjct:  615 LSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADL 735          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: Y2350_DICDI (Probable serine/threonine-protein kinase DDB_G0292350 OS=Dictyostelium discoideum GN=DDB_G0292350 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   22 NHNVLKLSQ--LLRFAI-DICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQA 366
            N N L+L +  L+ + I ++ +G+ YL    IIHRDLK+ N+L+     VK+ADFG+A   + G   T   GT   +APEVI  + YD ++D++S   ++ E+    VPY   + L+A
Sbjct: 1028 NPNNLQLFEETLIAYIITELLEGLVYLRSKGIIHRDLKSRNILLTRKGKVKIADFGLATTCSLGRGRTRMCGTMGRIAPEVIRREPYDTQSDIYSLGCLIIEMAEGTVPYGKDSSLKA 1145          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   22 NHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVA-RFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQ 384
            N      S +  +  ++ KG+ YLHQ  +IHRD+K AN+L++     K++DFG A     +     +  GT  WMAPEVI    + Q +D++S    + EL T+  PY  + PL A   + Q
Sbjct:  167 NFGTFPESLICNYVENVLKGLVYLHQEGVIHRDIKAANILINKAGEAKLSDFGTAGEIIKESDKRYSVVGTPYWMAPEVIEISGHCQVSDIWSLGCTIIELFTSYPPYFDLNPLGAMYRICQ 288          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: STK3_DANRE (Serine/threonine-protein kinase 3 OS=Danio rerio GN=stk3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 44/123 (35.77%), Postives = 63/123 (51.22%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVA-RFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQA 366
            V D +   +  L   ++        KG+EYLH    IHRD+K  N+L++T    K+ADFGVA +  +         GT  WMAPEVI    Y+  AD++S  I   E+   K PY  + P++A
Sbjct:  106 VSDIIRLRNKTLTEDEIATVLKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRA 228          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SRK3_SPOLA (Tyrosine-protein kinase SRK3 (Fragment) OS=Spongilla lacustris GN=SRK3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 1
Query:    7 DYL-HKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGT---YRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSC-----SVKLSC 444
            +YL H     + L Q++  +  I  GM YL   + IHRDL   N+L+   NV KVADFG+AR   K  +     GT    +W APE   +  +  K+DV+SF +++ E+VT  ++PY  MT  Q    V +   RG   P    C      + LSC
Sbjct:  148 EYLKHGEGKNITLHQMVDMSAQIASGMTYLEAHSYIHRDLAARNILVGEGNVCKVADFGLARV-IKEDIYNPREGTKFPIKWTAPEAALYNRFTIKSDVWSFGVLISEIVTHGRMPYPGMTNRQ----VLEAVDRGYRMPCPEGCPDPLYKIMLSC 298          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 41/116 (35.34%), Postives = 67/116 (57.76%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQLYD-QKADVFSFAIVLWELVTAKVPYD 345
            ++DYL  N ++ +     +F   I   +EY H  +I+HRDLKT NLL+D +  +K+ADFG   F   G  ++   G+  + APEV   + Y+  + D++S  +VL+ LV   +P+D
Sbjct:  111 MFDYLTSNGHLSENEARKKFW-QILSAVEYCHDHHIVHRDLKTENLLLDGNMDIKLADFGFGNFYKSGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFD 225          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RIPK2_MOUSE (Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Ripk2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 48/142 (33.80%), Postives = 81/142 (57.04%), Query Frame = 1
Query:    7 DYLHKNHNVLKLSQLLRFAI--DICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARF------QNKGGVMTAETGTYRWMAPEVINHQLYDQ-----KADVFSFAIVLWELVTAKVPYDSMT-PLQAALGVRQ 384
            + LH+      ++  LRF I  +I  G+ YLH  N  ++H DLKT N+L+D    VK+ADFG++++      Q++      E GT  +M PE  N++   +     K D++S+A+++WE+++ K P++ +T PLQ    V Q
Sbjct:  105 ELLHRKTEYPDIAWPLRFRILHEIALGVNYLHNMNPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSYKSAPEGGTIIYMPPE--NYEPGQKSRASVKHDIYSYAVIMWEVLSRKQPFEEVTNPLQIMYSVSQ 244          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RIPK2_BOVIN (Receptor-interacting serine/threonine-protein kinase 2 OS=Bos taurus GN=RIPK2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 1
Query:    7 DYLHKNHNVLKLSQLLRFAI--DICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARF------QNKGGVMTAETGTYRWMAPEVINHQLYDQ-----KADVFSFAIVLWELVTAKVPYDSMT-PLQAALGVRQ 384
            + LH+      +   LRF I  +I  G+ YLH  N  ++H DLKT N+L+D    VK+ADFG++++      Q++      E GT  +M PE  N++   +     K D++S+AI++WE+++ K P++ +T PLQ    V Q
Sbjct:  105 ELLHRKIEYPDVPWPLRFRILHEIALGVNYLHNMNPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIVYMPPE--NYEPGQKARASVKHDIYSYAIIIWEVLSRKQPFEDVTNPLQIMYSVSQ 244          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 54/148 (36.49%), Postives = 77/148 (52.03%), Query Frame = 1
Query:   31 VLKLSQLLRFAIDICKGMEYLH---QSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAET------GTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSCSVKLSCD 447
            VL  +Q ++ A+   KG+EYLH   Q +IIHRD+K++N+L+   +V K+ADF ++   N+   M A        GT+ + APE         K+DV+SF +VL EL+T + P D   P        Q SL     PR S   VK   D
Sbjct:  166 VLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPR------GQQSLVTWATPRLSEDKVKQCVD 304          
The following BLAST results are available for this feature:
BLAST of DY305462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAPK2_HUMAN2.200e-1331.905'-AMP-activated protein kinase catalytic subunit ... [more]
Y5900_ARATH2.874e-1336.36Putative receptor-like protein kinase At5g39000 OS... [more]
Y2350_DICDI2.874e-1337.29Probable serine/threonine-protein kinase DDB_G0292... [more]
Y0146_DICDI2.874e-1334.43Probable serine/threonine-protein kinase DDB_G0270... [more]
STK3_DANRE2.874e-1335.77Serine/threonine-protein kinase 3 OS=Danio rerio G... [more]
SRK3_SPOLA2.874e-1335.26Tyrosine-protein kinase SRK3 (Fragment) OS=Spongil... [more]
SIK1_HUMAN2.874e-1335.34Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
RIPK2_MOUSE2.874e-1333.80Receptor-interacting serine/threonine-protein kina... [more]
RIPK2_BOVIN2.874e-1334.51Receptor-interacting serine/threonine-protein kina... [more]
PTI1_SOLLC2.874e-1336.49Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305462 ID=DY305462; Name=DY305462; organism=Citrus sinensis; type=EST; length=1115bp
GTGTATGATTACTTGCATAAGAATCATAATGTCTTGAAGTTGTCTCAGTT
GCTGAGGTTTGCAATTGATATTTGCAAAGGAATGGAGTATTTGCATCAAA
GCAACATAATTCATAGGGATCTTAAAACAGCAAATTTGCTAATGGACACT
CACAATGTTGTTAAGGTGGCAGATTTTGGTGTTGCTCGGTTCCAAAACAA
AGGGGGAGTAATGACAGCCGAGACCGGAACATATAGGTGGATGGCACCAG
AGGTTATAAACCACCAGCTGTATGACCAGAAAGCAGATGTCTTCAGTTTC
GCTATCGTACTATGGGAGCTAGTGACAGCCAAGGTTCCATATGATTCCAT
GACTCCTTTACAAGCTGCCCTGGGAGTTAGACAGTGCTCTCTGAGAGGTT
AGAATGCCCCAAGATGTTCATCATGTTCAGTCAAACTGTCATGCGACTGA
ACTTATGAAATTGAATAATGCCTGACCATGTAATTAAGGAGAAGAGCATG
GAGGAAAGATGACTGCTCAAGAAATGTGTGGAAGGGAGTTGGTGCATGAG
CAAAAGAAATTTGAGCTCTAACACTTGTTCTTTTCTCTTGGAATCTTGGT
GTACTCCAACATGCTTAAGCTGCCTTGTGAAAAAAATCCCCGTGTTCATG
TCTAATTGTTACATTACACACTCTCCTTTCCAGGGACTACACCCTGATCT
TCCTGAGAATGCACACCCAAAACTTATAAACTTGATGCAGAGATGTTGGG
ATGCAATTTCTGACAATCCACCATCATTCTCTGGAAATAAACTTGAACTC
CAAGTACTTCCCCCAGAAATTCAGGAGCTGTAAATGGCAACTGGAAAACA
TAAACAATATCTCTAAACCACTCCTTAAAAGAAATCTTTGTTTTTTTTTT
GTCGGTTTAAATTTTTTATAAAGGTTTACAACTGAAAGGAAAAAAAAATT
CCAAAAGGACTTTATTTTCCCACAACATAAAAAAAAAAAAAAGGCGAGTT
CTAAAACCTTTAATTTTCCTTTTTATTTTTTTGTTTCTTTGACCGCCTTT
CCCGGTTTTAAAAATTTTTTTTTTTTTTTTAAATTTGTGGTTCCTAAAAT
TTTTTAACTCGTGTT
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