DY305462

Overview
NameDY305462
Unique NameDY305462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1115
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig580 contig Csv1_Contig580:90..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RAF1_PONAB (RAF proto-oncogene serine/threonine-protein kinase OS=Pongo abelii GN=RAF1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAE--TGTYRWMAPEVINHQ---LYDQKADVFSFAIVLWELVTAKVPY 342
            +Y +LH      ++ QL+  A    +GM+YLH  NIIHRD+K+ N+ +     VK+ DFG+A  +++  G    E  TG+  WMAPEVI  Q    +  ++DV+S+ IVL+EL+T ++PY
Sbjct:  429 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 548          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RAF1_HUMAN (RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAE--TGTYRWMAPEVINHQ---LYDQKADVFSFAIVLWELVTAKVPY 342
            +Y +LH      ++ QL+  A    +GM+YLH  NIIHRD+K+ N+ +     VK+ DFG+A  +++  G    E  TG+  WMAPEVI  Q    +  ++DV+S+ IVL+EL+T ++PY
Sbjct:  429 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 548          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RAF1_CHICK (RAF proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAE--TGTYRWMAPEVINHQ---LYDQKADVFSFAIVLWELVTAKVPY 342
            +Y +LH      ++ QL+  A    +GM+YLH  NIIHRD+K+ N+ +     VK+ DFG+A  +++  G    E  TG+  WMAPEVI  Q    +  ++DV+S+ IVL+EL+T ++PY
Sbjct:  429 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPY 548          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: RAF1_BOVIN (RAF proto-oncogene serine/threonine-protein kinase OS=Bos taurus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAE--TGTYRWMAPEVINHQ---LYDQKADVFSFAIVLWELVTAKVPY 342
            +Y +LH      ++ QL+  A    +GM+YLH  NIIHRD+K+ N+ +     VK+ DFG+A  +++  G    E  TG+  WMAPEVI  Q    +  ++DV+S+ IVL+EL+T ++PY
Sbjct:  429 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 548          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-17
Identity = 49/114 (42.98%), Postives = 67/114 (58.77%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTYRWMAPEVINHQL----YDQKADVFSFAIVLWELVTAKVPYDSMTPLQ 363
            L  SQ+     +  KG+EYLH +N+IHRDLK AN+L+     VK+ADFGV+   +K        GT  WMAPEVI ++     YD KAD++S  I L EL  A+ P   + P++
Sbjct:  113 LNESQIAYVCRETLKGLEYLHHTNVIHRDLKGANILLTESGDVKLADFGVSGLLDKSSKRNTFIGTPYWMAPEVIENRSNPVPYDTKADIWSLGITLIELAEAEPPLSEIHPMK 226          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SKM1_YEAST (Serine/threonine-protein kinase SKM1 OS=Saccharomyces cerevisiae GN=SKM1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.512e-17
Identity = 42/112 (37.50%), Postives = 68/112 (60.71%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVA-RFQNKGGVMTAETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVTAKVPYDSMTPLQA 366
            L  +Q+     + C+G+++LH   IIHRD+K+ N+L+++  +VK+ DFG       K        GT  WMAPE++N + YD+K DV+S  I+L E++  + PY +  PL+A
Sbjct:  479 LNENQMAYIVKETCQGLKFLHNKKIIHRDIKSDNILLNSQGLVKITDFGFCVELTEKRSKRATMVGTPYWMAPEIVNQKGYDEKVDVWSLGIMLIEMIEGEPPYLNEDPLKA 590          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: MIL_AVIMH (Serine/threonine-protein kinase-transforming protein mil OS=Avian retrovirus MH2 GN=V-MIL PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.512e-17
Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 VYDYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNK-GGVMTAE--TGTYRWMAPEVINHQ---LYDQKADVFSFAIVLWELVTAKVPY 342
            +Y +LH      ++ QL+  A    +GM+YLH  NIIHRD+K+ N+ +     VK+ DFG+A  +++  G    E  TG+  WMAPEVI  Q    +  ++DV+S+ IVL+EL+T ++PY
Sbjct:  162 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHGGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPY 281          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SHKA_DICDI (Dual specificity protein kinase shkA OS=Dictyostelium discoideum GN=shkA PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.281e-17
Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQSN--IIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMT----AETGTYRWMAPEVINHQLYDQKADVFSFAIVLWELVT 327
            L L   +R A D   G+ +LH SN   IHRDLKT+NLL+D +  VKV DFG+++ + +G  +        GT  WMAPEV+  +L+++KADV+SF +VLW++ T
Sbjct:  137 LPLITRMRMAKDAALGVLWLHSSNPVFIHRDLKTSNLLVDANLTVKVCDFGLSQIKQRGENLKDGQDGAKGTPLWMAPEVLQGRLFNEKADVYSFGLVLWQIFT 240          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: SRMS_HUMAN (Tyrosine-protein kinase Srms OS=Homo sapiens GN=SRMS PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.284e-17
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 1
Query:   34 LKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGT---YRWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMTPLQAALGVRQCSLRG*NAPRCSSCSVKL 438
            L+L  LL FA  + +GM YL +  ++HRDL   N+L+D     KVADFG+AR   K  + +  + +    +W APE  N++++ QK+DV+SF ++L E+ T  + PY+ MT  +      Q  +RG   PR ++C  ++
Sbjct:  322 LRLPPLLGFACQVAEGMSYLEEQRVVHRDLAARNVLVDDGLACKVADFGLARLL-KDDIYSPSSSSKIPVKWTAPEAANYRVFSQKSDVWSFGVLLHEVFTYGQCPYEGMTNHETL----QQIMRGYRLPRPAACPAEV 455          
BLAST of DY305462 vs. ExPASy Swiss-Prot
Match: TXK_HUMAN (Tyrosine-protein kinase TXK OS=Homo sapiens GN=TXK PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 5.596e-17
Identity = 44/129 (34.11%), Postives = 75/129 (58.14%), Query Frame = 1
Query:    7 DYLHKNHNVLKLSQLLRFAIDICKGMEYLHQSNIIHRDLKTANLLMDTHNVVKVADFGVARFQNKGGVMTAETGTY--RWMAPEVINHQLYDQKADVFSFAIVLWELVT-AKVPYDSMTPLQAALGVRQ 384
            +YL +N   L+   LL    DIC+GMEYL ++  IHRDL   N L+ +  +VK++DFG+ R+      +++    +  +W  PEV     Y  K+DV+SF +++WE+ T  K+P+++ + LQ    + +
Sbjct:  353 NYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVSSTCIVKISDFGMTRYVLDDEYVSSFGAKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISE 481          
The following BLAST results are available for this feature:
BLAST of DY305462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAF1_PONAB1.923e-1740.00RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_HUMAN1.923e-1740.00RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_CHICK1.923e-1740.00RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_BOVIN1.923e-1740.00RAF proto-oncogene serine/threonine-protein kinase... [more]
DST2_DICDI1.923e-1742.98Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]
SKM1_YEAST2.512e-1737.50Serine/threonine-protein kinase SKM1 OS=Saccharomy... [more]
MIL_AVIMH2.512e-1740.00Serine/threonine-protein kinase-transforming prote... [more]
SHKA_DICDI3.281e-1745.19Dual specificity protein kinase shkA OS=Dictyostel... [more]
SRMS_HUMAN4.284e-1735.97Tyrosine-protein kinase Srms OS=Homo sapiens GN=SR... [more]
TXK_HUMAN5.596e-1734.11Tyrosine-protein kinase TXK OS=Homo sapiens GN=TXK... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305462 ID=DY305462; Name=DY305462; organism=Citrus sinensis; type=EST; length=1115bp
GTGTATGATTACTTGCATAAGAATCATAATGTCTTGAAGTTGTCTCAGTT
GCTGAGGTTTGCAATTGATATTTGCAAAGGAATGGAGTATTTGCATCAAA
GCAACATAATTCATAGGGATCTTAAAACAGCAAATTTGCTAATGGACACT
CACAATGTTGTTAAGGTGGCAGATTTTGGTGTTGCTCGGTTCCAAAACAA
AGGGGGAGTAATGACAGCCGAGACCGGAACATATAGGTGGATGGCACCAG
AGGTTATAAACCACCAGCTGTATGACCAGAAAGCAGATGTCTTCAGTTTC
GCTATCGTACTATGGGAGCTAGTGACAGCCAAGGTTCCATATGATTCCAT
GACTCCTTTACAAGCTGCCCTGGGAGTTAGACAGTGCTCTCTGAGAGGTT
AGAATGCCCCAAGATGTTCATCATGTTCAGTCAAACTGTCATGCGACTGA
ACTTATGAAATTGAATAATGCCTGACCATGTAATTAAGGAGAAGAGCATG
GAGGAAAGATGACTGCTCAAGAAATGTGTGGAAGGGAGTTGGTGCATGAG
CAAAAGAAATTTGAGCTCTAACACTTGTTCTTTTCTCTTGGAATCTTGGT
GTACTCCAACATGCTTAAGCTGCCTTGTGAAAAAAATCCCCGTGTTCATG
TCTAATTGTTACATTACACACTCTCCTTTCCAGGGACTACACCCTGATCT
TCCTGAGAATGCACACCCAAAACTTATAAACTTGATGCAGAGATGTTGGG
ATGCAATTTCTGACAATCCACCATCATTCTCTGGAAATAAACTTGAACTC
CAAGTACTTCCCCCAGAAATTCAGGAGCTGTAAATGGCAACTGGAAAACA
TAAACAATATCTCTAAACCACTCCTTAAAAGAAATCTTTGTTTTTTTTTT
GTCGGTTTAAATTTTTTATAAAGGTTTACAACTGAAAGGAAAAAAAAATT
CCAAAAGGACTTTATTTTCCCACAACATAAAAAAAAAAAAAAGGCGAGTT
CTAAAACCTTTAATTTTCCTTTTTATTTTTTTGTTTCTTTGACCGCCTTT
CCCGGTTTTAAAAATTTTTTTTTTTTTTTTAAATTTGTGGTTCCTAAAAT
TTTTTAACTCGTGTT
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