DY305457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: CAIC_SHISS (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella sonnei (strain Ss046) GN=caiC PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 7.115e-11 Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 2 Query: 332 FGGRVTEGYGMTETSCLISQLDEGDNLSG-HVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEI---CVRG---PLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYG--DSF-NSALVAIVSLDQDAFKAWAASESIQYENLEHFCNDPRARAAV 898 FG R+ YGMTET I GD +G E ++ D ++P P GEI C++G IFK Y+ + T +V++ DGW HTGD G G +DR+ N+ K GE ++ ++EN+ A + V G DS + A+ A V L++ E++ E FC A+ V Sbjct: 311 FGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-------DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRG-GENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE--------GETLSEEEFFRFCEQNMAKFKV 493
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: CAIC_ECOSE (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain SE11) GN=caiC PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 7.115e-11 Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 2 Query: 332 FGGRVTEGYGMTETSCLISQLDEGDNLSG-HVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEI---CVRG---PLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYG--DSF-NSALVAIVSLDQDAFKAWAASESIQYENLEHFCNDPRARAAV 898 FG R+ YGMTET I GD +G E ++ D ++P P GEI C++G IFK Y+ + T +V++ DGW HTGD G G +DR+ N+ K GE ++ ++EN+ A + V G DS + A+ A V L++ E++ E FC A+ V Sbjct: 311 FGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-------DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRG-GENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE--------GETLSEEEFFRFCEQNMAKFKV 493
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: CAIC_ECOHS (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O9:H4 (strain HS) GN=caiC PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 7.115e-11 Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 2 Query: 332 FGGRVTEGYGMTETSCLISQLDEGDNLSG-HVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEI---CVRG---PLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYG--DSF-NSALVAIVSLDQDAFKAWAASESIQYENLEHFCNDPRARAAV 898 FG R+ YGMTET I GD +G E ++ D ++P P GEI C++G IFK Y+ + T +V++ DGW HTGD G G +DR+ N+ K GE ++ ++EN+ A + V G DS + A+ A V L++ E++ E FC A+ V Sbjct: 311 FGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-------DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRG-GENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE--------GETLSEEEFFRFCEQNMAKFKV 493
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: CAIC_ECO24 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=caiC PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 7.115e-11 Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 2 Query: 332 FGGRVTEGYGMTETSCLISQLDEGDNLSG-HVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEI---CVRG---PLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYG--DSF-NSALVAIVSLDQDAFKAWAASESIQYENLEHFCNDPRARAAV 898 FG R+ YGMTET I GD +G E ++ D ++P P GEI C++G IFK Y+ + T +V++ DGW HTGD G G +DR+ N+ K GE ++ ++EN+ A + V G DS + A+ A V L++ E++ E FC A+ V Sbjct: 311 FGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-------DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRG-GENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE--------GETLSEEEFFRFCEQNMAKFKV 493
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: CAIC_ECOSM (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.293e-11 Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 2 Query: 332 FGGRVTEGYGMTETSCLISQLDEGDNLSG-HVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEI---CVRG---PLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYG--DSF-NSALVAIVSLDQDAFKAWAASESIQYENLEHFCNDPRARAAV 898 FG R+ YGMTET I GD +G E ++ D ++P P GEI C++G IFK Y+ + T +V++ DGW HTGD G G +DR+ N+ K GE ++ ++EN+ A + V G DS + A+ A V L++ E++ E FC A+ V Sbjct: 311 FGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-------DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRG-GENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE--------GETLSEEEFFRFCEQNMAKFKV 493 The following BLAST results are available for this feature:
BLAST of DY305457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305457 ID=DY305457; Name=DY305457; organism=Citrus sinensis; type=EST; length=1270bpback to top |