DY305457

Overview
NameDY305457
Unique NameDY305457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1270
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 5.435e-19
Identity = 57/156 (36.54%), Postives = 92/156 (58.97%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICF-GGRVTEGYGMTETSCLIS--QLDEGDNLS-GHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENV 721
            ++F+GSGA+PL  DV++ +   F    + +GYGMTET  +IS    ++G     G  G+  +  E K+VD+  + +   +Q    GEICVRGP + +GY+ + +Q  E   + GW HTGD+G +  GG+L ++DR K + K  +G  IA  ++E +
Sbjct:  316 LKFIGSGAAPLGKDVMEVVAKKFPDSEIVQGYGMTETCGIISLEYPEKGQAREFGSTGTLVSGVEAKIVDIKTLKHLPPNQV---GEICVRGPNVMQGYFNN-VQATEFTIKQGWLHTGDLGYFDGGGQLFVVDRLKELIKY-KGFQIAPAELEGL 466          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: LUCI_LUCCR (Luciferin 4-monooxygenase OS=Luciola cruciata PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.581e-18
Identity = 55/150 (36.67%), Postives = 84/150 (56.00%), Query Frame = 2
Query:  275 MGSGASPLSPDVLDFLKICFG-GRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENV 721
            + SG +PLS +V + +   F    V +GYG+TET+  I    EGD+  G  G      + K++D+          P  RGE+CV+GP++ KGY  +   TKE+IDE+GW HTGDIG +       I+DR K++ K  +G  +   ++E+V
Sbjct:  314 IASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIITPEGDDKPGASGKVVPLFKAKVIDLDTKKSLG---PNRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKY-KGYQVPPAELESV 459          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: LUCI_PHOPY (Luciferin 4-monooxygenase OS=Photinus pyralis PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.065e-18
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query:  275 MGSGASPLSPDVLDFLKICFG-GRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENV 721
            + SG +PLS +V + +   F    + +GYG+TET+  I    EGD+  G VG      E K+VD+        +Q   RGE+CVRGP+I  GY  +   T  +ID+DGW H+GDI  W       I+DR K++ K  +G  +A  ++E++
Sbjct:  312 IASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQ---RGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKY-KGYQVAPAELESI 457          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: LUCI_LUCLA (Luciferin 4-monooxygenase OS=Luciola lateralis PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.523e-18
Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = 2
Query:  275 MGSGASPLSPDVLDFLKICFG-GRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENV 721
            + SG +PLS ++ + +   F    V +GYG+TET+  I    EGD+  G  G      + K++D+          P  RGE+CV+GP++ KGY  +   T+E+IDE+GW HTGDIG +       I+DR K++ K  +G  +   ++E+V
Sbjct:  314 IASGGAPLSKEIGEAVARRFNLPGVRQGYGLTETTSAIIITPEGDDKPGASGKVVPLFKAKVIDLDTKKTLG---PNRRGEVCVKGPMLMKGYVDNPEATREIIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKY-KGYQVPPAELESV 459          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: ACBG2_RAT (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus norvegicus GN=Acsbg2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.601e-18
Identity = 103/325 (31.69%), Postives = 139/325 (42.77%), Query Frame = 2
Query:    8 FYQGDNMK--LMDDLAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAA------YNAKKQAMLSGKNPSPMWDR----LVFNKIKDKLG-GRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNA-----ACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIEN-VYAKCKFVGQCFVYGD--SFNSALVAI-VSLDQDAFKAWAASESIQYENLE--HFCNDPRARAAVLADM 910
            F Q D ++  L+  L  ++PT F  VPR++ ++   I   V  S  LR++ F  A       N KK   + GK   PM  R    LVF K++  LG        SGASPLS DV +F  +     + E YGMTE S              H  S  +     +C   L     M Y         GE+C+ G  +F GY   E  T EV+DEDGW H+GDIG       L I  R K +   A GE I    IE  V  K   +    + GD   F S L+ +    DQ       + E +   NLE   FC    ++A  ++D+
Sbjct:  295 FAQPDALRGTLVYTLQEVKPTYFLGVPRVWEKMQDTIKENVAKSSNLRKKAFAWAKMLGLKVNTKK---MLGKRDIPMNYRMAKALVFTKVRTSLGLDNCHTFFSGASPLSQDVSEFF-LSLDIPIGEIYGMTECS------------GPHTVSCKSIYRVLSCGKVLNGCKNMLYKQNKDGV--GEVCMWGRHVFMGYLGKEDATLEVLDEDGWLHSGDIGRLDSHDFLYITGRIKEVLITAGGENIWPIPIETLVKEKIPIISHAMLVGDKAKFLSMLLTLKCETDQ------MSGEPLDKLNLEAISFCQMLGSQAVTVSDI 595          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.849e-18
Identity = 61/156 (39.10%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICF-GGRVTEGYGMTETS-----CLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIE 715
            VR + SGA+PL  ++ D ++  F   ++ +GYGMTE       CL    +  +  SG  G+     E+K+VD PE N +       RGEIC+RG  I KGY  D   T+  IDE+GW HTGDIG       L I+DR K I K  +G  +A  ++E
Sbjct:  303 VRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVD-PETNASLPRNQ--RGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKY-KGFQVAPAELE 454          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.849e-18
Identity = 61/156 (39.10%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICF-GGRVTEGYGMTETS-----CLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIE 715
            VR + SGA+PL  ++ D ++  F   ++ +GYGMTE       CL    +  +  SG  G+     E+K+VD PE N +       RGEIC+RG  I KGY  D   T+  IDE+GW HTGDIG       L I+DR K I K  +G  +A  ++E
Sbjct:  303 VRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVD-PETNASLPRNQ--RGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKY-KGFQVAPAELE 454          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: ACBG2_HUMAN (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo sapiens GN=ACSBG2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.025e-17
Identity = 76/265 (28.68%), Postives = 122/265 (46.04%), Query Frame = 2
Query:    8 FYQGDNMK--LMDDLAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLF----NAAYNAKKQAMLSGKNPSPMWDR----LVFNKIKDKLG-GRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIEN-VYAKCKFVGQCFVYGD 766
            F Q D +K  L+  L  ++PTVF  VP+++ +I+  +      S GL+++ F    N  +    + ML GK  +P+  R    LVF+K+K  LG        SG +PL+ +  +F  +     + E YG++E+S   +  ++ +      G     C+         N   +      GEIC+ G  IF GY + E +T E ID++GW H+GD+G     G L +    K I   A GE +    +E  V  K   +    + GD
Sbjct:  295 FAQADALKGTLVSTLKEVKPTVFIGVPQIWEKIHEMVKKNSAKSMGLKKKAFVWARNIGFKVNSKKML-GKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFISGTAPLNQETAEFF-LSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCK---------NMLFQQNKDGIGEICLWGRHIFMGYLESETETTEAIDDEGWLHSGDLGQLDGLGFLYVTGHIKEILITAGGENVPPIPVETLVKKKIPIISNAMLVGD 548          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL1_ORYSJ (Probable 4-coumarate--CoA ligase 1 OS=Oryza sativa subsp. japonica GN=4CL1 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.895e-17
Identity = 68/214 (31.78%), Postives = 98/214 (45.79%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLD-FLKICFGGRVTEGYGMTETS-----CLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSAL----VAIVS------LDQDAFKAWAASESIQYENL 859
            VR + SGA+P+  D+ D F+    G  + +GYGMTE       CL    +     SG  G+     E+K++D         + P   GEIC+RG  I KGY  +   TK  ID +GW HTGDIG       + I+DR K I K  +G  +A  ++E +      +    V G      +    VA V+      L +D  K + A E I Y+ +
Sbjct:  322 VRMVLSGAAPMGKDIEDAFMAKLPGAVLGQGYGMTEAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELKIIDPDTGKSLGRNLP---GEICIRGQQIMKGYLNNPEATKNTIDAEGWLHTGDIGYVDDDDEIFIVDRLKEIIKY-RGFQVAPAELEALLITHPSIADAAVVGKQIEPEIGEIPVAFVAKTEGSELSEDDVKQFVAKEVIYYKKI 531          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.644e-17
Identity = 59/156 (37.82%), Postives = 81/156 (51.92%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICF-GGRVTEGYGMTETS-----CLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIE 715
            VR + SGA+PL  ++ D ++  F   ++ +GYGMTE       CL    +  D  SG  G+     E+K+VD         +QP   GEIC+RG  I KGY  D   T   ID++GW HTGDIG       L I+DR K + K  +G  +A  +IE
Sbjct:  307 VRTVMSGAAPLGKELEDAVRTKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQP---GEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKY-KGFQVAPAEIE 458          
The following BLAST results are available for this feature:
BLAST of DY305457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
4CLL1_ORYSJ5.435e-1936.544-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
LUCI_LUCCR1.581e-1836.67Luciferin 4-monooxygenase OS=Luciola cruciata PE=1... [more]
LUCI_PHOPY2.065e-1836.67Luciferin 4-monooxygenase OS=Photinus pyralis PE=1... [more]
LUCI_LUCLA3.523e-1835.33Luciferin 4-monooxygenase OS=Luciola lateralis PE=... [more]
ACBG2_RAT4.601e-1831.69Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus... [more]
4CL2_PETCR7.849e-1839.104-coumarate--CoA ligase 1 OS=Petroselinum crispum ... [more]
4CL1_PETCR7.849e-1839.104-coumarate--CoA ligase 1 OS=Petroselinum crispum ... [more]
ACBG2_HUMAN1.025e-1728.68Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo s... [more]
4CL1_ORYSJ3.895e-1731.78Probable 4-coumarate--CoA ligase 1 OS=Oryza sativa... [more]
4CL1_TOBAC6.644e-1737.824-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305457 ID=DY305457; Name=DY305457; organism=Citrus sinensis; type=EST; length=1270bp
GGTTGGATTTTACCAGGGGGATAATATGAAACTGATGGATGATCTGGCAG
CTCTAAGACCTACTGTATTCTGCAGTGTTCCTCGGCTGTACAATAGAATA
TATGCTGGCATCACAAGTGCCGTAAGAACATCTGGTGGACTAAGGGAGAG
ACTGTTCAATGCTGCCTACAATGCTAAGAAGCAAGCGATGTTGAGCGGTA
AGAATCCGTCTCCCATGTGGGACAGATTGGTATTCAACAAGATAAAGGAC
AAACTTGGAGGACGAGTACGTTTTATGGGTTCTGGTGCTTCTCCCTTGTC
TCCTGATGTCTTGGATTTCTTAAAAATCTGCTTTGGTGGGCGTGTAACTG
AAGGATATGGAATGACTGAGACTTCATGTCTTATAAGTCAGCTGGATGAG
GGTGACAACCTTTCTGGTCATGTTGGCTCTCCAAATGCAGCATGTGAGAT
AAAGCTTGTGGATGTCCCAGAAATGAACTACACATCTGAGGATCAACCAT
GTCCTCGCGGAGAAATCTGTGTTAGAGGTCCCCTAATTTTCAAGGGCTAT
TATAAAGATGAAATCCAGACAAAAGAAGTTATTGATGAAGATGGATGGTT
TCATACTGGAGATATAGGAATGTGGATACCCGGTGGTCGTCTAAAGATTA
TTGATAGGAAGAAGAATATTTTTAAGTTAGCGCAGGGAGAGTACATAGCT
GCAGAGAAAATTGAGAATGTATATGCCAAGTGCAAGTTTGTTGGTCAGTG
CTTTGTCTATGGTGACAGCTTCAATTCGGCTTTGGTAGCCATTGTCTCAT
TGGACCAAGATGCTTTTAAAGCCTGGGCTGCATCTGAAAGCATTCAATAT
GAAAACTTAGAGCACTTTTGCAATGACCCAAGGGCGAGGGCTGCTGTGTT
GGCTGATATGGATTCTCCTAGAAAAAAAACCTCATTTGAAAGGCTTTGAT
TTTTTAAAACGGTGACTTTGGTGCCTCAACCCTTCCCAGTGGAAAAGGGA
CTGCTCCCTCCCACATTTAAAAAAAAAAAACCACAACCAAAACAATCTTT
TTCAAAAACCCATTTCGAAATATTATGGTTAACTTTTTTAAATTTTTATT
CCCTCCCCAAAACATTTGTGGAAAAACATCCAAAATCCCCAAAGGGTGTA
AAAATTAAAAAGGGTTTTTTTAAAAAATTTTTTTTTTTTACAAAATATTC
CCCCCCCAAAAAAAAAACAAAAACCGCGGGGGGGTGGGGGGGGCACTTCT
TTTCTTTTTTTTTTTTGTTT
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