DY305457

Overview
NameDY305457
Unique NameDY305457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1270
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: ACBG1_HUMAN (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Homo sapiens GN=ACSBG1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.678e-17
Identity = 93/332 (28.01%), Postives = 145/332 (43.67%), Query Frame = 2
Query:    2 VGFYQGDNMK--LMDDLAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLS--GKNPSP----MWDRLVFNKIKDKLG-GRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIEN-VYAKCKFVGQCFVYGD--SFNSALVAI-VSLDQDAFKAWAASESIQYENLE----HFCNDPRARAAVLADMDSPRKKTSFERL 946
            V F + D +K  L++ L  + PT    VPR++ +I   I      SG +R ++   A +   +  L+  G +  P    + D LV  K++  LG  + +    GA+P+  +   F  +    R+  GYG++ETS         +      G     C +KLV     N  +E      GEIC+ G  IF GY   E +T E IDE+GW HTGD G     G L I  R K +   A GE +    IE  V  +   +    + GD   F S L+ +  +LD D         S Q +NL      FC    +RA  ++++   + +  ++ +
Sbjct:  348 VCFAEPDALKGSLVNTLREVEPTSHMGVPRVWEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDLKPFTTRLADYLVLAKVRQALGFAKCQKNFYGAAPMMAETQHFF-LGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSGKLVPGCRVKLV-----NQDAEGI----GEICLWGRTIFMGYLNMEDKTCEAIDEEGWLHTGDAGRLDADGFLYITGRLKELIITAGGENVPPVPIEEAVKMELPIISNAMLIGDQRKFLSMLLTLKCTLDPDT--------SDQTDNLTEQAVEFCQRVGSRATTVSEIIEKKDEAVYQAI 661          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL1_ARATH (4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.133e-16
Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICF-GGRVTEGYGMTETSCLISQL-----DEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIE 715
            +R + SGA+PL  ++ D +   F   ++ +GYGMTE   +++       +     SG  G+     E+K+VD    +  S +QP   GEIC+RG  I KGY  +   T E ID+DGW HTGDIG+      L I+DR K + K  +G  +A  ++E
Sbjct:  323 IRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQP---GEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKY-KGFQVAPAELE 474          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL3_ORYSJ (Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica GN=4CL3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.480e-16
Identity = 66/213 (30.99%), Postives = 97/213 (45.54%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLD-FLKICFGGRVTEGYGMTETS-----CLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENV---YAKCKFVGQCFVYGDSFNSALVAIV------SLDQDAFKAWAASESIQYENL 859
            +R + SGA+P+  D+ D F+       + +GYGMTE       CL    +     SG  G+     E+K+VD         +Q    GEIC+RG  I KGY  D   TK  IDEDGW HTGDIG       + I+DR K I K  +G  +   ++E +   + + K      +  D      VA +       + +D  K + A E + Y+ +
Sbjct:  301 IRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAELKIVDPDTGTSLGRNQS---GEICIRGEQIMKGYLNDPEATKNTIDEDGWLHTGDIGFVDDDDEIFIVDRLKEIIKY-KGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEVPVAFIVRTEGSEITEDEIKKFVAKEVVFYKRI 509          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: ACBG2_MOUSE (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Mus musculus GN=Acsbg2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.933e-16
Identity = 91/324 (28.09%), Postives = 137/324 (42.28%), Query Frame = 2
Query:    8 FYQGDNMK--LMDDLAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAA------YNAKKQAMLSGKNPSPMWDR----LVFNKIKDKLG-GRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIEN-VYAKCKFVGQCFVYGDSFNSALVAIVSLDQDAFKAWAASESIQYENLEHFCNDPRARAAVLADMDSPRKKTSF 937
            F Q D ++  L+  L  ++PT+F  VPR++ ++   I   V  S  LR++ F  A       N K+   + GK   PM  R    LVF K++  LG        S ASPLS DV +F  +     + E YGM+E S           +S        +C   L     M Y    +    GE+C+ G  +F GY   E  T E +DE+GW H+GDIG       L I  R K I   A GE ++   IE  V  K   +    + GD      + +    +   K+      +  E  + FC    ++A  ++D+   R +  +
Sbjct:  295 FAQPDALRGTLVYTLQEVKPTLFMGVPRIWEKMQDTIKENVARSSRLRKKAFAWAKMLGLKVNTKR---MLGKRDIPMNYRMAKALVFAKVRTSLGLDNCHAFFSSASPLSQDVSEFF-LSLDIPIGEIYGMSECS-------GPHTVSNKSVYRVLSCGKVLSGCKNMLYNQNKEGV--GEVCMWGRHVFMGYLNKEEATLEALDENGWLHSGDIGRLDSHDFLYITGRIKEILITAGGENVSPIPIETLVKEKIPIISHAMLVGDKAKFLCMLLTLKCETDRKSGEPLNKLSVE-AKSFCQMLGSQATTVSDILKSRDQVVY 604          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.933e-16
Identity = 57/156 (36.54%), Postives = 81/156 (51.92%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICF-GGRVTEGYGMTETS-----CLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIE 715
            VR + SGA+PL  ++ D ++  F   ++ +GYGMTE       CL    +  D  SG  G+     E+K+VD    +    + P   GEIC+RG  I KGY  D   T   ID++GW HTGDIG       L I+DR K + K  +G  +A  ++E
Sbjct:  311 VRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPETGSSLPRNHP---GEICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKY-KGFQVAPAELE 462          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: LUCI_LUCMI (Luciferin 4-monooxygenase OS=Luciola mingrelica PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.525e-16
Identity = 51/150 (34.00%), Postives = 82/150 (54.67%), Query Frame = 2
Query:  275 MGSGASPLSPDVLDFLKICFG-GRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENV 721
            + SG +PL+ +V + +   F    V +GYG+TET+       EGD+  G  G      ++K++D+        ++   RGEICV+GP +  GY  +   T+E IDE+GW HTGDIG +       I+DR K++ K  +G  +   ++E+V
Sbjct:  314 IASGGAPLAKEVGEAVARRFNLPGVRQGYGLTETTSAFIITPEGDDKPGASGKVVPLFKVKVIDLDTKKTLGVNR---RGEICVKGPSLMLGYSNNPEATRETIDEEGWLHTGDIGYYDEDEHFFIVDRLKSLIKY-KGYQVPPAELESV 459          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.525e-16
Identity = 58/161 (36.02%), Postives = 87/161 (54.04%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICFGGR------VTEGYGMTETSCLISQLDE--GDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPC-PRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENV 721
            ++++GSGA+PL  D+++       GR      + +GYGMTET  ++S  D   G   SG  G      E ++V V     T + QP   +GEI VRGP + KGY  +   TKE ID+  W HTGD+G +   G L ++DR K + K  +G  +A  ++E +
Sbjct:  309 LKYIGSGAAPLGKDLMEEC-----GRNIPNVLLMQGYGMTETCGIVSVEDPRLGKRNSGSAGMLAPGVEAQIVSVE----TGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKY-KGFQVAPAELEGL 459          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 3.298e-16
Identity = 57/168 (33.93%), Postives = 85/168 (50.60%), Query Frame = 2
Query:  281 SGASPLSPDVLDFLKICFGG-RVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAA------CEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYG 763
            + A+PL+PD+L   +  F G +V E YG+TE SC+      GD   GHV   ++        E+K VD         + P   GE+CVR   + +GYYK + +T+  +D  GW HTGD+G     G + I+DR K + K  +G  +A  ++E V      V    V+G
Sbjct:  318 TAAAPLAPDLLAAFQRKFPGVQVEEAYGLTEHSCITLTHAAGDG-HGHVAKKSSVGFILPNLEVKFVDPDTGRSLPANTP---GELCVRSQSVMQGYYKRKEETERTVDGKGWLHTGDVGYIDGDGDVFIVDRIKELIKY-KGFQVAPAELEAVLLSHPSVEDAAVFG 480          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.298e-16
Identity = 57/156 (36.54%), Postives = 81/156 (51.92%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICF-GGRVTEGYGMTETS-----CLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIE 715
            VR + SGA+PL  ++ D ++  F   ++ +GYGMTE       CL    +  D  SG  G+     E+K+VD         +QP   GEIC+RG  I KGY  D   T   I+++GW HTGDIG       L I+DR K + K  +G  +A  ++E
Sbjct:  305 VRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQP---GEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKY-KGFQVAPAELE 456          
BLAST of DY305457 vs. ExPASy Swiss-Prot
Match: 4CL2_DICDI (Probable 4-coumarate--CoA ligase 2 OS=Dictyostelium discoideum GN=4cl2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.298e-16
Identity = 61/168 (36.31%), Postives = 84/168 (50.00%), Query Frame = 2
Query:  266 VRFMGSGASPLSPDVLDFLKICFGGR--VTEGYGMTETSCLISQLDEGDNLSGHVGS--PNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFV 757
            +R + SGA+PLS +V D +K  F G+  + +GYG TE S     +  G   SG  G   PN   +I   +  E     E     +GEIC++GP +  GYY +E  T EVID+DG+F TGDIG     G   I+DR K + K    +   AE    + +  K    C V
Sbjct:  316 LRTLFSGAAPLSREVEDLIKERFKGKLIIKQGYGATELSPACFVIPSGLIKSGSAGILLPNQLVKIISPETGENLGMGE-----KGEICIKGPNVMLGYYNNEKATNEVIDKDGFFKTGDIGYVDEDGYYFIVDRSKELIKCKGFQVPPAELEALLLSHPKVADACVV 478          
The following BLAST results are available for this feature:
BLAST of DY305457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
ACBG1_HUMAN8.678e-1728.01Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Homo s... [more]
4CL1_ARATH1.133e-1635.904-coumarate--CoA ligase 1 OS=Arabidopsis thaliana ... [more]
4CL3_ORYSJ1.480e-1630.99Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa... [more]
ACBG2_MOUSE1.933e-1628.09Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Mus mu... [more]
4CL_VANPL1.933e-1636.544-coumarate--CoA ligase OS=Vanilla planifolia GN=4... [more]
LUCI_LUCMI2.525e-1634.00Luciferin 4-monooxygenase OS=Luciola mingrelica PE... [more]
4CLL7_ARATH2.525e-1636.024-coumarate--CoA ligase-like 7 OS=Arabidopsis thal... [more]
4CLL9_ORYSJ3.298e-1633.934-coumarate--CoA ligase-like 9 OS=Oryza sativa sub... [more]
4CL2_SOLTU3.298e-1636.544-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=... [more]
4CL2_DICDI3.298e-1636.31Probable 4-coumarate--CoA ligase 2 OS=Dictyosteliu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305457 ID=DY305457; Name=DY305457; organism=Citrus sinensis; type=EST; length=1270bp
GGTTGGATTTTACCAGGGGGATAATATGAAACTGATGGATGATCTGGCAG
CTCTAAGACCTACTGTATTCTGCAGTGTTCCTCGGCTGTACAATAGAATA
TATGCTGGCATCACAAGTGCCGTAAGAACATCTGGTGGACTAAGGGAGAG
ACTGTTCAATGCTGCCTACAATGCTAAGAAGCAAGCGATGTTGAGCGGTA
AGAATCCGTCTCCCATGTGGGACAGATTGGTATTCAACAAGATAAAGGAC
AAACTTGGAGGACGAGTACGTTTTATGGGTTCTGGTGCTTCTCCCTTGTC
TCCTGATGTCTTGGATTTCTTAAAAATCTGCTTTGGTGGGCGTGTAACTG
AAGGATATGGAATGACTGAGACTTCATGTCTTATAAGTCAGCTGGATGAG
GGTGACAACCTTTCTGGTCATGTTGGCTCTCCAAATGCAGCATGTGAGAT
AAAGCTTGTGGATGTCCCAGAAATGAACTACACATCTGAGGATCAACCAT
GTCCTCGCGGAGAAATCTGTGTTAGAGGTCCCCTAATTTTCAAGGGCTAT
TATAAAGATGAAATCCAGACAAAAGAAGTTATTGATGAAGATGGATGGTT
TCATACTGGAGATATAGGAATGTGGATACCCGGTGGTCGTCTAAAGATTA
TTGATAGGAAGAAGAATATTTTTAAGTTAGCGCAGGGAGAGTACATAGCT
GCAGAGAAAATTGAGAATGTATATGCCAAGTGCAAGTTTGTTGGTCAGTG
CTTTGTCTATGGTGACAGCTTCAATTCGGCTTTGGTAGCCATTGTCTCAT
TGGACCAAGATGCTTTTAAAGCCTGGGCTGCATCTGAAAGCATTCAATAT
GAAAACTTAGAGCACTTTTGCAATGACCCAAGGGCGAGGGCTGCTGTGTT
GGCTGATATGGATTCTCCTAGAAAAAAAACCTCATTTGAAAGGCTTTGAT
TTTTTAAAACGGTGACTTTGGTGCCTCAACCCTTCCCAGTGGAAAAGGGA
CTGCTCCCTCCCACATTTAAAAAAAAAAAACCACAACCAAAACAATCTTT
TTCAAAAACCCATTTCGAAATATTATGGTTAACTTTTTTAAATTTTTATT
CCCTCCCCAAAACATTTGTGGAAAAACATCCAAAATCCCCAAAGGGTGTA
AAAATTAAAAAGGGTTTTTTTAAAAAATTTTTTTTTTTTACAAAATATTC
CCCCCCCAAAAAAAAAACAAAAACCGCGGGGGGGTGGGGGGGGCACTTCT
TTTCTTTTTTTTTTTTGTTT
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