DY305456

Overview
NameDY305456
Unique NameDY305456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1156
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 7.505e-24
Identity = 77/268 (28.73%), Postives = 122/268 (45.52%), Query Frame = 1
Query:   70 IPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNAS-VEKVFFWRDFLKVFVHPEFHSPNKPVGFSE-----------ISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            IP  + +        + +E+D    +PV+D  +L     +   +    +  AC   GFF V  H V   L    +D    FF L   EKR    + V   +   TS +A        W++ L    H    +P     FS            +  +YC+ +++++  +++ +  SLG+E  Y  R    DS   I+  N YPPCP+PE  +G  PH D   LT+L Q+ + GL++L +G+W  V+ VP + ++N GD    LSNG  K
Sbjct:   42 IPEPFVWPNGDARPASAAELD----MPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRR--ARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYY-REFFADSS-SIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYK 301          

HSP 2 Score: 23.483 bits (49), Expect = 7.505e-24
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  828 QYKSVVHKTVVNTKRQ 875
            +YKS +H+ VVN +R+
Sbjct:  299 RYKSCLHRAVVNQRRE 314          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.102e-23
Identity = 74/238 (31.09%), Postives = 123/238 (51.68%), Query Frame = 1
Query:  136 EDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEK-REFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQI--LVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            E   PVI+ + L   S   R  V+  +  AC +WGFF ++NH +  +LM+      +  +    E++ +E      LD +    + +   E  FF R  L V    E    ++   + ++  E+   + ++A E+L  + E+LGLE  Y+++      G      V+N YPPCP+PEL  G+  H+D G L LL Q+  + GL +L +GKWV+V  + +S ++N GD +E ++NG  K
Sbjct:    2 EMDFPVINMNNLNGES---RVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEMVASKGLDSVETEIN-DTDWESTFFLRH-LPVSNMSEIGDLDEE--YKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSN-YPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYK 231          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.880e-23
Identity = 76/238 (31.93%), Postives = 124/238 (52.10%), Query Frame = 1
Query:  139 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEK-REFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAM-NLDSGLQILVANL--YPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            DS PVI+   L         K+I D   AC +WGFF ++NH++P +LM+      +  +    E++ +E     V   +      +   E  FF R  L V    E   P+      ++  E+ +++ ++A ++L  + E+LGLE  Y++ A     +GL      +  YPPCP+PEL  G+  H+D G L LL Q+  + GLQLL +G+WV+V  + +S ++N GD +E ++NG  K
Sbjct:    2 DSFPVINMEKLEGQERAATMKLIND---ACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELMASKVEGAVVDANDMDW--ESTFFIRH-LPVSNLSEI--PDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYK 231          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.880e-23
Identity = 73/246 (29.67%), Postives = 128/246 (52.03%), Query Frame = 1
Query:  148 PVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEK-REFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSG--LQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTKVLCIKLS*TQKD 873
            PV+D S L     DQ   +I D   AC +WGFF ++NH +P  LM+      +  + ++ E+K  +      L+ +      +   E  F+ R   +  +   +  P+    +     ++ KR+  +A +LL  + E+LGLE  Y+++  +   G      V+N YP CP+PE+  G+  H+D G + LL Q+  + GLQLL +G W++V  + +S ++N GD +E ++NG  K +  ++  TQK+
Sbjct:    8 PVVDLSKLIGEERDQTMALIND---ACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLEREVE-DVDWESTFYLRHLPQSNL---YDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSN-YPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVV-TQKE 244          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.144e-23
Identity = 77/237 (32.49%), Postives = 116/237 (48.95%), Query Frame = 1
Query:  142 SIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEK-REFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDS-GLQILVANL--YPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            S PVI+  LL  S   QR   +  L  AC +WG + ++NH +  +LM       +  +    E++ +EFA K  LD +      N   E  FF R      +      P+          E+   +  +A  LL  + E LGLE  Y+++     S GL      +  YPPCP+PEL  G+  H+D G + LL Q+  + GLQLL +G+W++V  V +S +VN GD +E ++NG  K
Sbjct:    5 SFPVINMELLQGS---QRPAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEFASK-TLDTVENVEPENLDWESTFFLRHLPTSNIS---QIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYK 234          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.219e-22
Identity = 70/237 (29.54%), Postives = 125/237 (52.74%), Query Frame = 1
Query:  139 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEK-REFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQI--LVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            ++ P++D   L +       ++I+D   AC +WGFF  +NH +  ++M+      +  +    E++ +E      L+ ++     +   E  FF R  L V    E   P+    + ++  E+  ++ ++A ELL  + E+LGLE  Y+++A     G      V+N YPPCP+PEL  G+  H+D G + LL Q+  + GLQLL + +W++V  + +S ++N GD +E ++NG  K
Sbjct:    2 ENFPIVDMGKLNTEDRKSTMELIKD---ACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLECVQSEID-DLDWESTFFLRH-LPVSSISEI--PDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSN-YPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYK 230          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.361e-22
Identity = 74/272 (27.21%), Postives = 124/272 (45.59%), Query Frame = 1
Query:   58 GLTSIPSTYNFTQNQHDHEAVSEIDPEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGF------------SEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            G   IPS + + + +      +E   E  +P+ID   + S  P   ++V + +G+AC   GFF V+NH +  +L+         FF +   EK+  A +H  +     +SF         W++ L     P    P   V +             E+   YC  + +++ E+++ + ESLG+   +  R    +  +  L  N YPPC +P   +G  PH D   LT+L Q+ + GLQ+   G+W ++    ++F+VN GD    LSNG  K
Sbjct:   13 GRADIPSQFIWPEGESPTPDAAE---ELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQR-ALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPS--DPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRL--NYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYK 276          

HSP 2 Score: 21.557 bits (44), Expect = 1.361e-22
Identity = 7/14 (50.00%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  828 QYKSVVHKTVVNTK 869
            +YKS +H+ VVN++
Sbjct:  274 RYKSCLHRAVVNSR 287          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.592e-22
Identity = 67/237 (28.27%), Postives = 125/237 (52.74%), Query Frame = 1
Query:  139 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEK-REFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQI--LVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            +S PVI+   +     ++R+  +  +  AC +WGFF ++NH +P +LM+      +  +    E++ +E      L+ I+   + +   E  +F R   +  +      P+    +  +  ++ +R+ ++A  LL  + E+LGLE  Y+++A     G      VAN YPPCP+ +L  G+  H+D G + LL Q+  + GLQLL + +W++V  + +S ++N GD +E ++NG  K
Sbjct:    2 ESFPVINMEKMNG---EERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEGIQAEVT-DMDWESTYFLRHLPQSNIS---EVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVAN-YPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYK 230          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.592e-22
Identity = 77/237 (32.49%), Postives = 116/237 (48.95%), Query Frame = 1
Query:  142 SIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEK-REFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDS-GLQILVANL--YPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            S PVI+  LL  S   QR   +  L  AC +WGFF ++NH +  +LM       +  +    E++ +EFA K  LD +      N   E  FF R      +      P+          E+ + + ++A  LL  + E LGLE  Y++R     S GL      +  YPPCP+P+L  G+  H+D G + LL Q+  + GLQLL + +W+ V  +  S +VN GD +E ++NG  K
Sbjct:    5 SFPVINMELLQGS---QRPAAMALLRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEFASK-TLDSVENVDPDNLDWESTFFLRHLPTSNIS---QIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYK 234          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.546e-22
Identity = 65/234 (27.78%), Postives = 123/234 (52.56%), Query Frame = 1
Query:  139 DSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEK-REFAGKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEFHSPNKPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSG--LQILVANLYPPCPQPELAMGMPPHSDHGLLTLLTQNG-ICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNG 828
            ++ P+I+   L       R   ++ +  AC +WGFF +++H +P + ++      +  +    E++ +E      L+ ++   + +   E  F+ R   K  +      P+    +  +  E+  ++ ++A +LL  + E+LGLE  Y+++A    +G      V+N YPPCP PEL  G+  H+D G L LL Q+  + GLQLL +G+W++V  + +S ++N GD +E ++NG
Sbjct:    2 ENFPIINLEGLNGEG---RKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVN-DMDWESTFYLRHLPKSNIS---EVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSN-YPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNG 227          
The following BLAST results are available for this feature:
BLAST of DY305456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GAOX2_ORYSI7.505e-2428.73Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
ACCO3_CUCME1.102e-2331.091-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_PERAE1.880e-2331.931-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO1_BRAJU1.880e-2329.671-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_DORSP7.144e-2332.491-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO_PEA1.219e-2229.541-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
GAO1D_WHEAT1.361e-2227.21Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
ACCO_DIOKA1.592e-2228.271-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO2_DORSP1.592e-2232.491-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO_PRUMU3.546e-2227.781-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305456 ID=DY305456; Name=DY305456; organism=Citrus sinensis; type=EST; length=1156bp
GGCTATCTGTCAACGGCAGCAAAAATGGCTTGCGTCAAAGCGCTGGCCGA
ATCTCCTGGCCTCACCTCCATTCCTTCCACATACAACTTCACCCAAAATC
AACACGATCATGAAGCTGTTTCAGAAATCGACCCAGAAGATTCGATCCCG
GTTATTGATTTCTCTTTACTAACCTCTTCCAGCCCCGATCAGCGGTCCAA
AGTCATCCAGGATCTCGGTAAAGCCTGCAGGGACTGGGGCTTCTTCACGG
TAATAAATCATAATGTGCCTGAGAAGTTAATGGAGATGACGATGGATGCA
TGTCAAAGATTTTTCAACCTTACGGAGGAGGAGAAGAGAGAGTTTGCGGG
GAAGCATGTTTTGGACCCAATAAGATGTGGTACTAGCTTTAATGCTTCAG
TTGAGAAGGTTTTCTTTTGGAGGGATTTTCTCAAAGTCTTTGTTCATCCT
GAGTTCCATTCACCAAACAAGCCAGTTGGATTCAGTGAGATTTCACTAGA
ATATTGCAAAAGAATTAGACAAGTTGCAAGGGAGTTGCTTAAAGGGATAT
CAGAGAGTTTGGGATTGGAATTCTGCTACATCGAGAGGGCCATGAATCTA
GATTCAGGTTTGCAAATCCTGGTTGCAAATTTGTACCCGCCGTGTCCACA
GCCTGAGCTTGCAATGGGAATGCCCCCTCATTCTGATCATGGCCTATTGA
CTCTCCTCACACAAAATGGGATTTGTGGTCTTCAGTTGCTACACAATGGA
AAGTGGGTCAATGTCAATGTTGTCCCTAACTCATTTCTTGTTAACACTGG
TGATCACATTGAGAATCTGAGTAATGGCAGTACAAAAGTGTTGTGCATAA
AACTGTCGTGAACACAAAAAGACAAGGTATCGTTAACATTGCAAACGGAC
ATCTCTGGATACGTCGTTAAACCATCCAAAAATTAAAAAACCTCAAATGA
AACTCCGGCAAATTTGGAATAAATACAAGGACTTTTGGGAAATTCGCAAA
CAAACCACTTGATAAAAAACCTTTTTGGAACGGTGGAAGGTTTTAAATTA
AGCCTAAACTTAAATGGAATTTGGAAAAACATTAAACCTTTTATTTATAT
TTTAATTTTAAATAAAATTTTAATTTTAAATGGTATTTTTTAATTTTTTA
AATTTT
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