DY305456

Overview
NameDY305456
Unique NameDY305456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1156
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.595e-14
Identity = 71/270 (26.30%), Postives = 116/270 (42.96%), Query Frame = 1
Query:   70 IPSTYNFTQNQHDHEAVSEIDP---EDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRD---FLKVFVHPEFHSPNKPVG-----FSEISLEYCKRIRQVARELLKGISESLGL---EFCYIERAMNLDSGLQILV-ANLYPPCPQPELAMGMPPHSDHGLLTLLTQNGICGLQLLHNG--KWVNVNVVPNSFLVNTGDHIENLSNG 828
            +P T+ +    HDH  V         D++PV+D          +     + +  A +DWG F +  H VP +L+     A    F L   EK   A +   D    G+   +S      W +   F    +  +        G     F  +  E+ + +R +A +LL+    +LGL   +   +E    +   +   +  N YP CP P+ A+G+  H+D G  T + Q+ + GLQL  +G  +WV V  VP + +VN GD  + L+NG
Sbjct:   22 VPETHAWP-GLHDHPVVDGSGAGGGPDAVPVVDM---------RDPCAAEAVALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMR-AVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNG 280          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: IPNS_PENCH (Isopenicillin N synthetase OS=Penicillium chrysogenum GN=pcbC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.304e-13
Identity = 66/260 (25.38%), Postives = 116/260 (44.62%), Query Frame = 1
Query:  133 PEDSIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFA----GKHVLDPIRCGTSFNASVEKVFFWRDFLKVFVHPEF---------HSPN------KPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYP---PCPQPEL-------AMGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSN 825
            P+ ++P ID S L   + +++ KV + +  A RD GFF  +NH V  K   ++    +  F++T+EEK + A     K   D IR G   +   +K      +L     P+          H  N      K  GF E + +Y   +  ++  LL+G + +LG E  +  R    +  L  +V   YP   P P   +        +    H D  L+T+L Q+ +  LQ+     ++++    N++LVN G ++ +++N
Sbjct:    5 PKANVPKIDVSPLFGDNMEEKMKVARAIDAASRDTGFFYAVNHGVDVK--RLSNKTREFHFSITDEEKWDLAIRAYNKEHQDQIRAGYYLSIPEKKAVESFCYLNPNFKPDHPLIQSKTPTHEVNVWPDEKKHPGFREFAEQYYWDVFGLSSALLRGYALALGKEEDFFSRHFKKEDALSSVVLIRYPYLNPIPPAAIKTAEDGTKLSFEWHEDVSLITVLYQSDVANLQVEMPQGYLDIEADDNAYLVNCGSYMAHITN 262          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.646e-13
Identity = 71/242 (29.34%), Postives = 112/242 (46.28%), Query Frame = 1
Query:  145 IPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFAGKHVLDPIRCGTSFNASVEKVFFWRDF--LKVFVHPEFHSP-----NKPVGFSEISLEYCKRIRQVARELLKGISESLGLE-FCYIERAMNLDSGLQILVANLYPPCPQPEL--AMGMPPHSDHGLLTLLTQNGICGLQL-LHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTK 837
            IPVID   LT S  D +++++    KAC ++GFF VINH V   L+         FF L     ++ AG    DP   GT           W ++  L   +  E H       + P  F E   EY K +++++ + L+ + E L +E    + R + +      L  N YP   +  +   +G   H+D  L++LL  N   GLQ+ + +G WV+V    +SF V  GD ++ ++NG  K
Sbjct:   27 IPVID---LTDS--DAKTQIV----KACEEFGFFKVINHGVRPDLLTQLEQEAINFFAL-HHSLKDKAGPP--DPFGYGTK-RIGPNGDLGWLEYILLNANLCLESHKTTAIFRHTPAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFK 255          

HSP 2 Score: 24.6386 bits (52), Expect = 6.646e-13
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  828 QYKSVVHKTVVNTKRQGI 881
            ++KSV H+ V NTKR  I
Sbjct:  253 RFKSVKHRVVTNTKRSRI 270          
BLAST of DY305456 vs. ExPASy Swiss-Prot
Match: IPNS_EMENI (Isopenicillin N synthetase OS=Emericella nidulans GN=ipnA PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.156e-11
Identity = 66/277 (23.83%), Postives = 114/277 (41.16%), Query Frame = 1
Query:  142 SIPVIDFSLLTSSSPDQRSKVIQDLGKACRDWGFFTVINHNVPEKLMEMTMDACQRFFNLTEEEKREFA----GKHVLDPIRCGTSFNASVEKVF---------FWRDFLKVFVHPEFHSPN------KPVGFSEISLEYCKRIRQVARELLKGISESLGLEFCYIERAMNLDSGLQILVANLYPPC-PQPELA---------MGMPPHSDHGLLTLLTQNGICGLQLLHNGKWVNVNVVPNSFLVNTGDHIENLSNGSTKVLCIKLS*TQKDKVSL 885
            ++P ID S L       + +V Q +  A RD GFF  +NH +   +  ++    +   ++T EEK + A     K   D +R G   +   +K           F  D  ++      H  N      K  GF + + +Y   +  ++  LLKG + +LG E  +  R    D  L  +V   YP   P PE A         +    H D  L+T+L Q+ +  LQ+     + ++      +L+N G ++ +L+N   K    ++     ++ SL
Sbjct:    8 NVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI--NVQRLSQKTKEFHMSITPEEKWDLAIRAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAAGYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSL 282          
The following BLAST results are available for this feature:
BLAST of DY305456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
G3O22_WHEAT1.595e-1426.30Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
IPNS_PENCH2.304e-1325.38Isopenicillin N synthetase OS=Penicillium chrysoge... [more]
G2OX3_ARATH6.646e-1329.34Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]
IPNS_EMENI2.156e-1123.83Isopenicillin N synthetase OS=Emericella nidulans ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AC01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305456 ID=DY305456; Name=DY305456; organism=Citrus sinensis; type=EST; length=1156bp
GGCTATCTGTCAACGGCAGCAAAAATGGCTTGCGTCAAAGCGCTGGCCGA
ATCTCCTGGCCTCACCTCCATTCCTTCCACATACAACTTCACCCAAAATC
AACACGATCATGAAGCTGTTTCAGAAATCGACCCAGAAGATTCGATCCCG
GTTATTGATTTCTCTTTACTAACCTCTTCCAGCCCCGATCAGCGGTCCAA
AGTCATCCAGGATCTCGGTAAAGCCTGCAGGGACTGGGGCTTCTTCACGG
TAATAAATCATAATGTGCCTGAGAAGTTAATGGAGATGACGATGGATGCA
TGTCAAAGATTTTTCAACCTTACGGAGGAGGAGAAGAGAGAGTTTGCGGG
GAAGCATGTTTTGGACCCAATAAGATGTGGTACTAGCTTTAATGCTTCAG
TTGAGAAGGTTTTCTTTTGGAGGGATTTTCTCAAAGTCTTTGTTCATCCT
GAGTTCCATTCACCAAACAAGCCAGTTGGATTCAGTGAGATTTCACTAGA
ATATTGCAAAAGAATTAGACAAGTTGCAAGGGAGTTGCTTAAAGGGATAT
CAGAGAGTTTGGGATTGGAATTCTGCTACATCGAGAGGGCCATGAATCTA
GATTCAGGTTTGCAAATCCTGGTTGCAAATTTGTACCCGCCGTGTCCACA
GCCTGAGCTTGCAATGGGAATGCCCCCTCATTCTGATCATGGCCTATTGA
CTCTCCTCACACAAAATGGGATTTGTGGTCTTCAGTTGCTACACAATGGA
AAGTGGGTCAATGTCAATGTTGTCCCTAACTCATTTCTTGTTAACACTGG
TGATCACATTGAGAATCTGAGTAATGGCAGTACAAAAGTGTTGTGCATAA
AACTGTCGTGAACACAAAAAGACAAGGTATCGTTAACATTGCAAACGGAC
ATCTCTGGATACGTCGTTAAACCATCCAAAAATTAAAAAACCTCAAATGA
AACTCCGGCAAATTTGGAATAAATACAAGGACTTTTGGGAAATTCGCAAA
CAAACCACTTGATAAAAAACCTTTTTGGAACGGTGGAAGGTTTTAAATTA
AGCCTAAACTTAAATGGAATTTGGAAAAACATTAAACCTTTTATTTATAT
TTTAATTTTAAATAAAATTTTAATTTTAAATGGTATTTTTTAATTTTTTA
AATTTT
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