DY305455

Overview
NameDY305455
Unique NameDY305455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1279
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305455 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.810e-12
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 2
Query:  620 SDASDQDYCKDVVSKKRKTMPQWTEQVKVTSGTALEGTLDDGYCWRKYGQKDILGRNFPRGYYRCTHRHARGCLATKQVQRSHHDPFMFEVTY 898
            S+ S  D+ +   SK +K+     +Q +V      E  L D + WRKYGQK I G  +PR YYRC+   ++GCLA KQV+R+  +P  F +TY
Sbjct:   97 SNGSRADHIRISESKSKKSKKN--QQKRVVEQVKEENLLSDAWAWRKYGQKPIKGSPYPRSYYRCS--SSKGCLARKQVERNPQNPEKFTITY 185          
BLAST of DY305455 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.488e-12
Identity = 45/116 (38.79%), Postives = 60/116 (51.72%), Query Frame = 2
Query:  581 SPRSFPNTATSP-------RSDASDQDYCKDVVSKKRKTMPQWTEQVKVTSGTALEGTLDDGYCWRKYGQKDILGRNFPRGYYRCTHRHARGCLATKQVQRSHHDPFMFEVTYRGK 907
            S R FP + +S        R     Q     + S+KRK      +Q +       E    D + WRKYGQK I G  +PR YYRC+   ++GCLA KQV+RS+ DP +F VTY G+
Sbjct:  111 SVRVFPPSTSSSVFVFRGQRDQLLQQQSQPPLRSRKRKN-----QQKRTICHVTQENLSSDLWAWRKYGQKPIKGSPYPRNYYRCS--SSKGCLARKQVERSNLDPNIFIVTYTGE 219          
BLAST of DY305455 vs. ExPASy Swiss-Prot
Match: WRK64_ARATH (Probable WRKY transcription factor 64 OS=Arabidopsis thaliana GN=WRKY64 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.186e-11
Identity = 49/172 (28.49%), Postives = 77/172 (44.77%), Query Frame = 2
Query:  395 ITELAQGKELAKRLRNHL-NPSSSPETREFLVQEILSSYEKALSMLNYSHSLQSNKLDITMVESPRSFPNTATSPRSDASDQDYCKDVVSKKRKTMPQWTEQVKVTSGTALEGTLDDGYCWRKYGQKDILGRNFPRGYYRCTHRHARGCLATKQVQRSHHDPFMFEVTYRGK 907
            +  L +G+  A  L+  L N   S ++ E L+  IL+S+  ALS ++    L                      P +++S Q+    V+ +  K      E ++     +     DDG+ WRKYGQK I    + R YYRCT+   + C A K+VQ    +P ++  TY GK
Sbjct:   10 VAALLRGQGCANSLKRLLENHKLSSDSTEPLIYTILNSFSLALSFVDPPSLL----------------------PHNESSLQNMTSHVLQRSSKKKYYGAEDLEYYRDESPTPRPDDGFTWRKYGQKTIKTSPYQRCYYRCTYAKDQNCNARKRVQMIQDNPPVYRTTYLGK 159          
BLAST of DY305455 vs. ExPASy Swiss-Prot
Match: WRK62_ARATH (Probable WRKY transcription factor 62 OS=Arabidopsis thaliana GN=WRKY62 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 9.385e-11
Identity = 49/152 (32.24%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  455 SSSPETREFLVQEILSSYEKALSMLNYSHSLQSNKLDITMVESPRSFPNTATSPRSDASDQDYCKDVVSKKRKT-MPQWTEQVKVTSGTALEGTLDDGYCWRKYGQKDILGRNFPRGYYRCTHRHARGCLATKQVQRSHHDPFMFEVTYRGK 907
            S S   RE L + +L  +  ALS+L  ++  Q +       +S  S P  + SP  ++S     K +  + RKT M + ++  +  S T +     DG+ WRKYGQK I    + R YY+C +   + C A KQVQ+  H+P ++  TY G+
Sbjct:   30 SDSSMEREDLAKSVLHCFSDALSILIDTNDHQDD-------QSNNSSPQDS-SPVLESSR----KPLHKRGRKTSMAESSDYHRHESSTPI---YHDGFLWRKYGQKQIKESEYQRSYYKCAYTKDQNCEAKKQVQKIQHNPPLYSTTYFGQ 166          
The following BLAST results are available for this feature:
BLAST of DY305455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
WRK29_ARATH3.810e-1240.86Probable WRKY transcription factor 29 OS=Arabidops... [more]
WRK27_ARATH8.488e-1238.79Probable WRKY transcription factor 27 OS=Arabidops... [more]
WRK64_ARATH7.186e-1128.49Probable WRKY transcription factor 64 OS=Arabidops... [more]
WRK62_ARATH9.385e-1132.24Probable WRKY transcription factor 62 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AB11RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305455 ID=DY305455; Name=DY305455; organism=Citrus sinensis; type=EST; length=1279bp
GGGAAATCAAAAAACACGACTCAGTCAAAAGTTGATCTCTCTTCCTTCTT
ATTTCTGTCCAATATCCTCTACTCTTTCGCCTCAGCTTCAACTCTCGTTC
ACTACGAAAGCACTTTTCTTCTTTTCTTAATCTTCTTCCTTCAAGTAATC
AATTCGCATGATCTTGATTACTAGAGCACTTGTGTAACCGAATAAAACAA
AATTCAAGATTTAGAGTGGTTTTGGTCACATCCTAGCTCACATTTTGGTT
CCTTTGCTCGTATGAATTGGACTTGCTAGTGATCTCTCTGCTCAGACTCG
TACGGATTCCGGTACTTAGTGTTTCGTCAATTGGTTGCTAGGGAATTGTT
CAGATATGAAAAGGTCGACGATGGATAGGGATCAAAATATTCTTATTACT
GAGCTAGCACAAGGGAAAGAGCTAGCTAAGCGGCTTAGGAATCATCTGAA
TCCATCTTCCTCTCCAGAAACTCGCGAATTCTTAGTACAAGAGATTCTTT
CTTCTTATGAGAAAGCACTTTCAATGCTAAATTATAGTCATTCTCTCCAG
TCCAATAAGCTCGACATCACCATGGTTGAATCACCACGTTCTTTTCCCAA
CACTGCTACTAGCCCAAGAAGCGATGCTTCTGATCAAGACTATTGTAAAG
ATGTCGTATCCAAGAAGAGAAAGACAATGCCTCAATGGACTGAACAAGTA
AAGGTTACCTCGGGGACAGCATTGGAAGGGACTCTTGATGATGGTTATTG
CTGGAGAAAATATGGCCAGAAAGATATTCTTGGTCGTAATTTTCCAAGAG
GGTATTACAGGTGCACCCATCGTCATGCCCGAGGTTGTTTAGCAACTAAA
CAAGTTCAAAGATCCCACCATGACCCCTTCATGTTTGAAGTGACATATCG
AGGGAAAACAAAGTGGTACCAAAACTCTCATTTAAGCTTGGGCTTCGAAT
TCATCAAAAAAGCAAGTGGCCATTGATCAAAAAAAATCTTGGGTGCATCA
AAAAAAAAAAAATGAAAAAAAACCCAAAAAAACCAAAAGGGGGAAAGGCC
CCCCTTTGGAAACAAAAACTAAAAATTAAAAAAGGGGGATTTGGAACCCC
CCCAAAAAAAACCCTTTCCCCCTTTTTTTTTTTCCCTCATGAAAAATTTT
TGGGAAAAAAAAAAAAAAAAAAAGTGTTGAAAAAAAAAATTGGTGTTTTG
TGGGGGGGGATGGAGAAAGAAAAAAAAAAAATATTTCTTTGGGGGGGGGG
GGGTGTTTTTTTTTCCCCCCAACGGATGT
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