DY305448

Overview
NameDY305448
Unique NameDY305448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1286
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12444 contig Csv1_Contig12444:603..1889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GPA1_SOYBN (Guanine nucleotide-binding protein alpha-1 subunit OS=Glycine max GN=GPA1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.467e-16
Identity = 53/159 (33.33%), Postives = 88/159 (55.35%), Query Frame = 3
Query:    6 ISKTGYEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDE--YFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRCEWFE-DFNPV 473
            +S   Y P+  D LYA     T G++ + FS      EN  S           Y+L  V  +   E  KW+ +FE    V+FC +++ YD+  Y +++K    N+M+ +++LF+ ++  P F + +F+L LNK+D+ E+K+  VPL+ CEWF+ D+ PV
Sbjct:  175 LSDANYVPTKEDFLYAR--VRTTGVVEIQFS---PVGENKRSGEV--------YRLFDVGGQR-NERRKWIHLFEGVTAVIFCSAISEYDQTLYEDENK----NRMMETKELFEWVLRQPCFEKTSFMLFLNKFDIFEKKVLNVPLNVCEWFKHDYQPV 315          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GNAO_MANSE (Guanine nucleotide-binding protein G(o) subunit alpha OS=Manduca sexta PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 6.542e-12
Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 3
Query:   21 YEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDEYFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRC 446
            Y+P++ DIL       T G++ + FS                    L+++L  V      E  KW+  FED   ++FCV+++ YD+   + +   TN+M  S +LF +I  +  F   + +L LNK D+ EEKI + PL+ C
Sbjct:  168 YQPTEEDILRTR--VKTTGIVEVHFSFKN-----------------LNFKLFDVGRGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE--TTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIRKSPLTIC 288          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GNAO_LOCMI (Guanine nucleotide-binding protein G(o) subunit alpha OS=Locusta migratoria PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.486e-11
Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 3
Query:   21 YEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDEYFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRC 446
            Y+P++ DIL       T G++ + FS                    L+++L  V  +   E  KW+  FED   ++FCV+++ YD+   + +   TN+M  S +LF +I  +  F   + +L LNK D+ EEKI++ PL+ C
Sbjct:  168 YQPTEQDILRTR--VKTTGIVEVHFSFKN-----------------LNFKLFDVGGQR-SERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE--TTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTIC 287          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GNAO_DROME (Guanine nucleotide-binding protein G(o) subunit alpha 47A OS=Drosophila melanogaster GN=G-oalpha47A PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.247e-11
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 3
Query:   21 YEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDEYFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRC 446
            Y+P++ DIL       T G++ + FS                    L+++L  V  +   E  KW+  FED   ++FCV+++ YD+   + +   TN+M  S +LF +I  +  F   + +L LNK D+ EEKI + PL+ C
Sbjct:  168 YQPTEQDILRTR--VKTTGIVEVHFSFKN-----------------LNFKLFDVGGQR-SERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE--TTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIRKSPLTIC 287          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GNAO_LYMST (Guanine nucleotide-binding protein G(o) subunit alpha OS=Lymnaea stagnalis PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 4.240e-11
Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 3
Query:   21 YEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDEYFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRC 446
            Y P++ DIL       T G++ + FS                    L+++L  V  +   E  KW+  FED   ++FCV+++ YD+   + +   TN+M  S +LF +I  +  F + + +L LNK D+ EEKI++ PL+ C
Sbjct:  168 YMPTEQDILRTR--VKTTGIVEVHFSFKN-----------------LNFKLFDVGGQR-SERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE--TTNRMQESLKLFDSICNNKWFTETSIILFLNKKDLFEEKIKKSPLTIC 287          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GNAO_HELTI (Guanine nucleotide-binding protein G(o) subunit alpha OS=Helisoma trivolvis PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 4.240e-11
Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 3
Query:   21 YEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDEYFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRC 446
            Y P++ DIL       T G++ + FS                    L+++L  V  +   E  KW+  FED   ++FCV+++ YD+   + +   TN+M  S +LF +I  +  F + + +L LNK D+ EEKI++ PL+ C
Sbjct:  168 YMPTEQDILRTR--VKTTGIVEVHFSFKN-----------------LNFKLFDVGGQR-SERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE--TTNRMQESLKLFDSICNNKWFTETSIILFLNKKDLFEEKIKKSPLTIC 287          
BLAST of DY305448 vs. ExPASy Swiss-Prot
Match: GNAO_CAEEL (Guanine nucleotide-binding protein G(o) subunit alpha OS=Caenorhabditis elegans GN=goa-1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 7.233e-11
Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = 3
Query:   21 YEPSDMDILYAEEITSTNGLLSMLFSLPEQTQENSISDSSDQNDPLLSYQLIRVHPRSLGENCKWLQMFEDADMVLFCVSLTAYDEYFEDSKGFLTNKMLASRQLFQNIVIHPTFNQKNFLLILNKYDMLEEKIEEVPLSRC 446
            Y+P++ DIL       T G++ + F+                    L+++L  V  +   E  KW+  FED   ++FCV+++ YD+   + +   TN+M  S +LF +I  +  F   + +L LNK D+ EEKI++ PL+ C
Sbjct:  168 YQPTEQDILRTR--VKTTGIVEVHFTFKN-----------------LNFKLFDVGGQR-SERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE--TTNRMHESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTIC 287          
The following BLAST results are available for this feature:
BLAST of DY305448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GPA1_SOYBN7.467e-1633.33Guanine nucleotide-binding protein alpha-1 subunit... [more]
GNAO_MANSE6.542e-1230.28Guanine nucleotide-binding protein G(o) subunit al... [more]
GNAO_LOCMI2.486e-1130.28Guanine nucleotide-binding protein G(o) subunit al... [more]
GNAO_DROME3.247e-1130.28Guanine nucleotide-binding protein G(o) subunit al... [more]
GNAO_LYMST4.240e-1130.28Guanine nucleotide-binding protein G(o) subunit al... [more]
GNAO_HELTI4.240e-1130.28Guanine nucleotide-binding protein G(o) subunit al... [more]
GNAO_CAEEL7.233e-1129.58Guanine nucleotide-binding protein G(o) subunit al... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AB02RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305448 ID=DY305448; Name=DY305448; organism=Citrus sinensis; type=EST; length=1286bp
GTGAGATTTCAAAGACAGGCTATGAGCCCTCAGATATGGATATCTTGTAT
GCTGAGGAAATTACGTCAACCAATGGGCTTTTGTCCATGTTATTTTCATT
ACCAGAGCAAACACAAGAGAACTCCATAAGTGACTCTTCCGATCAGAATG
ATCCCTTGCTCAGCTATCAACTCATTAGAGTGCATCCAAGAAGCCTCGGG
GAGAACTGCAAGTGGCTACAAATGTTTGAAGATGCTGATATGGTCCTCTT
TTGTGTTTCTTTGACTGCCTACGATGAATATTTTGAAGATAGCAAAGGAT
TTCTCACCAACAAGATGTTGGCAAGCAGGCAGCTCTTCCAAAACATTGTC
ATTCATCCAACCTTCAATCAAAAGAACTTCCTTCTGATACTCAACAAGTA
TGATATGTTAGAGGAAAAGATTGAAGAAGTTCCTCTCTCTCGATGTGAGT
GGTTTGAAGACTTCAATCCGGTGATCAGCCATAATCACCATAGCACTAGT
AGAAGAACTAGCAACACACCACTGGCTGTATCTGCTGCCCACTACATTGC
AGTGAAGTTCAAGAGGTTGTTCGATTCTCTAACTGGTCGTAAGTTGTTTG
TTTCAGTAGTTACTGCCTTGGAGCCTGAGACTGTAGATGAAGCTCTCAAA
TATGCAAAGGAGATTCTGAAGTGGGAGGAAGAGGAACCTGTCTACACTAA
CATTGAGTCAACTGATTACGAGGCAAGCTCATCATCGTGAATTTTCTTCT
CGGGTTGAATTTTGCTCATCCATCCTCAGTTATACAAAACATTAAAAAGG
ATTTTATTTTTTCCAAAATAGAACTGAAGAACATCAGAAGAAAATACCTA
GGGTCAAGCCCATGCTTGGGTTATCTAATCCAGATTTGGATAAAAATTAG
GGGAAATAAGAATCTTTTCATAAACTTTTAAAAAATTTCCCTTTTGCCTT
TTTCAAAAAAAAAAAAAAAAAAAATCGAAGGGGGGGCCCCGGGTACCCAA
TTTCCCCCTAAAATGGATCCATATTCTATTTCCCTGGCCGCCTCTTTTTC
AACCGTCGTGAAAGGGGAAAACCCTTTGAGGTAAACACACTTTTACTCCC
TCTTTCACCCCATCCCTCCCTTCTTCCCCCCGCGGCGAAAATAAACAAAA
AAAAGCCCCCCCCACAATCTACCCTCTTCTCCCCAAAAGTGTTCCCCCCC
CCCCTAGTGGGGGGGAGAAAGAGTGAAAATTTTATATAAGCCCAGTTTTA
ATATATTATTTTTTTTTTATTAAATTATTCTCCCTC
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