EY702533

Overview
NameEY702533
Unique NameEY702533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHP_SCHPO (Probable isocitrate dehydrogenase [NADP], mitochondrial OS=Schizosaccharomyces pombe GN=idp1 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.635e-73
Identity = 128/213 (60.09%), Postives = 162/213 (76.06%), Query Frame = 3
Query:  153 AFQKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQK 791
            +FQKI   NP+VEMDGDEMTRV WK I++KL+ P++++ + Y+DLG+  RD T+D++TV++A+A LK +V IKCATITPDEARVKE+ LK+MWKSPNGTIRNILNGTVFREPI+ KN+P+ IPGWT PICIGRHAFGDQY++TD V  GPGKL+L F P+G     E        G G A+SMYN D++IR F   S  MA+++  P  L  K
Sbjct:   10 SFQKITVKNPVVEMDGDEMTRVIWKIIREKLVLPYMDIKLDYYDLGIEARDKTNDQITVDAAKAILKNDVGIKCATITPDEARVKEYNLKKMWKSPNGTIRNILNGTVFREPILIKNIPKYIPGWTNPICIGRHAFGDQYKSTDLVASGPGKLELSFTPKGNPSAKETYNVYEFNGSGVAMSMYNTDDSIRGFAHSSFQMALQKKMPLYLSTK 222          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_BOVIN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos taurus GN=IDH1 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.084e-72
Identity = 135/228 (59.21%), Postives = 170/228 (74.56%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            QKI+G + +VEM GDEMTR+ W+ IK+KLIFP++ELD+  +DLG+ NRDAT+D+VT ++AEA  KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P     KT    +NFT  GG A+ MYN D++I  F   S  MA+ ++ P  L  K       DG RF++IF+
Sbjct:    3 QKIQGGS-VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEISYTPSDGSPKTVYLVHNFTESGGVAMGMYNQDKSIEDFAHSSFQMALSKNWPLYLSTKNTILKKYDG-RFKDIFQ 228          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHP_ASPNG (Isocitrate dehydrogenase [NADP], mitochondrial OS=Aspergillus niger GN=icdA PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.028e-72
Identity = 138/227 (60.79%), Postives = 171/227 (75.33%), Query Frame = 3
Query:  162 KIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            KIK  NP+VE+DGDEMTR+ W+ I++KLI P+L++D+KY+DLGL  RD TDD+VTVE+AEA  KY V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GTVFREPII   +PRL+PGW KPI IGRHAFGDQYRATD VI GPGKL+LV+ P   + +T ++ Y+F  GGG A + YN DE+IR F   S  MA+ +  P  +  K       DG RF++IF+
Sbjct:   92 KIKVKNPVVELDGDEMTRIIWQEIREKLILPYLDVDLKYYDLGLEYRDQTDDQVTVEAAEAIKKYGVGVKCATITPDEARVEEFKLKKMWLSPNGTIRNILGGTVFREPIIIPAIPRLVPGWNKPIIIGRHAFGDQYRATDRVIPGPGKLELVYTPVNGEPET-VKVYDFQ-GGGIAQTQYNTDESIRGFAHASFQMALLKGLPLYMSTKNTILKRYDG-RFKDIFQ 315          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_PONAB (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pongo abelii GN=IDH1 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.531e-71
Identity = 133/228 (58.33%), Postives = 168/228 (73.68%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            +KI G + +VEM GDEMTR+ W+ IK+KLIFP++ELD+  +DLG+ NRDAT+D+VT ++AEA  KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P    +K     +NF  GGG A+ MYN D++I  F   S  MA+ +  P  L  K       DG RF++IF+
Sbjct:    3 KKISGGS-VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDG-RFKDIFQ 228          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_HUMAN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens GN=IDH1 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 5.817e-71
Identity = 132/228 (57.89%), Postives = 168/228 (73.68%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            +KI G + +VEM GDEMTR+ W+ IK+KLIFP++ELD+  +DLG+ NRDAT+D+VT ++AEA  K+NV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P    +K     +NF  GGG A+ MYN D++I  F   S  MA+ +  P  L  K       DG RF++IF+
Sbjct:    3 KKISGGS-VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDG-RFKDIFQ 228          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 9.922e-71
Identity = 132/228 (57.89%), Postives = 168/228 (73.68%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            +KI G + +VEM GDEMTR+ W+ IK+KLI P++ELD+  +DLG+ NRDAT+D+VT ++AEA  KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ F P+   +K     ++F  GGG A+ MYN D++I  F   S  MA+ +  P  L  K       DG RF++IF+
Sbjct:    3 KKIHGGS-VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITFTPKDGSQKVTYLVHSFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDG-RFKDIFQ 228          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDH2_CANTR (Isocitrate dehydrogenase [NADP] peroxisomal OS=Candida tropicalis GN=IDP2 PE=1 SV=3)

HSP 1 Score: 266.929 bits (681), Expect = 9.922e-71
Identity = 138/232 (59.48%), Postives = 164/232 (70.69%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRR-----SGPSILRQKPYP*EDG*RFQNIFRG 839
            QKI   NPIVEMDGDEMTR+ W+ IKDKLI P+L +D+KY+DLG+  RD TDDKVT ++AEA L+Y V +KCATITPDEARVKEF LK+MW SPNGT+RN++ GTVFREPI+  N+PR++P W KPI IGRHAFGDQY+ATD VI   G LKLVF P+   E  E   Y F  G G ALSMYN D +I  F E S  +AI R     S       K Y   DG +F++IF G
Sbjct:    5 QKITVKNPIVEMDGDEMTRIIWQFIKDKLILPYLNVDLKYYDLGIEYRDKTDDKVTTDAAEAILQYGVGVKCATITPDEARVKEFNLKKMWLSPNGTLRNVIGGTVFREPIVIDNIPRIVPSWEKPIIIGRHAFGDQYKATDVVIPAAGDLKLVFKPKDGGEVQEFPVYQF-DGPGVALSMYNTDASITDFAESSFQLAIERKLNLFSSTKNTILKKY---DG-KFKDIFEG 231          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.296e-70
Identity = 131/228 (57.46%), Postives = 169/228 (74.12%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            +KI+G + +VEM GDEMTR+ W+ IK+KLI P++ELD+  +DLG+ NRDAT+D+VT ++AEA  KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+   +K     ++F  GGG A+ MYN D++I  F   S  MA+ +  P  L  K       DG RF++IF+
Sbjct:    3 RKIQGGS-VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGTQKVTYMVHDFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDG-RFKDIFQ 228          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.210e-70
Identity = 131/228 (57.46%), Postives = 168/228 (73.68%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            +KI G + +VEM GDEMTR+ W+ IK+KLI P++ELD+  +DLG+ NRDAT+D+VT ++AEA  KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+   +K     ++F  GGG A+ MYN D++I  F   S  MA+ +  P  L  K       DG RF++IF+
Sbjct:    3 RKIHGGS-VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHDFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDG-RFKDIFQ 228          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.210e-70
Identity = 131/228 (57.46%), Postives = 168/228 (73.68%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            +KI G + +VEM GDEMTR+ W+ IK+KLI P++ELD+  +DLG+ NRDAT+D+VT ++AEA  KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P+   +K     ++F  GGG A+ MYN D++I  F   S  MA+ +  P  L  K       DG RF++IF+
Sbjct:    3 KKIHGGS-VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHSFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDG-RFKDIFQ 228          
The following BLAST results are available for this feature:
BLAST of EY702533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
IDHP_SCHPO1.635e-7360.09Probable isocitrate dehydrogenase [NADP], mitochon... [more]
IDHC_BOVIN3.084e-7259.21Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos... [more]
IDHP_ASPNG4.028e-7260.79Isocitrate dehydrogenase [NADP], mitochondrial OS=... [more]
IDHC_PONAB1.531e-7158.33Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pon... [more]
IDHC_HUMAN5.817e-7157.89Isocitrate dehydrogenase [NADP] cytoplasmic OS=Hom... [more]
IDHC_MICME9.922e-7157.89Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mic... [more]
IDH2_CANTR9.922e-7159.48Isocitrate dehydrogenase [NADP] peroxisomal OS=Can... [more]
IDHC_MOUSE1.296e-7057.46Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus... [more]
IDHC_RAT2.210e-7057.46Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rat... [more]
IDHC_MICOH2.210e-7057.46Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-B06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702533 ID=EY702533; Name=EY702533; organism=Citrus sinensis; type=EST; length=849bp
CTCGAAAGCAGAAGCATTTCAATTTTCATAGTATTATTATTATTATTGCT
TCTTGCTGCTTCTTTTTGTCCACACGACCTCGGCACCTCCGCTCTGACCC
TATTATCTCTCTCTAGTTGGGAATCAACCGAAACTGAACAAAGAAGAAAA
TGGCTTTTCAGAAGATCAAGGGCGCCAATCCCATCGTCGAAATGGACGGA
GATGAAATGACTCGAGTTTTCTGGAAATCGATTAAGGATAAGCTTATTTT
CCCTTTTCTGGAGTTGGACATAAAGTACTTCGACCTTGGCCTTCCGAATC
GTGATGCAACTGATGACAAAGTTACCGTTGAAAGTGCAGAAGCCACTCTC
AAGTACAATGTAGCGATCAAGTGTGCTACTATTACTCCAGATGAAGCTCG
TGTTAAGGAATTTGTCTTGAAACAGATGTGGAAGAGTCCAAATGGGACAA
TCAGGAATATTTTGAATGGCACTGTTTTCAGAGAACCAATCATTTGCAAA
AATGTCCCTCGGCTTATTCCAGGCTGGACAAAGCCCATATGCATTGGCAG
GCATGCTTTTGGTGATCAATATCGAGCAACTGATACAGTTATTCAAGGAC
CTGGCAAACTTAAATTGGTGTTTGTACCAGAGGGAAAAGATGAGAAGACA
GAGTTAGAGGGTTACAACTTTACCGGGGGAGGGGGAGGTGCATTGTCCAT
GTATAACCCTGATGAGGCCATCCGAGCCTTTGGTGAGGGTTCTATGAACA
TGGCTATCAGAAGAAGTGGCCCCTCTATCTTAAGACAAAAACCCTATCCT
TAAGAAGATGGATGAAGATTCCAGAACATTTTCAGAGGGTTTGGGCGAA
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