EY702533

Overview
NameEY702533
Unique NameEY702533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_SHEEP (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovis aries GN=IDH1 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.887e-70
Identity = 131/227 (57.71%), Postives = 168/227 (74.01%), Query Frame = 3
Query:  162 KIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            KI+G + +VEM GDEMTR+ W+ IK+KLIFP+++LD+  +DL + NRDAT+D+VT ++AEA  KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ GW KPI IGRHA+GDQYRATD V+ GPGK+++ + P     KT    +NFT  GG A+ M+N D++I  F   S  MA+ ++ P  L  K       DG RF++IF+
Sbjct:    4 KIQGGS-VVEMQGDEMTRIIWELIKEKLIFPYVDLDLHSYDLSIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEICYTPSDGSPKTVYLVHNFTESGGVAMGMFNQDKSIEDFAHSSFQMALSKNWPLYLSTKNTILKKYDG-RFKDIFQ 228          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDH1_CANTR (Isocitrate dehydrogenase [NADP], mitochondrial OS=Candida tropicalis GN=IDP1 PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 6.431e-70
Identity = 133/227 (58.59%), Postives = 167/227 (73.57%), Query Frame = 3
Query:  162 KIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            KIK  NPIVE+DGDEMTR+ W+ IKD+LI P+L++D+KY+DLG+ +RDATDD++T+++A A  +Y V +KCATITPDEARVKEF LK+MW SPNGTIRNIL GTVFRE II   +PRLIPGW KPI IGRHAFGDQY+ATD VI  PG+L+L F P    E    + Y++TG G G L+MYN DE+I  F   S  MA+ +  P  +  K       DG RF++IF+
Sbjct:   29 KIKVKNPIVELDGDEMTRIIWQKIKDQLILPYLDVDLKYYDLGIESRDATDDQITIDAANAIKEYGVGVKCATITPDEARVKEFHLKKMWLSPNGTIRNILGGTVFRESIIIPCIPRLIPGWEKPIVIGRHAFGDQYKATDLVINEPGRLELRFTPASGGEAQTQKVYDYTGPGVG-LAMYNTDESITGFAHASFKMALAKGLPLYMSTKNTILKKYDG-RFKDIFQ 253          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHH_YEAST (Isocitrate dehydrogenase [NADP] OS=Saccharomyces cerevisiae GN=IDP3 PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.192e-69
Identity = 125/210 (59.52%), Postives = 158/210 (75.24%), Query Frame = 3
Query:  162 KIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQK 791
            KIK  +PIVEMDGDE TRV WK IK+KLI P+L++D+KY+DL +  RD T+D+VT +S+ ATLKY VA+KCATITPDEAR+KEF LK+MWKSPNGTIRNIL GTVFREPII   +PRL+P W KPI IGRHAFGDQYRATD  I+  GKL+L F  +   E  +L+ Y F   GG A++M+N +++I+ F + S  +A++R  P     K
Sbjct:    3 KIKVVHPIVEMDGDEQTRVIWKLIKEKLILPYLDVDLKYYDLSIQERDRTNDQVTKDSSYATLKYGVAVKCATITPDEARMKEFNLKEMWKSPNGTIRNILGGTVFREPIIIPKIPRLVPHWEKPIIIGRHAFGDQYRATDIKIKKAGKLRLQFSSDDGKENIDLKVYEFPKSGGIAMAMFNTNDSIKGFAKASFELALKRKLPLFFTTK 212          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_YEAST (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Saccharomyces cerevisiae GN=IDP2 PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 3.529e-68
Identity = 121/204 (59.31%), Postives = 155/204 (75.98%), Query Frame = 3
Query:  162 KIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGP 773
            KIK ANPIVEMDGDE TR+ W  I+DKL+ P+L++D+KY+DL +  RD T+D+VTV+SA ATLKY VA+KCATITPDEARV+EF LK+MWKSPNGTIRNIL GTVFREPII   +PRL+P W KPI IGRHAFGDQY+ATD ++   G+L+LV+  +      +L+ +++   GG A+ MYN  ++I  F + S  +AI R  P
Sbjct:    3 KIKVANPIVEMDGDEQTRIIWHLIRDKLVLPYLDVDLKYYDLSVEYRDQTNDQVTVDSATATLKYGVAVKCATITPDEARVEEFHLKKMWKSPNGTIRNILGGTVFREPIIIPRIPRLVPQWEKPIIIGRHAFGDQYKATDVIVPEEGELRLVYKSKSGTHDVDLKVFDYPEHGGVAMMMYNTTDSIEGFAKASFELAIERKLP 206          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHP_DICDI (Isocitrate dehydrogenase [NADP], mitochondrial OS=Dictyostelium discoideum GN=idhM PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.027e-67
Identity = 123/211 (58.29%), Postives = 157/211 (74.41%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQK 791
            ++IK   P+VEMDGDE TR+ W+SIK KLIFP++++  +Y+DLGLPNRDAT+D+VT+++A A  +  + +KCATITPDEARVKEF LK+MWKSPNGTIRNIL+GTVFR PIICKN+P L+PGW KPI IGRHA GDQY+ATD V+ GPGKL+++F P  + E  +   Y+F  G G A+ MYN   +I AF       AI +  P  L  K
Sbjct:   25 KRIKVTGPVVEMDGDEQTRIMWESIKSKLIFPYVDITPEYYDLGLPNRDATNDQVTIDAANAIKRAKIGVKCATITPDEARVKEFGLKEMWKSPNGTIRNILDGTVFRGPIICKNLPLLVPGWKKPIIIGRHAHGDQYKATDFVVNGPGKLEMIFTP-SQGEPIKKVIYDFK-GSGVAMGMYNTTSSITAFAHSCFQYAIDKKYPLYLSTK 233          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHP_YEAST (Isocitrate dehydrogenase [NADP], mitochondrial OS=Saccharomyces cerevisiae GN=IDP1 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.751e-67
Identity = 124/209 (59.33%), Postives = 154/209 (73.68%), Query Frame = 3
Query:  138 TKKKMAFQKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKD--EKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAI 758
            T +  AF KIK   P+VE+DGDEMTR+ W  IK KLI P+L++D+KY+DL + +RDAT DK+T ++AEA  KY V IKCATITPDEARVKEF L +MWKSPNGTIRNIL GTVFREPI+   +PRL+P W KPI IGRHA GDQY+ATDT+I GPG L+LV+ P      +   L+ Y++  G G A++MYN DE+I  F   S  +AI
Sbjct:   11 TSRLAAFSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEFNLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSDPTTAQPQTLKVYDYK-GSGVAMAMYNTDESIEGFAHSSFKLAI 218          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDH_SPHYA (Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.135e-65
Identity = 118/210 (56.19%), Postives = 153/210 (72.86%), Query Frame = 3
Query:  162 KIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQK 791
            KIK  NP+VE+DGDEMTR+ W+ I+++LI P+L++D+KY+DL +  RD T D++T+++A A  +Y V +KCATITPDEARV+EF LK+MWKSPNGTIRNIL G VFREPI+ KNVPRL+PGWT PI +GRHAFGDQY+ATD  + G G L + +V     E+ E E + F    G A+ MYN DE+IR F + S N  + R  P  L  K
Sbjct:    3 KIKVKNPVVEIDGDEMTRIIWEWIRERLILPYLDVDLKYYDLSVEKRDETSDQITIDAANAIKEYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDPIVVGRHAFGDQYKATDFKVPGAGTLTMKWVGT-NGEELEYEVFEFP-SAGVAMGMYNLDESIRDFAKASFNYGLNRGWPVYLSTK 210          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDH_MYCTU (Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis GN=icd PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.812e-64
Identity = 119/210 (56.67%), Postives = 147/210 (70.00%), Query Frame = 3
Query:  162 KIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQK 791
            KIK + P+VE+DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A  K+ V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GT+FREPI+  NVPRL+PGWTKPI IGRHAFGDQYRAT+  +  PG + L F P         E  +    GG  L MYN  E+IR F   S +  +    P  L  K
Sbjct:    6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMYNFKESIRDFARASFSYGLNAKWPVYLSTK 215          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDH_MYCBO (Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis GN=icd PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.812e-64
Identity = 119/210 (56.67%), Postives = 147/210 (70.00%), Query Frame = 3
Query:  162 KIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQK 791
            KIK + P+VE+DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A  K+ V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GT+FREPI+  NVPRL+PGWTKPI IGRHAFGDQYRAT+  +  PG + L F P         E  +    GG  L MYN  E+IR F   S +  +    P  L  K
Sbjct:    6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMYNFKESIRDFARASFSYGLNAKWPVYLSTK 215          
BLAST of EY702533 vs. ExPASy Swiss-Prot
Match: IDHC_DICDI (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium discoideum GN=idhC PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.215e-62
Identity = 120/228 (52.63%), Postives = 156/228 (68.42%), Query Frame = 3
Query:  159 QKIKGANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEGYNFTGGGGGALSMYNPDEAIRAFGEGSMNMAIRRSGPSILRQKP--YP*EDG*RFQNIFR 836
            +KI  +NP+  + GDE TRV W  I+ KLIFPFL+L ++ +DLG+  RD T+D+VT+++A A  +  V IKCATITPDEARV EF LK+MWKSPNGTIRN L GT+FREPI+CKNVPRL+  W K I IGRHAFGDQYRATD V++G GKL+L + P       + + ++F   GG AL MYN D +I+ F     N ++ +  P  L  K       DG RF++IF+
Sbjct:    3 EKIIVSNPVANLLGDEQTRVIWDLIEKKLIFPFLDLKVETYDLGIEYRDKTNDQVTIDAANAIKRLKVGIKCATITPDEARVTEFGLKEMWKSPNGTIRNTLGGTLFREPIVCKNVPRLVTCWNKSIVIGRHAFGDQYRATDFVVKGAGKLELTYTPADGSAPQKFQVFDFPSDGGVALGMYNTDASIKEFAYACFNFSLDKKWPLYLSTKNTILKRYDG-RFKDIFQ 229          
The following BLAST results are available for this feature:
BLAST of EY702533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
IDHC_SHEEP2.887e-7057.71Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovi... [more]
IDH1_CANTR6.431e-7058.59Isocitrate dehydrogenase [NADP], mitochondrial OS=... [more]
IDHH_YEAST3.192e-6959.52Isocitrate dehydrogenase [NADP] OS=Saccharomyces c... [more]
IDHC_YEAST3.529e-6859.31Isocitrate dehydrogenase [NADP] cytoplasmic OS=Sac... [more]
IDHP_DICDI1.027e-6758.29Isocitrate dehydrogenase [NADP], mitochondrial OS=... [more]
IDHP_YEAST1.751e-6759.33Isocitrate dehydrogenase [NADP], mitochondrial OS=... [more]
IDH_SPHYA8.135e-6556.19Isocitrate dehydrogenase [NADP] OS=Sphingomonas ya... [more]
IDH_MYCTU1.812e-6456.67Isocitrate dehydrogenase [NADP] OS=Mycobacterium t... [more]
IDH_MYCBO1.812e-6456.67Isocitrate dehydrogenase [NADP] OS=Mycobacterium b... [more]
IDHC_DICDI2.215e-6252.63Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-B06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702533 ID=EY702533; Name=EY702533; organism=Citrus sinensis; type=EST; length=849bp
CTCGAAAGCAGAAGCATTTCAATTTTCATAGTATTATTATTATTATTGCT
TCTTGCTGCTTCTTTTTGTCCACACGACCTCGGCACCTCCGCTCTGACCC
TATTATCTCTCTCTAGTTGGGAATCAACCGAAACTGAACAAAGAAGAAAA
TGGCTTTTCAGAAGATCAAGGGCGCCAATCCCATCGTCGAAATGGACGGA
GATGAAATGACTCGAGTTTTCTGGAAATCGATTAAGGATAAGCTTATTTT
CCCTTTTCTGGAGTTGGACATAAAGTACTTCGACCTTGGCCTTCCGAATC
GTGATGCAACTGATGACAAAGTTACCGTTGAAAGTGCAGAAGCCACTCTC
AAGTACAATGTAGCGATCAAGTGTGCTACTATTACTCCAGATGAAGCTCG
TGTTAAGGAATTTGTCTTGAAACAGATGTGGAAGAGTCCAAATGGGACAA
TCAGGAATATTTTGAATGGCACTGTTTTCAGAGAACCAATCATTTGCAAA
AATGTCCCTCGGCTTATTCCAGGCTGGACAAAGCCCATATGCATTGGCAG
GCATGCTTTTGGTGATCAATATCGAGCAACTGATACAGTTATTCAAGGAC
CTGGCAAACTTAAATTGGTGTTTGTACCAGAGGGAAAAGATGAGAAGACA
GAGTTAGAGGGTTACAACTTTACCGGGGGAGGGGGAGGTGCATTGTCCAT
GTATAACCCTGATGAGGCCATCCGAGCCTTTGGTGAGGGTTCTATGAACA
TGGCTATCAGAAGAAGTGGCCCCTCTATCTTAAGACAAAAACCCTATCCT
TAAGAAGATGGATGAAGATTCCAGAACATTTTCAGAGGGTTTGGGCGAA
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