DY305445

Overview
NameDY305445
Unique NameDY305445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1260
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 5.009e-25
Identity = 77/245 (31.43%), Postives = 120/245 (48.98%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRD--QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGSLDLL 875
            ++   V + G+CH+DLH  K +W  +T  P+V GHE  GVV  +G  V+ +++GD  G+  + GSC  C+ C    E+ CP   +  +   HDG+     +     AD     RIP+GT L   AP+LCAGITVY  L+   L                    ++AKAMG +V  I    + K E  + LGA+    FL S+D   D ++A  G   G+I+   +   +   +  ++  G++ L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADL--SGYTHDGS-----FQQYATADAIQAARIPKGTDLALIAPILCAGITVYKALKTAQLQAGQWVAVSGAAGGLGSLAIQYAKAMGYRVVGID-GGADKGEFAKSLGAEVFVDFLSSKDVVADVLKATNGGAHGVINVSVSERAMQQSVDYVRPTGTVVLV 269          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 5.009e-25
Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 3
Query:  150 GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 743
            G  ++  KV + G+CH+DLH +K +W   +  P+V GHE  GVV   G  V++F++GD  G+  + GSC +C+ C    E  CP   ++       G    G +    +       ++P+  PLDA AP+LCAGITVY  L+  G+                    ++AKAMG++V  I     K++   E+LGA++++
Sbjct:   30 GPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASLS-------GYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGVRPGQTVAIVGAGGGLGSLALQYAKAMGIRVVAIDGGEEKQA-MCEQLGAEAYV 220          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 2.486e-24
Identity = 65/196 (33.16%), Postives = 99/196 (50.51%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 743
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  + +GD  G+  + GSC SC+ C +  E+ CP   +  +   HDG+     +     AD     RIP+GT L   AP+LCAG+TVY  L+   L                    ++AKAMG +V  I     +K + +++LG ++F+
Sbjct:   59 EILINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALKSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVVGID-GGEEKGKLVKQLGGEAFV 246          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.486e-24
Identity = 71/214 (33.18%), Postives = 107/214 (50.00%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDG 794
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  +KVGD  GV  + GSC +C+ C    E  C +  +  +   HDG+     +     AD     RIP GT L   AP+LCAG+TVY  L+   L+                   ++AKAMG +V  I      K E ++ LGA++F+  ++++D ++A     +G
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAEADL--SGYTHDGS-----FQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALKTAELEAGQWVAISGAAGGLGSLAVQYAKAMGYRVLAID-GGEDKGEFVKSLGAETFIDFTKEKDVVEAVKKATNG 238          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.486e-24
Identity = 72/245 (29.39%), Postives = 119/245 (48.57%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-----VSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGSLDLL 875
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC SC+ C +  E+ CP+  +  +   HDG+     +     AD     +IP GT L   AP+LCAG+TVY  L+   L                    ++AKAMG +V  I     +K++  + LG + F+      +  ++ ++A  G   G+I+   +   +      ++S G++ L+
Sbjct:   35 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADL--SGYTHDGS-----FQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALKSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVLGIDAG-EEKAKLFKDLGGEYFIDFTKSKNIPEEVIEATKGGAHGVINVSVSEFAIEQSTNYVRSNGTVVLV 271          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.246e-24
Identity = 66/201 (32.84%), Postives = 99/201 (49.25%), Query Frame = 3
Query:  150 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSK--FKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 743
            G  ++  K+ + G+CH+DLH +K +W   +  P++ GHE  GVV   G  V    FK+GD+ G+  + GSC SC+ C    E  CP   ++       G    G +    +       +IP+  PLDA AP+LCAGITVY  L+  G                     ++AKAMG++   I +   KK+   E+LGA+ F+
Sbjct:   30 GPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASLS-------GYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESGARPGQTVAIVGAGGGLGSLAQQYAKAMGLRTIAIDSGDEKKA-MCEQLGAEVFI 222          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.240e-24
Identity = 69/203 (33.99%), Postives = 104/203 (51.23%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRD 755
            ++   V + G+CH+DLH  K +W  +T  P+V GHE  GVV  +GS V+ +++GD  G+  + GSC +C+ C    E  C K  +  +   HDG+     +     AD     R+P+GT L   AP+LCAGITVY  L+   +                    ++AKAMG +V  I     +K E ++ LGA++   F VS+D
Sbjct:   33 EILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADL--SGYTHDGS-----FQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALKTAQIQPGNWVCISGAGGGLGSLAIQYAKAMGFRVIAID-GGEEKGEFVKSLGAEAYVDFTVSKD 227          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 5.538e-24
Identity = 69/214 (32.24%), Postives = 106/214 (49.53%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDG 794
            ++   V + G+CH+DLH    +W   T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     + +   AD      IP+GT L   AP+LCAGITVY  L+   L                    ++AKAMG +V  I   P K+ E    LG + F+  ++++D + A +   +G
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALKSANLRAGHWAAISGAAGGLGSLAVQYAKAMGYRVLGIDGGPGKE-ELFTSLGGEVFIDFTKEKDIVSAVVKATNG 238          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 5.538e-24
Identity = 74/245 (30.20%), Postives = 118/245 (48.16%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRD--QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGSLDLL 875
            ++   V + G+CH+DLH  K +W  +T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     +     AD      IP GT L   AP+LCAG+TVY  L+   +                    ++AKAMG +V  I     K+ E  + LG + F+    S+D   + ++A  G   G+I+   +   +   I   +S G++ L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALKTAEMKAGDWVAISGAAGGLGSLAVQYAKAMGFRVLGIDGGEGKE-ELFKSLGGEVFIDFTKSKDIVGEVIKATNGGAHGVINVSVSEKAIESSIEYCRSNGTVVLV 269          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.538e-24
Identity = 69/214 (32.24%), Postives = 108/214 (50.47%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDG 794
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC SC+ C    E  C +  +  +   HDG+     +     AD     +IP GT L   AP+LCAG+TVY  L+   L                    ++A+AMG++V  I     +K E ++ LGA++++  ++D+D ++A     DG
Sbjct:   35 ELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNCGEADL--SGYTHDGS-----FEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALKTADLAAGQWVAISGAGGGLGSLAVQYARAMGLRVVAID-GGDEKGEFVKSLGAEAYVDFTKDKDIVEAVKKATDG 240          
The following BLAST results are available for this feature:
BLAST of DY305445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ADH2_PICST5.009e-2531.43Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]
ADH1_ASPFN5.009e-2532.16Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH3_KLULA2.486e-2433.16Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]
ADH2_CANAL2.486e-2433.18Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH1_KLULA2.486e-2429.39Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
ADH3_EMENI3.246e-2432.84Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH1_PICST4.240e-2433.99Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH2_YEAST5.538e-2432.24Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH2_KLUMA5.538e-2430.20Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
ADH1_CANAL5.538e-2432.24Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM1AA06RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305445 ID=DY305445; Name=DY305445; organism=Citrus sinensis; type=EST; length=1260bp
GAAACTAAGCCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGG
CAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAA
GGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGG
GAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATTCA
GATCTTCACATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGT
CCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGA
GTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCA
TGCCACTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAA
AGTTATAATGACCTATGCCAACAAGTACCATGATGGAACCATCACATACG
GAGGCTACTCTGACATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATT
CCTGAAGGCACACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTAT
CACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGC
ATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAAATTC
GCAAAGGCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTAGCAA
GAAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTC
GTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATTATC
GATACAGTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGTTGAA
ATCCCAAGGAAGCTTGGACTTGTTGGTGGACCAAAAGAACCCCGGAACTA
CCACCTTCTCCCTGCTCAGGGGAAGAAAAAATTTGGGGGCACCATAATTG
GGGGGAAAAAGGAAATCAAAAAAATAATGATTTTGCCGGCAAACAAAACA
TCCAAAACTGAATTGAGGGTCAAACCGGCCCAATATGGAAAACCACCCCT
GGAACCCCCTTCTAAAACCCAAGTTAAAAATTCCCTTTTTTTCATCACCC
TTTGCAAAACAACAAGAAAACCCCCCCCCCTTAAAAATTTTTTTTTCCTT
TTTTGTTTTTGCCCCTATAAAAAAGAAAAGGAAAGGGGGGGTGTTTTATT
TTTTGTCCAGGGACCCACACCCACCCTCCCCTCCAAATAATATATTTAAT
ATAATAAAAT
back to top