DY305445

Overview
NameDY305445
Unique NameDY305445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1260
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH_STAA3 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=adh PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.275e-20
Identity = 69/259 (26.64%), Postives = 117/259 (45.17%), Query Frame = 3
Query:  141 RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPLMPLIGLLKSQG---SLDLLVDQKN 890
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                ++AK  MG K+     +  K + A E LGAD+ + S+D D +   M       +D  + T  A  P    + ++K+     ++ L VD+ N
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMN 268          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH1_CAEEL (Alcohol dehydrogenase 1 OS=Caenorhabditis elegans GN=sodh-1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.321e-17
Identity = 65/244 (26.64%), Postives = 118/244 (48.36%), Query Frame = 3
Query:  153 EKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM-----QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGSL 866
            + ++  K+ + GICHSDLH+   +  + ++ P+V GHE  G V ++G  V+ +++GDK GV  M  +C +C+ C    E  C  +     N   D + T+  Y  I   D     +I + T L A AP+LCAG+TVY  L+   +    +               ++A AMG++  V++     K    + LGA+ F+ + +  ++     +   G   G+I+   A  P+   +  ++ +G++
Sbjct:   33 DDEILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHI----QNYGFDRSGTFQEYLTIRGVD---AAKINKDTNLAAAAPILCAGVTVYKALKESNVAPGQIIVLTGAGGGLGSLAIQYACAMGMR--VVAMDHGSKEAHCKGLGAEWFVDAFETPDIVSHITKLTEGGPHGVINFAVARKPMEQAVEYVRKRGTV 267          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADHP_ECOLI (Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.250e-16
Identity = 56/208 (26.92%), Postives = 93/208 (44.71%), Query Frame = 3
Query:  141 RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 761
            R+    +   K+  CG+CH+DLH+   ++G+    ++ GHE +GVV EVG  V+  K GD+  V      C  C+ C    E  C  V        + G    GG ++  +    + V++P+G    A + + CAG+T Y  ++   + +PG                ++AK     KV  I  +  +   A E +GAD  + S  +D
Sbjct:   20 RSLKHGEALLKMECCGVCHTDLHVKNGDFGDKT-GVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSV-------KNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKI-RPGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATE-MGADLAINSHTED 217          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADHA_MYCTU (Probable alcohol dehydrogenase adhA OS=Mycobacterium tuberculosis GN=adhA PE=3 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.615e-15
Identity = 60/190 (31.58%), Postives = 85/190 (44.74%), Query Frame = 3
Query:  183 CGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS-----KFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADS 737
            CG+C +DLH+ + +       ++PGHE+VG V EVGS V      +F  GD+VG+  +  +C  C  C    EN CP+   T       G    GGY++       F   +P G      APLLCAGI  Y  L    L  PG                + A A G ++ V++     +  A++ LGA S
Sbjct:   48 CGVCRTDLHVTEGDLPVHRERVIPGHEVVGEVIEVGSAVGAAAGGEFDRGDRVGIAWLRHTCGVCKYCRRGSENLCPQSRYT-------GWDADGGYAEFTTVPAAFAHHLPSGYSDSELAPLLCAGIIGYRSLLRTEL-PPGGRLGLYGFGGSAHITAQVALAQGAEIHVMTRGARARKLALQ-LGAAS 228          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.109e-15
Identity = 55/218 (25.23%), Postives = 97/218 (44.50%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV 809
            +   ++ +CG+CH+DLH+   ++G+    I  GHE +G+V +VG  V+  KVGD+  V      C  C+ C    E  C        N  + G    G  ++  +    + V++P+G      + + CAG+T Y  ++   + +PG                ++AK     KV  I  +  + + A E LGAD  +  +++D  +     + G   TV
Sbjct:   26 EALLEMEYCGVCHTDLHVKNGDFGDETGRIT-GHEGIGIVKQVGEGVTSLKVGDRASVAWFFKGCGHCEYCVSGNETLC-------RNVENAGYTVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTTYKAVKVSQI-QPGQWLAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLAFAKE-LGADMVINPKNEDAAKIIQEKVGGAHATV 233          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: BDH1_YEAST ((R,R)-butanediol dehydrogenase OS=Saccharomyces cerevisiae GN=BDH1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.332e-14
Identity = 67/226 (29.65%), Postives = 102/226 (45.13%), Query Frame = 3
Query:  153 EKDVTFKVTHCGICHSDLH--------MIKN----EWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSC-------HS-------CDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR 752
            + +V   V+ CGIC SDLH        M K+    +  N   P+  GHE+ G+V++VG KV+K KVGD V V     SC       HS       CD+C    EN C     T+A     G I+ GG+++ +V  +H ++ +P+  PLD  A +    +T +  ++  G  K G                   K MG    V+S    ++ E  ++LG + F  S+
Sbjct:   26 DDEVIIDVSWCGICGSDLHEYLDGPIFMPKDGECHKLSNAALPLAMGHEMSGIVSKVGPKVTKVKVGDHVVVDA-ASSCADLHCWPHSKFYNSKPCDACQRGSENLC-----THAGFVGLGVIS-GGFAEQVVVSQHHIIPVPKEIPLDVAALVEPLSVT-WHAVKISGF-KKGSSALVLGAGPIGLCTILVLKGMGASKIVVSEIAERRIEMAKKLGVEVFNPSK 242          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH_SULAC (NAD-dependent alcohol dehydrogenase OS=Sulfolobus acidocaldarius GN=adh PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.861e-14
Identity = 65/231 (28.14%), Postives = 95/231 (41.13%), Query Frame = 3
Query:  150 GEKDVTFKVTHCGICHSDLHMIKNEWGNTI------YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ--AAMGTMDGIIDTVSA 815
            G   V  KV + G+CH+DL +      N I       P+V GHEI G V E+G  V  FK  DKV +   +G   SC  C I  + YC        N    G    GGY + ++V D  ++ ++         +PL C+G+T Y  LR   LD                   + AKA+     +      +  +    LGAD      D++E++       +D IID V +
Sbjct:   24 GVGQVLVKVDYAGVCHTDLSVRSGAIFNRISSSKPTLPLVIGHEIAGEVVELGGNVEGFKKSDKVLIDPWIGD-GSCHYCKIGEDQYCD-------NPKWLGINVNGGYGEYVLVPDYRYMFKL-RNLSTSTASPLACSGVTAYRALRLANLDPSKSVMIIGAGGGLGSIAVQIAKAIHGSFIIGVDVSEEGLKLATNLGADYVTSKVDEEEVRKITTGRGVDAIIDFVGS 245          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH_SULTO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus tokodaii GN=adh PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.671e-12
Identity = 61/209 (29.19%), Postives = 94/209 (44.98%), Query Frame = 3
Query:  162 VTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKS-EAIERLGADSFLVSRDQD 761
            V  K+   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  GD V V    G   +C  C I  E+ C        N  +DG   Y  Y  ++V    ++ ++   + ++A APL C+G+T Y  +R   LD                   + AKA+    T+I     +++ EA +R GAD  + +  QD
Sbjct:   28 VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGE-GNCYYCRIGEEHLCDSPRWLGIN--YDG--AYAEY--VLVPHYKYLYKLRRLSAVEA-APLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVS-GATIIGVDVREEALEAAKRAGADYVINASSQD 227          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.851e-12
Identity = 52/160 (32.50%), Postives = 70/160 (43.75%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK--------VIM------TYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 596
            +V  K+   GIC SD H+I     +  +P++ GHE  GVV  VG  V+KFK GDKV +   V  C  C  C     N C K        V++      T   K     I+   +++  V DE  V +I E  PL+    + C   T Y      G  KPG
Sbjct:   35 EVRVKIVATGICRSDDHVISGALSDMKFPVILGHEAAGVVESVGEGVTKFKPGDKV-IPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLLDKTSRFTCKGKSIHNFISTSTFTEYTVLDEIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGKVKPG 193          
BLAST of DY305445 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 3.723e-12
Identity = 57/207 (27.54%), Postives = 90/207 (43.48%), Query Frame = 3
Query:  159 DVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 770
            +V  KV   GIC SDLH   N   GN +   P + GHE  G +  VGS V +FKVGD+V V   V +C  C++C     N CP V      ++       G +   +   + FV  IP+    +  A +    + +++  R     +PG                  AKA G    +++     + EA +++GA   +  R+QD ++
Sbjct:   34 EVLIKVMAVGICGSDLHYYTNGRIGNYVVEKPFILGHECAGEIAAVGSSVDQFKVGDRVAVEPGV-TCGRCEACKEGRYNLCPDV------QFLATPPVDGAFVQYIKMRQDFVFLIPDSLSYEEAALIEPFSVGIHAAAR--TKLQPGSTIAIMGMGPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAAKKMGATHIINIREQDALE 231          
The following BLAST results are available for this feature:
BLAST of DY305445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ADH_STAA38.275e-2026.64Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH1_CAEEL1.321e-1726.64Alcohol dehydrogenase 1 OS=Caenorhabditis elegans ... [more]
ADHP_ECOLI4.250e-1626.92Alcohol dehydrogenase, propanol-preferring OS=Esch... [more]
ADHA_MYCTU1.615e-1531.58Probable alcohol dehydrogenase adhA OS=Mycobacteri... [more]
ADH1_ZYMMO2.109e-1525.23Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]
BDH1_YEAST2.332e-1429.65(R,R)-butanediol dehydrogenase OS=Saccharomyces ce... [more]
ADH_SULAC8.861e-1428.14NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_SULTO1.671e-1229.19NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH1_RANPE2.851e-1232.50Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
DHSO_BACSU3.723e-1227.54Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM1AA06RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305445 ID=DY305445; Name=DY305445; organism=Citrus sinensis; type=EST; length=1260bp
GAAACTAAGCCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGG
CAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAA
GGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGG
GAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATTCA
GATCTTCACATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGT
CCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGA
GTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCA
TGCCACTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAA
AGTTATAATGACCTATGCCAACAAGTACCATGATGGAACCATCACATACG
GAGGCTACTCTGACATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATT
CCTGAAGGCACACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTAT
CACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGC
ATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAAATTC
GCAAAGGCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTAGCAA
GAAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTC
GTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATTATC
GATACAGTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGTTGAA
ATCCCAAGGAAGCTTGGACTTGTTGGTGGACCAAAAGAACCCCGGAACTA
CCACCTTCTCCCTGCTCAGGGGAAGAAAAAATTTGGGGGCACCATAATTG
GGGGGAAAAAGGAAATCAAAAAAATAATGATTTTGCCGGCAAACAAAACA
TCCAAAACTGAATTGAGGGTCAAACCGGCCCAATATGGAAAACCACCCCT
GGAACCCCCTTCTAAAACCCAAGTTAAAAATTCCCTTTTTTTCATCACCC
TTTGCAAAACAACAAGAAAACCCCCCCCCCTTAAAAATTTTTTTTTCCTT
TTTTGTTTTTGCCCCTATAAAAAAGAAAAGGAAAGGGGGGGTGTTTTATT
TTTTGTCCAGGGACCCACACCCACCCTCCCCTCCAAATAATATATTTAAT
ATAATAAAAT
back to top