DY305444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_CYAP8 (Protein thf1 OS=Cyanothece sp. (strain PCC 8801) GN=thf1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.305e-25 Identity = 65/190 (34.21%), Postives = 108/190 (56.84%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEF--PSKEGEV-EGILNDIAERASGKGNFSYSRFFAVGLFRLLELANA-------TEPTVLEKLCAVLNVNKRSVDRDLDVYRN 555 TV++TK +F + RPI SIY ++EL+V+ HL+ ++YDP++ALG V + + M+GY +ED+ +IF A A+ D E+YR +AQ L +G + S L+ ++ GE EG+L + + + F YSR FA+GL+ ++ +A +LC LN++ + +DLD+YR+ Sbjct: 6 TVSDTKRDFYNHHTRPINSIYRRFIEELLVEMHLLCVNIDFRYDPIYALGVVASFQQFMQGYRPEEDKNSIFSALCQAVGGDGEKYRHEAQTLLNQVKGMSVSDLIAMGNSARTGEPGEGMLYNTLQAIAKNPQFKYSRLFAIGLYTMVMEIDADLLKEQDKRNETFSQLCNGLNLSSDKLQKDLDLYRS 195
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNP6 (Protein thf1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=thf1 PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 1.105e-24 Identity = 64/191 (33.51%), Postives = 105/191 (54.97%), Query Frame = 1 Query: 13 PTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKE---GEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELAN---ATEPTVLEKLCAVL----NVNKRSVDRDLDVYRN 555 PTV+++K F Y RPI +Y V++EL+V+ HL+ ++ YDP+FALG VT +D M Y E +F A A++++PEQYR DA + E RG + ++ ++ ++ G ++ + +G+ F YSR FA+GLF LLE A +P L+ + ++ + +DLD+YR+ Sbjct: 5 PTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGNAPELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFHLPSDKLQKDLDLYRS 195
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNE7 (Protein thf1 OS=Synechococcus elongatus (strain PCC 7942) GN=thf1 PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 1.105e-24 Identity = 64/191 (33.51%), Postives = 105/191 (54.97%), Query Frame = 1 Query: 13 PTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKE---GEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELAN---ATEPTVLEKLCAVL----NVNKRSVDRDLDVYRN 555 PTV+++K F Y RPI +Y V++EL+V+ HL+ ++ YDP+FALG VT +D M Y E +F A A++++PEQYR DA + E RG + ++ ++ ++ G ++ + +G+ F YSR FA+GLF LLE A +P L+ + ++ + +DLD+YR+ Sbjct: 5 PTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAFDSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEALGNAPELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFHLPSDKLQKDLDLYRS 195
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNP2 (Protein thf1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=thf1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 3.214e-24 Identity = 66/189 (34.92%), Postives = 110/189 (58.20%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEVEGI--LNDIAERASGKGNFSYSRFFAVGLFRLL-----ELANATE--PTVLEKLCAVLNVNKRSVDRDLDVYRN 555 TV++TK +F + RPI SI+ V++EL+V+ HL+ ++YDP +ALG VT ++R M+GY + D+ +IFQ+ A+ D +Y+ DA L E A+ + + L+E ++ EG L + E + +F YSR FA+G++ L +L TE +L + A LN+ + + +DLD+YR+ Sbjct: 6 TVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSFERFMQGYRPEADKVSIFQSMCQAIGGDANRYKEDAMALVELAKRCSGTQLIECFRQDVPPEGAQELWEKIEAIAKNDHFKYSRLFAIGVYTFLGESEPQLLEDTEKRDEMLTTVTAGLNLPEEKMKKDLDLYRS 194
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_CYAA5 (Protein thf1 OS=Cyanothece sp. (strain ATCC 51142) GN=thf1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.553e-23 Identity = 65/189 (34.39%), Postives = 104/189 (55.03%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEV--EGILNDIAERASGKGNFSYSRFFAVGLFRLL-----ELANATEP--TVLEKLCAVLNVNKRSVDRDLDVYRN 555 TV++TK F + RPI SIY ++EL+V+ HL+ ++YDP++ALG VT ++R M+GY + D+ +IF A A+ + EQY +A+ L A+G S+ EF K G+ +GIL + F YSR F VGL+ LL +L + ++++ L + + +DLD+YR+ Sbjct: 6 TVSDTKRKFYGYHTRPINSIYRRFVEELLVEMHLLSVNVDFKYDPIYALGVVTSFERFMQGYSPESDKTSIFNALCQAVDGNSEQYHQEAEALINEAKG---LSITEFKEKLGQEGGDGILWGTCGAIAQNPKFKYSRLFGVGLYTLLMEIDPDLVKEEDKRNQTIKEVSDALQFSSDKLQKDLDLYRS 191
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_GLOVI (Protein thf1 OS=Gloeobacter violaceus GN=thf1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 7.916e-23 Identity = 69/191 (36.13%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEV-EGILNDIAERASGKGN---FSYSRFFAVGLFRLLELAN----ATEPTVLEKL---CAVLNVNKRSVDRDLDVYRN 555 TV+++K F Y RP+ SIY V+ EL+V+ HL+ + +++DP+FA G +T Y LMEGY E R+AI +A TAL+ EQ DA + A A ++E + + E +G L + + +G N F YSR F++GL +LE A +E LE+L C L ++ V RDLD + + Sbjct: 6 TVSDSKRAFFAAYPRPVNSIYRRVIDELLVEVHLLITNQDFRHDPLFATGLLTAYQALMEGYTPVEQRDAILRALCTALELSYEQLHTDAAQWRAIAAELPAQEVLEVMAGKREAGDGRLKAMGDTLAGIANAERFKYSRLFSLGLANILEQAGRAAAMSEKDRLERLQQICTYLKLDYNRVKRDLDFFHS 196
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_THEEB (Protein thf1 OS=Thermosynechococcus elongatus (strain BP-1) GN=thf1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.303e-22 Identity = 68/187 (36.36%), Postives = 108/187 (57.75%), Query Frame = 1 Query: 10 PPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELANATEPTV-----LEKLCAVLNVNKRSVDRDLDVYRN 555 P TV++TK F + RPI SIY ++EL+V+ HL+R ++Y P+FALG VT +D+ MEGY + DR+ IF A A + +P+Q + DA +++ +G+ S +++ G+ LN + +GK YSR AVGL+ L+ A E T+ L++L V+ + V RDL++YR+ Sbjct: 4 PRTVSDTKRAFYAAHTRPIHSIYRRFIEELLVEIHLLRVNVDFRYSPLFALGVVTAFDQFMEGYQPEGDRDRIFHALCVAEEMNPQQLKEDAASWQQY-QGRPLSQILD-ELNSGQPSAPLNSL--NHTGK----YSRLHAVGLYAFLQ-ELAGEVTIHLNETLDQLAPVIPLPIEKVKRDLELYRS 181
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNJB (Protein thf1 OS=Synechococcus sp. GN=thf1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.950e-21 Identity = 71/190 (37.37%), Postives = 100/190 (52.63%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFPSKEGEVE--GILNDIAERASGKGNFSYSRFFAVGLFRLLELANAT---EP-----TVLEKLCAVLNVNKRSVDRDLDVYRN 555 T++ TK F Y RPI ++Y V++EL+V+ HL T+ YDP FALG VT+YD LME Y E REAIF A AL PE R +A+ L E ++ + E E G L I ER + + ++YSR AVGL+ E+ + EP LE + + L + V +DL++YR+ Sbjct: 6 TLSATKAAFFSAYPRPINAVYRRVVEELLVELHLTTVNSTFVYDPFFALGLVTLYDGLMEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMGSGDPRQRLDLLCLKPEAEDVGGLKAILERMT-QPPYAYSRVLAVGLYTAYEVVAKSLYEEPEERTRRFLENVVSKLPFSTERVRKDLELYRS 194
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNY3 (Protein thf1 OS=Synechocystis sp. (strain PCC 6803) GN=thf1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 9.677e-21 Identity = 63/188 (33.51%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLV-EFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLL-----ELANATE--PTVLEKLCAVLNVNKRSVDRDLDVYRN 555 TV++ K F Y RPI SIY ++EL+V+ HL+ + YDP+FALG VT ++ M+GY E AIF A + ++P+Q R DA+ + A + V S++ + +L + + F YSR FA+GL+ LL E+ + E L +L +L+++ V +DLD+YR+ Sbjct: 6 TVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSFNSFMQGYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNVAASAHHIGLDAWVTAAASEQASGDNLLLNTLTGIHQRHKFKYSRLFAIGLYTLLADQDPEVKDNDEKRQDYLTRLSELLDLSLDKVVKDLDLYRS 193
BLAST of DY305444 vs. ExPASy Swiss-Prot
Match: THF1_SYNJA (Protein thf1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=thf1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 3.677e-20 Identity = 73/192 (38.02%), Postives = 98/192 (51.04%), Query Frame = 1 Query: 16 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARG----QTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELANAT---EPT-----VLEKLCAVLNVNKRSVDRDLDVYRN 555 T++ TK F Y RPI + Y V++EL+V+ HL + YDP FALG VT+YD LME Y E REAIF A AL PE R +A+ L E R Q + L P E E G L I +R + + ++YSR AVGL+ E + EP LE + L + V +DL++YR+ Sbjct: 6 TLSATKAAFFSAYPRPINAAYRRVVEELLVELHLTTVNSAFVYDPFFALGLVTLYDSLMEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMRSGDPVQRYNLLCLKP--EAEDVGGLKAILQRMT-QPPYAYSRVLAVGLYTAYEAVATSLYKEPEERTRHFLEDVIGNLPFSPERVKKDLELYRS 194 The following BLAST results are available for this feature:
BLAST of DY305444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305444 ID=DY305444; Name=DY305444; organism=Citrus sinensis; type=EST; length=1249bpback to top |