DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 1.471e-76 Identity = 139/252 (55.16%), Postives = 177/252 (70.24%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKR 757 VG+ P + PF+PIS F GDN+ E S N WYKGPTLL ALD P P+DKPLRLP+QDVY I G+GTVPVGRVETG+LK G ++F P+ +T EVKS+EMHHE EALPGDNVGFNV+ +A D++RG V ++P A FT+QV+++ HP + GY PV CHTS A F+EL K+D RSG+ E+ P FLK GDA + + PT+P+V+ET + P LGRFAVRDM TVA G++ SV+ + Sbjct: 172 VGFKPAETPFIPISAFCGDNIKEASANTPWYKGPTLLAALDLFKMPDMPTDKPLRLPIQDVYTISGVGTVPVGRVETGILKKGQKISFMPANVTGEVKSIEMHHEEFPEALPGDNVGFNVRGIAKNDVRRGDVC-GPIENPPTVAEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTACMFTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 4.281e-76 Identity = 135/259 (52.12%), Postives = 189/259 (72.97%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 +GY + P +PIS +EGDN++++S + WY GPTL++ALD I EP++P+DKPLR+P+QDVY I G+GTVPVGRVETGVLK G V+ F P+ + EVKS+EMHHE++ EALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P LGRFA+RDM QTVA G++ S++K Sbjct: 170 LGY--KNFPVIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKVGDVIIFEPASTIFHKPIQGEVKSIEMHHESMPEALPGDNIGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPRDTFKAQIIVLNHPTAITIGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISIQK 426
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 4.281e-76 Identity = 133/245 (54.29%), Postives = 180/245 (73.47%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 736 VGY P V F+P+S FEGDN+ +S N WYKG TL++ALD++ P++P D PLR+P+QDVY I G+GTVPVGRVETGVLK G V F P+G++ EVKS+EMHHE +++A PGDN+GFNV+ V D++RG VA + D+P + A FT+Q++++ HPG I GY PV CHT+ +A F ELV K++ +G+ E+ P FLK G+A +VK+ PTKP+V+E D P +GRFA+RDM QTVA G+ Sbjct: 162 VGYKPSDVEFIPLSAFEGDNITSKSENTPWYKGKTLVEALDDLEAPEKPVDLPLRIPIQDVYSITGVGTVPVGRVETGVLKKGENVIFEPAGVSGEVKSIEMHHEMIEQAEPGDNIGFNVRGVGKNDIRRGDVAGH-LDNPPKVAKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLELVQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKPLVIEKIKDIPHMGRFAIRDMGQTVAAGM 405
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 9.536e-76 Identity = 133/253 (52.57%), Postives = 184/253 (72.73%), Query Frame = 2 Query: 26 PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKRD 760 P +PIS +EGDN++++S + WY GPTL++ALD I EP +P+DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ + EVKS+EMHHE +QEALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G++ S++K + Sbjct: 176 PIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 9.536e-76 Identity = 131/251 (52.19%), Postives = 187/251 (74.50%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 751 +GY +++PF+P+S + G+N+IERS N+ WY GPTL++ALD I PK+P DKPLR+P+Q+VY I G+GTVPVGRVETGVLK G V F P G+ EV+S+EMHH+ LQ+A PGDN+GFNV+ ++ KD++RG VA + D P A FT+++ ++ HP I GY PV+ HT+ IA + +E+ K+D R+G+ +EK P+FLK GDA +VK P KPMV+E +S++P LGRFA+RDM +T+ +G++ V+ Sbjct: 181 LGYKVDQIPFIPVSAWTGENLIERSPNMPWYNGPTLVEALDTYIQPPKKPVDKPLRIPIQNVYSIPGVGTVPVGRVETGVLKVGDKVVFMPPGVVGEVRSIEMHHQPLQQAEPGDNIGFNVRGISKKDIRRGDVAGH-VDKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVK 430
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.245e-75 Identity = 132/249 (53.01%), Postives = 180/249 (72.29%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 VGY P+ + F+P+S F GDN+ ++S N WYKGPT+LDAL+ ++EP++P++ P+RLP+QDVY I GIGTVPVGRVETG++K GM V+F P+ E+KS+EMHHE + +ALPGDNVGFNV+ + D++RG V S D P A F +QV++++HP + GY PV CHT+ IA F EL+ K+D R+G+ E+ P FLK GDA +VK+ PT+PMV+E + P LGRFAVRDM T+A GV + Sbjct: 172 VGYKPDDISFIPMSAFVGDNIAKKSENTPWYKGPTVLDALNALSEPEKPTNLPMRLPIQDVYSISGIGTVPVGRVETGIMKKGMKVSFMPANKEGEIKSIEMHHEEIPQALPGDNVGFNVRGIGKGDIRRGDVCGPS-DVPPTVAEEFIAQVVVLHHPSALTVGYTPVFHCHTAQIACSFVELMKKLDPRTGQVKEENPTFLKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDI 419
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.245e-75 Identity = 133/250 (53.20%), Postives = 181/250 (72.40%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 751 +GY K+PF+PIS + G+N+IERS N+ WY GPTL++ALD + P +P +KPLR+P+QDVY I GIG VPVGRVETGVLK G + F P+GL EVK++E HH +++A PGDN+GFNVK V KD+KRG VA S D P A FT+++++M HP I GY PV+ HT+ +A + +E++ KID R+GKE+EK P FLK GD +VK P KP+VVE +SD+ LGRFA+RDM +T+ +G + ++ Sbjct: 182 LGYDVSKIPFIPISAWTGENLIERSPNMPWYNGPTLVEALDTLEVPPKPINKPLRIPIQDVYNISGIGVVPVGRVETGVLKVGDKLVFMPAGLVAEVKTIETHHTKIEKAEPGDNIGFNVKGVEKKDIKRGDVA-GSLDVPPTVADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIK 430
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 2.124e-75 Identity = 134/261 (51.34%), Postives = 188/261 (72.03%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKRD 760 +GY + P +PIS +EGDN++++S + WY GPTL++ALD + EP +P+DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ + EVKS+EMHHE +QEALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G++ S++K + Sbjct: 170 LGY--KNFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQMPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 2.124e-75 Identity = 130/252 (51.59%), Postives = 183/252 (72.62%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKR 757 VGY +++PF+P+S + GDN+ ++S WY GPTLL+A D + P++ DKPLR+P+QDVY I G+GTVPVGRVE+GVL+ G V F P+G++ EVKS+EMHHE +QEA PGDN+GFNV+ V+ KD++RG VA + D+P +FT+Q++++ HP I GY PV+ HT+ IA +F EL KID R+G+ E+ P+FLK GDA +VK+ PT+PMV+E D PP+GRFA+RDM T+ G++ + R Sbjct: 172 VGYKVDEIPFIPVSAYYGDNVAKKSDKTPWYNGPTLLEAFDLLKPPEKLVDKPLRIPIQDVYSISGVGTVPVGRVESGVLRVGDKVVFEPAGVSGEVKSIEMHHEPIQEAYPGDNIGFNVRGVSKKDIRRGDVAGH-PDNPPTVVKDFTAQLVVLQHPTAITVGYTPVVHAHTAQIACRFVELQKKIDPRTGQVKEENPQFLKTGDAAIVKLEPTRPMVIERVKDIPPMGRFAIRDMGMTIGAGMVLDLTPR 422
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 3.624e-75 Identity = 132/252 (52.38%), Postives = 178/252 (70.63%), Query Frame = 2 Query: 2 VGYYPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKR 757 VG P+ V F+PIS FEGDN+ + S + WYKG TL LD + P +P++KPLR+P+QD Y I GIGTVPVGRVETG+LK GM VTF P+ + EVKS+EMHHE + +A+PGDN+GFNV+ + D++RG V S D+P A FT+Q++++ HP I GY PV CHT+ A F+ELV K+D R+G+ LE+ P FLK GDA ++K PTKP+ +E ++P LGRFA+RDM QT+A G+ +V K+ Sbjct: 172 VGTNPDTVKFIPISAFEGDNITKNSDKMPWYKGKTLFGLLDELEVPDKPTEKPLRVPIQDAYSISGIGTVPVGRVETGILKKGMNVTFMPANKSGEVKSIEMHHEEIPQAVPGDNIGFNVRGIGKDDVRRGDVCGAS-DNPPAVAEEFTAQIVVLQHPSAITVGYTPVFHCHTAQTACTFTELVKKLDPRTGQTLEENPTFLKAGDAAIIKCHPTKPLCLENAKEFPQLGRFAIRDMGQTIAAGMCINVVKK 422 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |