DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 61/210 (29.05%), Postives = 96/210 (45.71%), Query Frame = 2 Query: 128 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 I P+RP+DK +P++DV+ I G GTV GRVETG LK G +V V VEM + L AL GDN+G ++ V +D++RG V +K F QV ++ + G + P + + + +++ I G E+ + M + TK + + RFA+R+ +TV GV+ S+ Sbjct: 202 IPTPERPTDKAFLMPIEDVFTITGRGTVATGRVETGTLKVGDEVEIVGMKDEITKVVVTGVEMFRKILDSALAGDNIGALLRGVQREDIERGQVL--AKPGSITPHNKFVGQVYVLKK--EEGGRHTPFFNGYRPQFYFRTTDVTGSIQLPDGVEM-----VMPGDHIDMTVELITKVAMGDNL-------RFAIREGGRTVGSGVVTSI 395
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BRELN (Elongation factor Tu OS=Brevibacterium linens GN=tuf PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 70/252 (27.78%), Postives = 111/252 (44.05%), Query Frame = 2 Query: 17 EKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDAL--DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 + P +P+S EGD W K L A DN+ EP+R DKP +P++DV+ I G GTV GRVE GVL P +V T V ++EM + L +A G+NVG ++ +D++RG V K F +QV I++ G + P + + +++ I G E+ + GD + + +P+ +E RFA+R+ +TV G + + Sbjct: 168 DNAPVIPVSALKALEGDEK--------WVKSVQDLMAAVDDNVPEPERDVDKPFLMPVEDVFTITGRGTVVTGRVERGVLLPNDEIEIVGIKEKSSKTTVTAIEMFRKTLPDARAGENVGLLLRGTKREDVERGQVI--VKPGSITPHTKFEAQVYILSK--DEGGRHNPFYSNYRPQFYFRTTDVTGVITLPEGTEM------VMPGDNTDMSVELIQPIAMEDRL------RFAIREGGRTVGAGRVTKI 395
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_ACHLI (Elongation factor Tu OS=Acholeplasma laidlawii (strain PG-8A) GN=tuf PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 63/217 (29.03%), Postives = 109/217 (50.23%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MVVTFGPSGL-TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L+DA+D I+ P R +DKP +P++DV+ I G GTV GRV+ G++K G V G + TT V VEM + L +A GDN+G ++ V + ++RG V SK + A FT+Q+ +++ + G + + + +++ I G E+ + GD V + P+ +E + +F++R+ +TVA G + + Sbjct: 192 LMDAVDAYIDTPLRATDKPFMMPVEDVFTITGRGTVATGRVDRGIVKVGDQVEIVGITDTKTTTVTGVEMFRKLLDQAEAGDNIGALLRGVDREGVERGQVL--SKPGTVKPHAKFTAQIYVLSK--EEGGRHTAFFSNYRPQFYFRTTDITGIITLGEGTEM------VMPGDNAEVTVELIHPIALEEGT------KFSIREGGRTVASGSVVKI 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU2_YERPS (Elongation factor Tu 2 OS=Yersinia pseudotuberculosis GN=tuf2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 128 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + +D++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD + MI T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVL--AKPGSIKPHTTFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NINMIVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU2_YERPN (Elongation factor Tu 2 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tuf2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 128 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + +D++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD + MI T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVL--AKPGSIKPHTTFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NINMIVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU2_YERP3 (Elongation factor Tu 2 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=tuf2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 128 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + +D++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD + MI T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVL--AKPGSIKPHTTFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NINMIVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU2_PHOLL (Elongation factor Tu 2 OS=Photorhabdus luminescens subsp. laumondii GN=tuf2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 65/217 (29.95%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF-GPSGLT-TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L +ALD+ I EP+R D+P LP++DV+ I G GTV GRVE G++K G V G T T VEM + L E G+NVG ++ +++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +K+ P+ ++ RFA+R+ +TV GV+ V Sbjct: 192 LAEALDSYIPEPERAIDQPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVL--AKPGSIKPHTTFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIQMKVTLIAPIAMDQGL------RFAIREGGRTVGAGVVAKV 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPP (Elongation factor Tu 1 OS=Yersinia pestis (strain Pestoides F) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 128 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + +D++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD + MI T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVL--AKPGSIKPHTTFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NINMIVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPE (Elongation factor Tu-A OS=Yersinia pestis GN=tufA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 128 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + +D++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD + MI T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVL--AKPGSIKPHTTFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NINMIVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPA (Elongation factor Tu 1 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 128 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + +D++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD + MI T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVL--AKPGSIKPHTTFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NINMIVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |