DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_PHOLL (Elongation factor Tu 1 OS=Photorhabdus luminescens subsp. laumondii GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.947e-14 Identity = 65/217 (29.95%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF-GPSGLT-TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L +ALD+ I EP+R D+P LP++DV+ I G GTV GRVE G++K G V G T T VEM + L E G+NVG ++ +++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +K+ P+ ++ RFA+R+ +TV GV+ V Sbjct: 192 LAEALDSYIPEPERAIDQPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVL--AKPGSIKPHTTFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIQMKVTLIAPIAMDQGL------RFAIREGGRTVGAGVVAKV 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_RICAH (Elongation factor Tu OS=Rickettsia akari (strain Hartford) GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 61/217 (28.11%), Postives = 108/217 (49.77%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L+DA+DN I P R +DKP +P++DV+ I G GTV GRVE+G++K G V T T VEM + L E GDNVG ++ ++++RG V +K + F ++V +++ + G + P + + + +++ I + K++ N V++I KP+ ++ S +F++R+ +TV GV+ + Sbjct: 192 LMDAVDNYIPHPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEVEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDQFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPG---DNATTFTVELI--KPIAMQQGS------KFSIREGGKTVGAGVVTKI 393
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_RALEH (Elongation factor Tu OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 64/218 (29.36%), Postives = 104/218 (47.71%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L DALD I P+R D +P++DV+ I G GTV GR+E GV+K G +V P+ TT VEM + L + GDNVG ++ +D++RG V K + +FT +V I++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 194 LADALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRIERGVVKVGEEIEIVGIKPTVKTT-CTGVEMFRKLLDQGQAGDNVGLLLRGTKREDVERGQVL--CKPGSIKPHTHFTGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_OCHA4 (Elongation factor Tu OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 60/218 (27.52%), Postives = 103/218 (47.25%), Query Frame = 2 Query: 104 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 +L+ A+D+ I P+RP D+P +P++DV+ I G GTV GRVE G++K G V T T V VEM + L + GDN+G ++ V +D++RG V K + F ++ I+ G + P + + +++ + G E+ + GD + + P+ +E RFA+R+ +TV G++ S+ Sbjct: 188 SLMAAVDDYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKATAKTTVTGVEMFRKLLDQGQAGDNIGALIRGVGREDVERGQVL--CKPGSVKPHTKFKAEAYILTK--DEGGRHTPFFTNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNVAMDVTLIVPIAMEEKL------RFAIREGGRTVGAGIVSSI 389
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_LACRJ (Elongation factor Tu OS=Lactobacillus reuteri (strain JCM 1112) GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 59/218 (27.06%), Postives = 102/218 (46.79%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L+D +D+ I PKRP+DKP +P++DV+ I G GTV GR++ G +K G +V L + V +EM H+ L GDNVG ++ ++ ++RG V ++ + NF +V +M + G + P + +++ I+ G E+ + GD + KP+ +E +F +R+ TV GV+ + Sbjct: 193 LMDVIDDYIPTPKRPTDKPFMMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLTEDVLKSTVTGLEMFHKTLDLGEAGDNVGVLLRGISHDQIQRGQVL--AEPGSIQTHKNFKGEVYVMTK--EEGGRHTPFFSNYRPQFYFHTTDVTGTIELPDGVEM------VMPGDNVTFTVNLQKPVALEKGL------KFTIREGGHTVGAGVVSDI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_LACRD (Elongation factor Tu OS=Lactobacillus reuteri (strain DSM 20016) GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 59/218 (27.06%), Postives = 102/218 (46.79%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L+D +D+ I PKRP+DKP +P++DV+ I G GTV GR++ G +K G +V L + V +EM H+ L GDNVG ++ ++ ++RG V ++ + NF +V +M + G + P + +++ I+ G E+ + GD + KP+ +E +F +R+ TV GV+ + Sbjct: 193 LMDVIDDYIPTPKRPTDKPFMMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLTEDVLKSTVTGLEMFHKTLDLGEAGDNVGVLLRGISHDQIQRGQVL--AEPGSIQTHKNFKGEVYVMTK--EEGGRHTPFFSNYRPQFYFHTTDVTGTIELPDGVEM------VMPGDNVTFTVNLQKPVALEKGL------KFTIREGGHTVGAGVVSDI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_HAEDU (Elongation factor Tu OS=Haemophilus ducreyi GN=tufA PE=3 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 65/235 (27.66%), Postives = 110/235 (46.81%), Query Frame = 2 Query: 56 DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 + +IE + +LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ V VEM + L E G+NVG ++ ++++RG V +K +F S+V +++ + G + P + + +++ I+ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + K Sbjct: 187 EKIIELAQHLDSY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKSGEEVEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL--AKPGTITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMTVSLIHPIAMDEGL------RFAIREGGRTVGAGVVAKIIK 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_DEIGD (Elongation factor Tu OS=Deinococcus geothermalis (strain DSM 11300) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 66/219 (30.14%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 LLDA+D I P+R +DK +P++DV+ I G GTV GRVE GV K G V GL T + VEMH + L + + GDNVG ++ VA D++RG V +K F + V +++ G ++ + + +++ ++ +G E+ + GD + KP+ +E RFA+R+ +TV GV+ V Sbjct: 203 LLDAIDAYIPTPERATDKTFLMPVEDVFTITGRGTVATGRVERGVCKVGDEVEI--VGLRDTKKTTITGVEMHRKLLDQGMAGDNVGVLLRGVARDDVERGQVL--AKPGSITPHTKFEASVYVLSK--DEGGRHSAFFGGYRPQFYFRTTDVTGVVELPAGVEM------VMPGDNVSFTVELIKPIAMEEGL------RFAIREGGRTVGAGVVTKV 403
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BURS3 (Elongation factor Tu OS=Burkholderia sp. (strain 383) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 63/219 (28.77%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 104 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 +L DALD I P+R D +P++DV+ I G GTV GRVE G++K G +V P+ TT VEM + L + GDNVG ++ +D++RG V +K +FT++V +++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 193 SLADALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIKPTVKTT-CTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--AKPGSITPHTHFTAEVYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BURCM (Elongation factor Tu OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 63/219 (28.77%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 104 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 +L DALD I P+R D +P++DV+ I G GTV GRVE G++K G +V P+ TT VEM + L + GDNVG ++ +D++RG V +K +FT++V +++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 193 SLADALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIKPTVKTT-CTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--AKPGSITPHTHFTAEVYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |