DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BURCH (Elongation factor Tu OS=Burkholderia cenocepacia (strain HI2424) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 63/219 (28.77%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 104 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 +L DALD I P+R D +P++DV+ I G GTV GRVE G++K G +V P+ TT VEM + L + GDNVG ++ +D++RG V +K +FT++V +++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 193 SLADALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIKPTVKTT-CTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--AKPGSITPHTHFTAEVYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BURCE (Elongation factor Tu OS=Burkholderia cepacia GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 63/219 (28.77%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 104 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 +L DALD I P+R D +P++DV+ I G GTV GRVE G++K G +V P+ TT VEM + L + GDNVG ++ +D++RG V +K +FT++V +++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 193 SLADALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIKPTVKTT-CTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--AKPGSITPHTHFTAEVYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BURCA (Elongation factor Tu OS=Burkholderia cenocepacia (strain AU 1054) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 63/219 (28.77%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 104 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 +L DALD I P+R D +P++DV+ I G GTV GRVE G++K G +V P+ TT VEM + L + GDNVG ++ +D++RG V +K +FT++V +++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 193 SLADALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIKPTVKTT-CTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--AKPGSITPHTHFTAEVYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BRASO (Elongation factor Tu OS=Bradyrhizobium sp. (strain ORS278) GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 61/221 (27.60%), Postives = 107/221 (48.42%), Query Frame = 2 Query: 107 LLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 +L+ + N++E P+RP D+P +P++DV+ I G GTV GRVE GV+K G +V P+ TT V VEM + L + GDN+G ++ +D++RG V K + F ++ I+ + G + P + + +++ + G E+ + GD +++ P+ +E RFA+R+ +TV GV+ S+ Sbjct: 191 ILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGRVERGVIKVGEEIEIVGIRPTQKTT-VTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVL--CKPGSVKPHTKFKAEAYILTK--EEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEM------VMPGDNIAMEVHLIVPIAMEEKL------RFAIREGGRTVGAGVVASI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BRASB (Elongation factor Tu OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 61/221 (27.60%), Postives = 107/221 (48.42%), Query Frame = 2 Query: 107 LLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 +L+ + N++E P+RP D+P +P++DV+ I G GTV GRVE GV+K G +V P+ TT V VEM + L + GDN+G ++ +D++RG V K + F ++ I+ + G + P + + +++ + G E+ + GD +++ P+ +E RFA+R+ +TV GV+ S+ Sbjct: 191 ILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGRVERGVIKVGEEIEIVGIRPTQKTT-VTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVL--CKPGSVKPHTKFKAEAYILTK--EEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEM------VMPGDNIAMEVHLIVPIAMEEKL------RFAIREGGRTVGAGVVASI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU2_CARHZ (Elongation factor Tu 2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 60/223 (26.91%), Postives = 109/223 (48.88%), Query Frame = 2 Query: 107 LLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 +L+ +D ++E P+R DKP +P++DV+ I G GTV GRVE G + G +V + T V +EM + L EA+ GDN+G ++ V K+++RG V +K + F ++V ++ + G + P + + + +++ I G E+ + GD + + P+ +E RFA+R+ +TV GV+ ++E+ Sbjct: 194 ILELMDKVDEYIPTPQRDVDKPFLMPVEDVFTITGRGTVATGRVERGRITIGEEVEIVGLMDAPRKTVVTGLEMFRKVLDEAVAGDNIGALLRGVDRKEIERGQVL--AKPGTIKPHRKFFAEVYVLTK--EEGGRHTPFFNGYRPQFYFRTTDVTGVIHLPEGVEM------VMPGDNVKIHIELITPIAIEEGL------RFAIREGGRTVGAGVVTAIEE 400
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_STRAW (Elongation factor Tu 1 OS=Streptomyces avermitilis GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 67/256 (26.17%), Postives = 116/256 (45.31%), Query Frame = 2 Query: 17 EKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 + +P V +S EGD +W G ++LD + +NI +P+R DKP +P++DV+ I G GTV GR+E GVLK +V TT V +EM + L E G+NVG ++ + +D++RG V K F +Q I++ G + P + + + +++ + G E+ + GD + + +P+ +E +FA+R+ +TV G + + K Sbjct: 168 DDLPVVKVSALKALEGDK--------EW--GQSVLDLMKAVDENIPQPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIVGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQVI--IKPGSVTPHTEFEAQAYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTEMTVELIQPVAMEEGL------KFAIREGGRTVGAGQVTKINK 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_CARHZ (Elongation factor Tu 1 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 60/223 (26.91%), Postives = 109/223 (48.88%), Query Frame = 2 Query: 107 LLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 +L+ +D ++E P+R DKP +P++DV+ I G GTV GRVE G + G +V + T V +EM + L EA+ GDN+G ++ V K+++RG V +K + F ++V ++ + G + P + + + +++ I G E+ + GD + + P+ +E RFA+R+ +TV GV+ ++E+ Sbjct: 194 ILELMDKVDEYIPTPQRDVDKPFLMPVEDVFTITGRGTVATGRVERGRITIGEEVEIVGLMDAPRKTVVTGLEMFRKVLDEAVAGDNIGALLRGVDRKEIERGQVL--AKPGTIKPHRKFFAEVYVLTK--EEGGRHTPFFNGYRPQFYFRTTDVTGVIHLPEGVEM------VMPGDNVKIHIELITPIAIEEGL------RFAIREGGRTVGAGVVTAIEE 400
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: CYSN_SODGM (Sulfate adenylyltransferase subunit 1 OS=Sodalis glossinidius (strain morsitans) GN=cysN PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.038e-13 Identity = 64/238 (26.89%), Postives = 104/238 (43.70%), Query Frame = 2 Query: 23 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-NHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG 733 + FVP+S EGDN+ + WY GPTLLD L+ + +P R P+Q V + G V GVL+ G V PSG+T+ + + L EA G+ V +K+ D+ RG + ++ + E N V+ M P G + + + V + I+ + + + P NG G+V++ +PM+++ ++D P G D V VG Sbjct: 200 ITFVPLSALEGDNVAALGKAMPWYNGPTLLDVLETVEVINLNEQQPARFPVQYVNRPNLDFRGYAGTVAAGVLRVGQAVKVLPSGVTSTISRIVTFDGDLTEAWAGEAVTLVLKDEV--DISRGDLLVDA-GETLTEVQNAQVDVVWMTEQPLVAGQSFDIKIAGKKTRARVDNIQYQVDINTLTQRVADSLP---LNG-IGLVELAFDEPMILDKYADNPTTGGMIFIDRLSNVTVG 430
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_XYLFT (Elongation factor Tu OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=tufA PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 61/218 (27.98%), Postives = 106/218 (48.62%), Query Frame = 2 Query: 107 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L +ALD +I P+R D+P +P++DV+ I G GTV GR+E GV+K G +V P+ T V VEM + L + GDN G ++ +++RG V +K + F ++V +++ + G + P + +T ++ +++ K+ G E+ + GD V + P+ + RFA+R+ +TV GV+ V Sbjct: 194 LAEALDTHIPNPERAIDRPFLMPVEDVFSISGRGTVVTGRIECGVIKVGDEVEIVGIRPTSKTI-VTGVEMFRKLLDQGQAGDNAGLLLRGTKRDEVERGQVL--AKPGCIKAHKEFEAEVYVLSK--EEGGRHTPFFNGYTPQFYMRTTDITGKVCLPEGVEM------VMPGDNVKVTVSLINPVAMGEGQ------RFAIREGGRTVGAGVVSKV 394 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |