DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_SORC5 (Elongation factor Tu OS=Sorangium cellulosum (strain So ce56) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 68/247 (27.53%), Postives = 116/247 (46.96%), Query Frame = 2 Query: 47 FEGDNM-IERSTNLDWYKGPT--------LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 F+GDN + R +L +G LL ALD+ I EP R DKP + ++DV+ I G GTV GR+E GV+K G ++ F + + V VEM + L + GDNVG ++ V ++++RG V +K FT +V ++ + G + P + ++ +++ ++ L + K + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 165 FDGDNAPVVRGASLPALQGDPKWEETIQQLLSALDSYIPEPVRDIDKPFLMAIEDVFSIKGRGTVATGRIERGVIKVGDEVQIIGFKDTKKSV-VTGVEMFRKLLDQGQAGDNVGCLLRGVEKEEIERGQVL--AKPGSITPHTKFTGEVYVLKK--EEGGRHTPFFTNYRPQFYIRTTDVTGTVN------LPEGVKMVMPGDNITMTIELIAPVALEEQM------RFAIREGGKTVGAGVVTKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_PROMA (Elongation factor Tu OS=Prochlorococcus marinus GN=tuf PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 70/256 (27.34%), Postives = 118/256 (46.09%), Query Frame = 2 Query: 17 EKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEL---VTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 +++P V +SG EGD+ E K L+ A+D +I EP+R DKP + ++DV+ I G GTV GR+E G + G +V + LTT V VEM + L E + GDNVG ++ + +D++RG V K F +V ++ + G + P + ++ +++ +T G +E + GD + P+ +E RFA+R+ +T+ GV+ + K Sbjct: 166 DEIPIVQVSGLKALEGDSEWEG-------KVEELMKAVDASIPEPEREVDKPFLMAVEDVFSITGRGTVATGRIERGKVTVGEEVEIVGIRDTRLTT-VTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVL--VKKGSITPHTQFEGEVYVLKK--EEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSSVE----MVMPGDRIKMTGELICPVAIEQGM------RFAIREGGRTIGAGVVSKIIK 399
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 68/252 (26.98%), Postives = 115/252 (45.63%), Query Frame = 2 Query: 17 EKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEL---VTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 + +P V +SG + + E +D L+DA+D +I EP+R +KP + ++DV+ I G GTV GR+E G +K G +V S TT V VEM + L E L GDN G ++ + +D++RG V K F QV ++ + G + P + ++ +++ +T G +E + GD + P+ +E RFA+R+ +T+ GV+ + Sbjct: 166 DDIPIVQVSGLKAIEGEAEWEAKID-----ELMDAVDTSIPEPEREIEKPFLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTT-VTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVL--VKPGSITPHTKFEGQVYVLKK--EEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVE----MVMPGDNIKMTGELICPVAIEQGM------RFAIREGGRTIGAGVVSKI 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_ODOSI (Elongation factor Tu, chloroplastic OS=Odontella sinensis GN=tufA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 65/245 (26.53%), Postives = 108/245 (44.08%), Query Frame = 2 Query: 38 ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG--LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLG-----RFAVRDMRQTVAVGVIKSV 748 I + I+R N K L+DA+D I P+R +K + ++DV+ I G GTV GR+E GV+K G V G TT + +EM + L E GDNVG ++ V +D++ G V S+ NF S+V ++ G + P + V+ +++ I + + D +V+M+ + T P+ RFA+R+ +T+ GV+ + Sbjct: 179 IEAISSNPAIKRGDNPWVDKIFALMDAVDEYIPTPERDIEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGDTVEIVGVGDTQTTTITGIEMFQKTLDEGFAGDNVGILLRGVTREDIEAGMVL--SEPGTITPHTNFESEVYVLTK--DEGGRHTPFFTGYRPQFYVRTTDVTGAITQFTA------------DDGSIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKI 407
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_NOVAD (Elongation factor Tu OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=tuf PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 60/221 (27.15%), Postives = 108/221 (48.87%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 L+ A+D I +P RP+DKP +P++DV+ I G GTV GR+ETG++K G V GL T V VEM + L + GDN+G ++ + ++++RG V +K F+++V +++ G + P + + +++ ++ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + K Sbjct: 194 LMAAVDAYIPQPPRPTDKPFLMPVEDVFSISGRGTVVTGRIETGIIKVGEEVEI--IGLKDTQKTTVTGVEMFRKLLDQGEAGDNIGALIRGIKREEVERGQVL--AKPGSVTPHTEFSAEVYVLSK--DEGGRHTPFFANYRPQFYFRTTDVTGEVVLPEGTEM------VMPGDNVTLAVKLIAPIAMDEGL------RFAIREGGRTVGSGVVSKITK 396
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_NITHX (Elongation factor Tu OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=tuf PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 61/218 (27.98%), Postives = 107/218 (49.08%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L+ A+D I +P+RP D+P +P++DV+ I G GTV GRVE G++K G +V P+ TT V VEM + L + GDN+G ++ +D++RG V K + F ++ I+ + G + P + + +++ + +G E+ + GD +++ P+ +E RFA+R+ +TV GV+ S+ Sbjct: 194 LMKAVDAYIPQPERPVDQPFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIRPTQKTT-VTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVL--CKPGSVKPHTKFKAEAYILTK--EEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPAGTEM------VMPGDNVAMEVHLIVPIAMEEKL------RFAIREGGRTVGAGVVASI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 68/255 (26.67%), Postives = 115/255 (45.10%), Query Frame = 2 Query: 11 YPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 + E+ P V +S EGD +S L++A+D +I +P R +DKP +P++DV+ I G GTV GRVE GV+ +V P T V VEM + L + GDNVG ++ + +D++RG V K F QV I++ G + P + + + +++ + G E+ + GD + + +P+ ++ RFA+R+ +TV G + + K Sbjct: 165 FDEEAPVVRVSALKALEGDPKWVKSVE-------ELMEAVDASIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPETTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVV--VKPGTTTPHTEFEGQVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTDISVKLIQPVAMDEGL------RFAIREGGRTVGAGRVTKIIK 396
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_HUMAN (Elongation factor Tu, mitochondrial OS=Homo sapiens GN=TUFM PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 74/254 (29.13%), Postives = 117/254 (46.06%), Query Frame = 2 Query: 5 GYYPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFS---ELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 739 GY E+ P + + EG R L LLDA+D I P R +KP LP++ VY + G GTV G +E G+LK G + + T V +EM H++L+ A GDN+G V+ + +DL+RG V K + +QV I++ + G + P + + + V FS ++ +I KEL + LK +I +PM++E RF +RD +T+ G++ Sbjct: 207 GYKGEETPVIVGSALCALEG-----RDPELGLKSVQKLLDAVDTYIPVPARDLEKPFLLPVEAVYSVPGRGTVVTGTLERGILKKGDECELLGHSKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVM--VKPGSIKPHQKVEAQVYILSK--EEGGRHKPFV---SHFMPVMFSLTWDMACRIILPPEKELAMPGEDLK------FNLILRQPMILEKGQ------RFTLRDGNRTIGTGLV 436
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_CHRVO (Elongation factor Tu OS=Chromobacterium violaceum GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 65/219 (29.68%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L DALD+ I P+R DKP LP++DV+ I G GTV GRVE G++K G + GL VK+ VEM + L + GDNVG ++ +D++RG V +K F + V +++ G + P + + +++ I G E+ + GD +K+ P+ +E RFA+R+ +TV GV+ + Sbjct: 194 LADALDSYIPTPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEELEI--VGLKDTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVL--AKPGTITPHTKFEASVYVLSK--DEGGRHTPFFANYRPQFYFRTTDVTGAISLAEGVEM------VMPGDNVEIKVELIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_BURVG (Elongation factor Tu OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 63/218 (28.90%), Postives = 105/218 (48.17%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L DALD I P+R D +P++DV+ I G GTV GRVE G++K G +V P+ TT VEM + L + GDNVG ++ +D++RG V +K +FT++V +++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 194 LADALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIKPTVKTT-CTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--AKPGSITPHTHFTAEVYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |