DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBT (Elongation factor Tu OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=tuf1 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 61/217 (28.11%), Postives = 106/217 (48.85%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L+ ALD+ I EP+R DK +P++DV+ I G GTV GRVE G++K G V + T V VEM + L E G+N G ++ ++++RG V +K + F ++V +++ + G + P L+ + + +++ I + G E+ + GD + + P+ ++ P RFA+R+ +TV GV+ V Sbjct: 194 LVAALDSYIPEPERAIDKAFLMPIEDVFSISGRGTVVTGRVEAGIIKVGEEVEIVGIKDTVKTTVTGVEMFRKLLDEGRAGENCGILLRGTKREEVQRGQVL--AKPGTIKPHTKFDAEVYVLSK--EEGGRHTPFLNGYRPQFYFRTTDVTGAIQLKEGVEM------VMPGDNVEMSVELIHPIAMD------PGLRFAIREGGRTVGAGVVAKV 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_ACIB3 (Elongation factor Tu OS=Acinetobacter baumannii (strain AB307-0294) GN=tuf PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 61/217 (28.11%), Postives = 106/217 (48.85%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L+ ALD+ I EP+R DK +P++DV+ I G GTV GRVE G++K G V + T V VEM + L E G+N G ++ ++++RG V +K + F ++V +++ + G + P L+ + + +++ I + G E+ + GD + + P+ ++ P RFA+R+ +TV GV+ V Sbjct: 194 LVAALDSYIPEPERAIDKAFLMPIEDVFSISGRGTVVTGRVEAGIIKVGEEVEIVGIKDTVKTTVTGVEMFRKLLDEGRAGENCGILLRGTKREEVQRGQVL--AKPGTIKPHTKFDAEVYVLSK--EEGGRHTPFLNGYRPQFYFRTTDVTGAIQLKEGVEM------VMPGDNVEMSVELIHPIAMD------PGLRFAIREGGRTVGAGVVAKV 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU3_STRRA (Elongation factor Tu-3 OS=Streptomyces ramocissimus GN=tuf3 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 71/254 (27.95%), Postives = 115/254 (45.28%), Query Frame = 2 Query: 5 GYYPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYP--PLGRFAVRDMRQTVAVGVIKSV 748 GY + P V +SG EGD S LLDA+D + P+R D P LP+++V I G GTV G VE G ++ G V +GL T V +E + + EA GDNV ++ V ++RG V + R + F++QV +++ + G PV + ++ +++V +D G+ G+ + T M+VE + P P FA+R+ +TV G + ++ Sbjct: 161 GYGGDGAPVVRVSGLKALEGDPKWTASIE-------ALLDAVDTYVPMPERYVDAPFLLPVENVLTITGRGTVVTGAVERGTVRVGNRVEVLGAGLETVVTGLETFGKPMDEAQAGDNVALLLRGVPRDAVRRGHVVAAPGSVVPR--SRFSAQVYVLS--AREGGRTTPVTSGYRPQFYIRTADVVGDVDL---------------GEVGVARPGETVSMIVELGREVPLEPGLGFAIREGGRTVGAGTVTAL 388
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU3_STRCO (Elongation factor Tu-3 OS=Streptomyces coelicolor GN=tuf3 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 79/257 (30.74%), Postives = 120/257 (46.69%), Query Frame = 2 Query: 5 GYYPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG-FVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYP---PLGRFAVRDMRQTVAVGVIKSVE 751 GY + VP V +SG EGD S LLDA+D + P+R D P LP+++V I G GTV G VE G ++ G V + + T V +E + ++EA GDNV ++ VA ++RG VA+ PAR F ++V +++ + G P+ + ++ +++V +D G+E P GD T M VE D P LG FA+R+ +TV G + +VE Sbjct: 164 GYGGDAVPVVRVSGLKALEGDPRWTASVE-------ALLDAVDTYVPMPERYLDAPFLLPVENVLTITGRGTVVTGAVERGTVRVGDRVEVLGASVETVVTGLETFGKPMEEAQAGDNVALLLRGVARDTVRRGQVVAAPGSVVPAR---RFRARVYVLS--AREGGRSTPLTTGYRPQFYIRTADVVGDVD--LGEEAVARP-----GD--------TVTMTVELGRDVPLETGLG-FAIREGGRTVGAGTVTAVE 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU2_ALKMQ (Elongation factor Tu 2 OS=Alkaliphilus metalliredigens (strain QYMF) GN=tuf2 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 60/218 (27.52%), Postives = 103/218 (47.25%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L DA+D I EP R +DKP +P++DV+ I G GTV GR+E G++K +V + V VEM + L + GDNVG ++ + +++RG V +K + F ++V ++ + G + P D + + +++ I G E+ + GD +++ P+ E RFA+R+ +TV GV+ S+ Sbjct: 194 LFDAIDTWIPEPVRDTDKPFLMPVEDVFSITGRGTVATGRIERGIVKVQEEISLVGLSEAPRKLVVTGVEMFRKLLDQGQAGDNVGILLRGIQRDEIERGQVL--AKTGSIQPHTKFMAEVYVLKK--EEGGRHTPFFDGYRPQFYFRTTDVTGSIKLPEGVEM------VMPGDNITMEIELISPIATEEGL------RFAIREGGRTVGAGVVASI 395
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCO (Elongation factor Tu-1 OS=Streptomyces coelicolor GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 60/220 (27.27%), Postives = 103/220 (46.82%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 L+ A+D I EP+R DKP +P++DV+ I G GTV GR+E GVLK ++ TT V +EM + L E G+NVG ++ + +D++RG V K F +Q I++ G + P + + + +++ + G E+ + GD +K+ +P+ +E +FA+R+ +TV G + + K Sbjct: 194 LMKAVDEAIPEPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIIGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQVI--IKPGSVTPHTEFEAQAYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTEMKVELIQPVAMEEGL------KFAIREGGRTVGAGQVTKINK 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESR (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-7) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 62/217 (28.57%), Postives = 103/217 (47.47%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L +ALD+ I EP+R DKP +P++DV+ I G GTV GRVE G+++ G V TT+ VEM + L E G+N G ++ D++RG V SK F S+V +++ + G + P + + +++ I+ G E+ + GD +K+ P+ ++ RFA+R+ +TV GV+ + Sbjct: 192 LAEALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVL--SKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMKVTLICPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESM (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 62/217 (28.57%), Postives = 103/217 (47.47%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L +ALD+ I EP+R DKP +P++DV+ I G GTV GRVE G+++ G V TT+ VEM + L E G+N G ++ D++RG V SK F S+V +++ + G + P + + +++ I+ G E+ + GD +K+ P+ ++ RFA+R+ +TV GV+ + Sbjct: 192 LAEALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVL--SKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMKVTLICPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU1_ALKMQ (Elongation factor Tu 1 OS=Alkaliphilus metalliredigens (strain QYMF) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.356e-13 Identity = 60/218 (27.52%), Postives = 103/218 (47.25%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L DA+D I EP R +DKP +P++DV+ I G GTV GR+E G++K +V + V VEM + L + GDNVG ++ + +++RG V +K + F ++V ++ + G + P D + + +++ I G E+ + GD +++ P+ E RFA+R+ +TV GV+ S+ Sbjct: 194 LFDAIDTWIPEPVRDTDKPFLMPVEDVFSITGRGTVATGRIERGIVKVQEEISLVGLSEAPRKLVVTGVEMFRKLLDQGQAGDNVGILLRGIQRDEIERGQVL--AKTGSIQPHTKFMAEVYVLKK--EEGGRHTPFFDGYRPQFYFRTTDVTGSIKLPEGVEM------VMPGDNITMEIELISPIATEEGL------RFAIREGGRTVGAGVVASI 395
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_ZYMMO (Elongation factor Tu OS=Zymomonas mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 67/224 (29.91%), Postives = 112/224 (50.00%), Query Frame = 2 Query: 104 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGD--AGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 +L+ A+D I +P+RP DK +P++DV+ I G GTV GRVETG++K G V GL T V VEM + L + GDN+G ++ A +++RG V +K F ++V +++ G + P + + +++ +I L ++ + + GD A VK+I P+ ++ P RFA+R+ +TV GV+ S+ K Sbjct: 194 SLMAAVDEYIPQPERPLDKSFLMPIEDVFSISGRGTVVTGRVETGIVKVGEEVEI--VGLRDTKKTTVTGVEMFRKLLDQGQAGDNIGALLRGTARTEVERGQVL--AKPGSITPHTEFKAEVYVLSK--DEGGRHTPFFANYRPQFYFRTTDVTGEI------TLPEDVEMVMPGDNIAFGVKLI--APIAMD------PGLRFAIREGGRTVGAGVVSSIIK 397 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |