DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_UREU1 (Elongation factor Tu OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 73/249 (29.32%), Postives = 121/249 (48.59%), Query Frame = 2 Query: 44 GFEGDNM-IERSTNLDWYKGPT--------LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKS 745 GF+GDN + R + L +G L+DA+D+ I P+R +DKP L ++DV+ I G GTV GRVE G LK V GL T V +EM ++L +A GDN G ++ + +D++RG V K + FT++V I+ + G + P++ + + +++ I +G +L + GD + + P+ +E S +F++R+ +TV G VIK+ Sbjct: 162 GFDGDNTPVIRGSGLKALEGDPVWEAKIDELMDAVDSWIPLPERSTDKPFLLAIEDVFTISGRGTVVTGRVERGTLKVNDEVEI--VGLKDTQKTVVTGIEMFRKSLDQAEAGDNAGILLRGIKKEDVERGQVL--VKPGSIKPHRTFTAKVYILKK--EEGGRHTPIVSGYRPQFYFRTTDVTGAISLPAGVDL------VMPGDDVEMTVELIAPVAIEDGS------KFSIREGGKTVGHGSVIKT 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_SYNSC (Elongation factor Tu OS=Synechococcus sp. (strain CC9605) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 67/250 (26.80%), Postives = 114/250 (45.60%), Query Frame = 2 Query: 17 EKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEL---VTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 + +P V +SG + IE + K L+ A+D+ I EP+R DKP + ++DV+ I G GTV GR+E G++K G + T T V VEM + L E + GDNVG ++ + +D++RG V K F QV ++ + G + P + ++ +++ +T G +E + GD + P+ +E RFA+R+ +T+ GV+ + Sbjct: 166 DDIPVVQVSGLKA---IEGEAEWE-AKIEELMAAVDSSIPEPEREVDKPFLMAVEDVFSITGRGTVATGRIERGIVKVGEEIEIVGIKDTRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVL--VKPGSITPHTKFEGQVYVLKK--EEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVE----MVMPGDNIQMTGELICPVAIEQGM------RFAIREGGRTIGAGVVSKI 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 69/251 (27.49%), Postives = 116/251 (46.22%), Query Frame = 2 Query: 17 EKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEL---VTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLG-RFAVRDMRQTVAVGVIKSV 748 + +P V +SG + IE + K L+ A+D +I EP+R DKP + ++DV+ I G GTV GR+E G++K G + V T V VEM + L E + GDNVG ++ + +D++RG V K F QV ++ + G + P + ++ +++ +T G +E + GD + P+ +E LG RFA+R+ +T+ GV+ + Sbjct: 166 DDIPVVQVSGLKA---IEGEAEWE-AKIEELMAAVDASIPEPEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVGEEVEVVGIREPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVL--VKPGSITPHTKFEGQVYVLKK--EEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVE----MVMPGDNIQMTGELICPVAME-------LGMRFAIREGGRTIGAGVVSKI 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_SYNR3 (Elongation factor Tu OS=Synechococcus sp. (strain RCC307) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 65/253 (25.69%), Postives = 114/253 (45.06%), Query Frame = 2 Query: 17 EKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLG-----RFAVRDMRQTVAVGVIKSV 748 + +P V +SG + + E +D L+ A+D NI EP R DKP + ++DV+ I G GTV GR+E G++K G + T + V VEM + L E + GDNVG ++ + +D++RG V K F +V ++ + G + P + ++ +++ +I + + D G V+M+ + T P+ RFA+R+ +T+ GV+ + Sbjct: 166 DDIPVVQVSGLKAIEGEAEWEAKID-----ELMAAVDANIPEPVREVDKPFLMAVEDVFSITGRGTVATGRIERGIVKVGEEIEIVGIKDTRKSTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVL--VKPGSITPHTKFEGEVYVLKK--EEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTDR------------DGGNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVTKI 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_STRZT (Elongation factor Tu OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 751 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ + GD + + P+ VE + F++R+ +TV G++ +E Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM------VMPGDNVTIDVELIHPIAVEQGT------TFSIREGGRTVGSGMVTEIE 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_STRZP (Elongation factor Tu OS=Streptococcus pneumoniae (strain P1031) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 751 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ + GD + + P+ VE + F++R+ +TV G++ +E Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM------VMPGDNVTIDVELIHPIAVEQGT------TFSIREGGRTVGSGMVTEIE 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_STRZJ (Elongation factor Tu OS=Streptococcus pneumoniae (strain JJA) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 751 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ + GD + + P+ VE + F++R+ +TV G++ +E Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM------VMPGDNVTIDVELIHPIAVEQGT------TFSIREGGRTVGSGMVTEIE 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_STRR6 (Elongation factor Tu OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 751 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ + GD + + P+ VE + F++R+ +TV G++ +E Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM------VMPGDNVTIDVELIHPIAVEQGT------TFSIREGGRTVGSGMVTEIE 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_STRPN (Elongation factor Tu OS=Streptococcus pneumoniae GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 751 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ + GD + + P+ VE + F++R+ +TV G++ +E Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM------VMPGDNVTIDVELIHPIAVEQGT------TFSIREGGRTVGSGMVTEIE 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_STRPJ (Elongation factor Tu OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 751 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ + GD + + P+ VE + F++R+ +TV G++ +E Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM------VMPGDNVTIDVELIHPIAVEQGT------TFSIREGGRTVGSGMVTEIE 397 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |