DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_NITSB (Elongation factor Tu OS=Nitratiruptor sp. (strain SB155-2) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 60/218 (27.52%), Postives = 105/218 (48.17%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L++A+D I P+R DKP +P++DV+ I G GTV GR+E GV+K G +V P+ TT V VEM + L + GDNVG ++ ++++RG V ++ F +++ ++ + G + P + V+ +++ I G E+ + GD + P+ +E + RFA+R+ +TV GV+ + Sbjct: 197 LMEAVDEYIPTPERDIDKPFLMPIEDVFSISGRGTVVTGRIERGVVKVGDEIEIVGLRPTQKTT-VTGVEMFRKELDQGEAGDNVGVLLRGTKKEEVERGQVL--AQPGTITPHTKFEAEIYVLTK--EEGGRHTPFFSGYRPQFYVRTTDVTGTITLPEGVEM------VMPGDNVKINAELIAPIALEEGT------RFAIREGGRTVGAGVVSKI 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_MYCUA (Elongation factor Tu OS=Mycobacterium ulcerans (strain Agy99) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 67/255 (26.27%), Postives = 114/255 (44.71%), Query Frame = 2 Query: 11 YPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 + E P V +S EGD S L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE G++ +V P+ T V VEM + L + GDNVG ++ + +D++RG V K F QV I++ G + P + + + +++ + G E+ + GD + + +P+ ++ RFA+R+ +TV G + + K Sbjct: 165 FDEDAPVVRVSALKALEGDPKWVESVE-------QLMDAVDESIPDPVRETDRPFLMPVEDVFTITGRGTVVTGRVERGIINVNEEVEIVGIRPTSTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVV--VKPGTTTPHTEFEGQVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTNISVKLIQPVAMDDGL------RFAIREGGRTVGAGRVVKIIK 396
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_MYCMM (Elongation factor Tu OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 67/255 (26.27%), Postives = 114/255 (44.71%), Query Frame = 2 Query: 11 YPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 + E P V +S EGD S L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE G++ +V P+ T V VEM + L + GDNVG ++ + +D++RG V K F QV I++ G + P + + + +++ + G E+ + GD + + +P+ ++ RFA+R+ +TV G + + K Sbjct: 165 FDEDAPVVRVSALKALEGDPKWVESVE-------QLMDAVDESIPDPVRETDRPFLMPVEDVFTITGRGTVVTGRVERGIINVNEEVEIVGIRPTSTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVV--VKPGTTTPHTEFEGQVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTNISVKLIQPVAMDDGL------RFAIREGGRTVGAGRVVKIIK 396
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_KLEP7 (Elongation factor Tu OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=tufA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 71/246 (28.86%), Postives = 112/246 (45.53%), Query Frame = 2 Query: 38 ISGFEGD-----NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 + EGD +IE + +LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V T T VEM + L E G+NVG ++ + ++++RG V +K F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 176 LKALEGDAEWEAKIIELAGHLDTY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETAKTTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTINPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_DESDA (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 64/220 (29.09%), Postives = 104/220 (47.27%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 LLDA D+ I EP R DKP +P++DV+ I G GTV GRVE GV+K G +V P+ TT VEM + L + GDN+G ++ D++RG V + K + F ++V +++ + G + P + + +++ I G E+ + GD + P+ +E RFA+R+ +TV GV+ + + Sbjct: 195 LLDACDSFIPEPVRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEIVGIKPTVKTT-CTGVEMFRKLLDQGEAGDNIGALLRGTKRDDVERGQVLAAPKSITPHK--KFKAEVYVLSK--EEGGRHTPFFTGYRPQFYFRTTDITGVISLPEGVEM------VMPGDNSQFIVELIAPIAMEAGL------RFAIREGGRTVGSGVVTEINE 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_CLOD6 (Elongation factor Tu OS=Clostridium difficile (strain 630) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 67/237 (28.27%), Postives = 110/237 (46.41%), Query Frame = 2 Query: 53 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT-----TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 GD ++E +D Y I P+R +DKP +P++DV+ I G GTV GRVE GVLK V GLT V VEM + L +A GDN+G ++ V +++RG V +K + FT++V ++ + G + P D + + +++ G E+ + GD +++ +VVE RF++R+ +TVA GV+ ++ Sbjct: 188 GDKIVELFEQIDEY-----------IPAPERDTDKPFLMPVEDVFSITGRGTVATGRVERGVLKVQDEVEL--VGLTEAPRKVVVTGVEMFRKLLDQAQAGDNIGALLRGVQRNEIERGQVL--AKTGSVKAHTKFTAEVYVLKK--EEGGRHTPFFDGYRPQFYFRTTDVTGACKLPEGIEM------VMPGDNVTMEVDLINSIVVEEGL------RFSIREGGRTVASGVVATI 395
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_AZOC5 (Elongation factor Tu OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 59/210 (28.10%), Postives = 100/210 (47.62%), Query Frame = 2 Query: 128 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 I +P+RP D+P +P++DV+ I G GTV GRVE G++K G +V P+ TT V +EM + L + GDNVG ++ +D++RG V K + F ++ I+ + G + P + + +++ + G E+ + GD V + P+ +E RFA+R+ +TV GV+ S+ Sbjct: 203 IPQPERPVDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGDEVEIVGIRPTVKTT-VTGIEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVV--CKPGSVKPHTKFKAEAYILTK--EEGGRHTPFFTNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNISVDVQLIVPIAMEEKL------RFAIREGGRTVGAGVVASI 395
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_ACTPJ (Elongation factor Tu OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 64/235 (27.23%), Postives = 110/235 (46.81%), Query Frame = 2 Query: 56 DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 + ++E + +LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ V VEM + L E G+NVG ++ ++++RG V +K +F S+V +++ + G + P + + +++ I+ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + K Sbjct: 187 EKILELAHHLDTY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKSGEEVEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL--AKPGTITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMTVSLIHPIAMDEGL------RFAIREGGRTVGAGVVAKIIK 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_ACTP2 (Elongation factor Tu OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.770e-13 Identity = 64/235 (27.23%), Postives = 110/235 (46.81%), Query Frame = 2 Query: 56 DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 + ++E + +LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ V VEM + L E G+NVG ++ ++++RG V +K +F S+V +++ + G + P + + +++ I+ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + K Sbjct: 187 EKILELAHHLDTY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKSGEEVEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL--AKPGTITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMTVSLIHPIAMDEGL------RFAIREGGRTVGAGVVAKIIK 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_TREDE (Elongation factor Tu OS=Treponema denticola GN=tuf PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 55/198 (27.78%), Postives = 97/198 (48.99%), Query Frame = 2 Query: 11 YPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEK 592 +PE P + S F+ + E +T D LL +D +P R SDKP LP++D++ I G GTV GR+E GV+K +V P+ T V +EM ++ L E GDNVG ++ + K+++RG V +K F +Q+ +++ + G ++P + + +++ ++ G ++ K Sbjct: 163 FPEDTPIIKGSAFKA--LQEGATAEDTACIEELLKTMDEYFKDPVRDSDKPFLLPIEDIFTIQGRGTVVTGRIERGVIKMNEEVEIVGIKPTKKTV-VTGIEMFNKLLDEGEAGDNVGLLLRGIEKKEVERGQVL--AKPGSIHPHTKFEAQIYVLSK--EEGGRHSPFFSGYRPQFYFRTTDITGTVNLPEGTDMVK 353 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |