DY305443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_STACT (Elongation factor Tu OS=Staphylococcus carnosus (strain TM300) GN=tuf PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 59/220 (26.82%), Postives = 106/220 (48.18%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 L+ A+D+ I P+R SDKP +P++DV+ I G GTV GRVE G +K G ++ + T V VEM + L A GDN+G ++ VA +D++RG V + F + V +++ G + P + + +++ ++ G E+ + GD + + P+ +E + RF++R+ +TV GV+ +++ Sbjct: 192 LMQAVDDYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEIIGITEESMKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVL--AAPGSITPHTKFKADVYVLSK--DEGGRHTPFFTNYRPQFYFRTTDVTGVVNLPEGTEM------VMPGDNVEMTVELIAPIAIEDGT------RFSIREGGRTVGSGVVTEIQQ 395
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_RICRS (Elongation factor Tu OS=Rickettsia rickettsii (strain Sheila Smith) GN=tuf PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 64/256 (25.00%), Postives = 122/256 (47.66%), Query Frame = 2 Query: 5 GYYPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 G+ +++P + + EG E++ N L+DA+D+ I +P R +DKP +P++DV+ I G GTV GRVE+G++K G + GL T VEM + L E GDNVG ++ ++++RG V +K + F ++V +++ + G + P + + + +++ I +L + + + GD + KP+ ++ +F++R+ +TV GV+ + Sbjct: 162 GFPGDEIPIIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEI--VGLKDTQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_RICRO (Elongation factor Tu OS=Rickettsia rickettsii (strain Iowa) GN=tuf PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 64/256 (25.00%), Postives = 122/256 (47.66%), Query Frame = 2 Query: 5 GYYPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 G+ +++P + + EG E++ N L+DA+D+ I +P R +DKP +P++DV+ I G GTV GRVE+G++K G + GL T VEM + L E GDNVG ++ ++++RG V +K + F ++V +++ + G + P + + + +++ I +L + + + GD + KP+ ++ +F++R+ +TV GV+ + Sbjct: 162 GFPGDEIPIIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEI--VGLKDTQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_RICPU (Elongation factor Tu OS=Rickettsia peacockii (strain Rustic) GN=tuf PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 64/256 (25.00%), Postives = 122/256 (47.66%), Query Frame = 2 Query: 5 GYYPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 G+ +++P + + EG E++ N L+DA+D+ I +P R +DKP +P++DV+ I G GTV GRVE+G++K G + GL T VEM + L E GDNVG ++ ++++RG V +K + F ++V +++ + G + P + + + +++ I +L + + + GD + KP+ ++ +F++R+ +TV GV+ + Sbjct: 162 GFPGDEIPIIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEI--VGLKDTQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_RICAE (Elongation factor Tu OS=Rickettsia africae (strain ESF-5) GN=tuf PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 64/256 (25.00%), Postives = 122/256 (47.66%), Query Frame = 2 Query: 5 GYYPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 G+ +++P + + EG E++ N L+DA+D+ I +P R +DKP +P++DV+ I G GTV GRVE+G++K G + GL T VEM + L E GDNVG ++ ++++RG V +K + F ++V +++ + G + P + + + +++ I +L + + + GD + KP+ ++ +F++R+ +TV GV+ + Sbjct: 162 GFPGDEIPIIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEI--VGLKDTQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_RALSO (Elongation factor Tu OS=Ralstonia solanacearum GN=tufA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 61/217 (28.11%), Postives = 102/217 (47.00%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L DALD+ I P+R D +P++DV+ I G GTV GR+E G++K G + T T VEM + L + GDNVG ++ +D++RG V K + +FT +V I++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 194 LADALDSYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRIERGIIKVGEEIEIVGIKATQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--CKPGSIKPHTHFTGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_RALME (Elongation factor Tu OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=tuf1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 63/218 (28.90%), Postives = 104/218 (47.71%), Query Frame = 2 Query: 107 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 748 L DALD I P+R D +P++DV+ I G GTV GR+E GV+K G +V P+ TT VEM + L + GDNVG ++ +D++RG V K + +FT +V I++ G + P + + + +++ I EL ++ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 194 LADALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRIERGVIKVGEEIEIVGIRPTVKTT-CTGVEMFRKLLDQGQAGDNVGLLLRGTKREDVERGQVL--CKPGSIKPHTHFTGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPQDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_PSEAK (Elongation factor Tu, chloroplastic OS=Pseudendoclonium akinetum GN=tufA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 66/237 (27.85%), Postives = 108/237 (45.57%), Query Frame = 2 Query: 56 DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 754 D +++ N+D Y I P R +DK + ++DV+ I G GTV G VE G LK G V GL TT V +EM + L E + GDNVG ++ V +++RG V + + F +QV I+ + G + P + V+ +++ KI+ + + E +GD + + +P+ VE RFA+R+ +TV GV+ ++ K Sbjct: 197 DKILKLMQNVDTY-----------IPTPVRETDKTFLMAVEDVFSITGRGTVATGLVERGTLKTGATVEI--IGLRDTTTTTVTGLEMFQKTLDETVAGDNVGVLLRGVQKDNIQRGMVL--AAPGTIKPHTKFEAQVYILTK--EEGGRHTPFFPGYRPQFYVRTTDVTGKIESFTADD-GSEALMATSGDRLKMVVELIQPIAVENGM------RFAIREGGRTVGAGVVSTILK 409
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_PROMT (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL2A) GN=tuf PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 68/254 (26.77%), Postives = 115/254 (45.28%), Query Frame = 2 Query: 17 EKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLG-----RFAVRDMRQTVAVGVIKSV 748 + +P V +SG + IE DW K L+ A+D +I EP+R DKP + ++DV+ I G GTV GR+E G + G +V + LTT V VEM + L E + GDNVG ++ + +D++RG V K F +V ++ + G + P + ++ +++ +I + D V+M+ + T P+ RFA+R+ +T+ GV+ + Sbjct: 166 DDIPVVQVSGLKA---IEGEA--DWETKIDDLMTAVDASIPEPEREIDKPFLMAIEDVFSITGRGTVATGRIERGKVTVGEEVEIVGIRDTRLTT-VTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVL--VKKGSITPHTKFEGEVYVLKK--EEGGRHTPFFAGYRPQFYIRTTDVTGQITA------------FTSDDGSNVEMVMPGDRIKMTGELIAPVAIEQGMRFAIREGGRTIGAGVVSKI 397
BLAST of DY305443 vs. ExPASy Swiss-Prot
Match: EFTU_PHATR (Elongation factor Tu, chloroplastic OS=Phaeodactylum tricornutum GN=tufA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.312e-13 Identity = 62/247 (25.10%), Postives = 111/247 (44.94%), Query Frame = 2 Query: 38 ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLG-----RFAVRDMRQTVAVGVIKSVEK 754 I + ++R N K L+DA+D I P+R +K + ++DV+ I G GTV GR+E GV+K G + + TT + +EM + L+E GDNVG ++ V ++++RG V +K +F S+V ++ G + P + V+ +++ I + + D +V+M+ + T P+ RFA+R+ +T+ GV+ + K Sbjct: 179 IEAITANPTVKRGDNKWVDKIYALMDAVDEYIPTPERDVEKTFLMAIEDVFSITGRGTVATGRIERGVVKVGENVEIVGVTDTQTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVL--AKPGTITPHTSFESEVYVLTK--DEGGRHTPFFTGYRPQFYVRTTDVTGSITQFTA------------DDGSVVEMVMPGDRIKMTAEFIYPVAIEAGMRFAIREGGRTIGAGVVSKIVK 409 The following BLAST results are available for this feature:
BLAST of DY305443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305443 ID=DY305443; Name=DY305443; organism=Citrus sinensis; type=EST; length=1161bpback to top |