DY305441

Overview
NameDY305441
Unique NameDY305441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305441 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 72/221 (32.58%), Postives = 116/221 (52.49%), Query Frame = 3
Query:   66 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWQQN--PLLPRDPYQRAMARFWAKYSEELMVKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVINEWSTKFVNHPLIKENLPARDRMLVYFRKLSEEF 722
            +EV LL FW S F  R+++AL +K +  YEY +ED+ NKSP LL++NP++KK+PV IH  K + ES+I +EYI+E W+     LLP DPY RA ARFWA Y ++ +      L                   K+    +G  G     G  + G++++A      W   +E  G+F      + P    W+ + +    + ++LP + ++L + + L ++F
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEI-KYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKV---LEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218          
BLAST of DY305441 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.261e-25
Identity = 75/205 (36.59%), Postives = 107/205 (52.20%), Query Frame = 3
Query:   63 AKEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWQQN-PLLPRDPYQRAMARFWAKYSEELMVKAFMALVLXXXXXXXXXXXXXXGLEK-IEGEFKGKSGLLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVI------NEWSTKFVNHP 653
            +  V LL F  S F  R+++AL  KG+  YE  EE++ +KSP LLE+NPV+KK+P+ IH  K + ESL ILEYIDE W +  PLLP DPYQR+ ARFWA Y +  +      +                 + K +EGE   K+      G  N+G++++A      W   +E   +F I    +  V+      NE  +K + HP
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGI-KYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYF----GGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVWQNCMENERVSKSLPHP 202          
BLAST of DY305441 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.871e-22
Identity = 70/228 (30.70%), Postives = 115/228 (50.44%), Query Frame = 3
Query:   66 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWQQNP-LLP-------RDPYQRAMARFWAKYSEELMVKAFMAL-VLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVINEWSTKFVNHPLIKENLPARDRMLVYFRKLSEEF 722
            KE+ LL FW SPF  R ++A+ +KG+ ++EY EED+ NKS  LL  NPV++K+PV +H  + V+ESL+IL+Y+D+ +   P LLP          Y RA ARFWA Y +  +      L  L               L  +E E  G        G G +G++++A      W   +E  G F +   +  P +  W+ +      + ++LP+ +++  +   L +++
Sbjct:    5 KELVLLDFWVSPFGQRCRIAMAEKGL-EFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAEL-GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKY 228          
BLAST of DY305441 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.444e-22
Identity = 69/228 (30.26%), Postives = 115/228 (50.44%), Query Frame = 3
Query:   66 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWQQNP--LLPRD------PYQRAMARFWAKYSEELMVKAFMAL-VLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVINEWSTKFVNHPLIKENLPARDRMLVYFRKLSEEF 722
            KE+ LL FW SPF  R ++A+ +KG+ ++EY EED+ NKS  LL  NPV++K+PV +H  + V+ESL+IL+Y+D+ +   P  L P +       Y RA ARFWA Y +  +      L  L               L  +E E  G        G G +G++++A      W   +E  G F +   +  P +  W+ +      + ++LP+ +++  +   L +++
Sbjct:    5 KELVLLDFWVSPFGQRCRIAMAEKGL-EFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAEL-GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKY 228          
BLAST of DY305441 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.286e-22
Identity = 72/224 (32.14%), Postives = 113/224 (50.45%), Query Frame = 3
Query:   78 LLGFWASPFVFRVKVALQQKGVVDYEYIEEDIF-NKSPRLLELNPVYKKVPVFIHGE-KVVNESLIILEYIDETWQQNP-------LLPRDPYQRAMARFWAKYSEELMVKAFMALVLXXXXXXXXXXXXXX--GLEKIEGEFKGKSG--LLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVINEWSTKFVNHPLIKENLPARDRMLVYFRKL 710
            +LG   SPF  R ++AL  +GV  YE ++E +   KS RLL  NPVY K+PV +  + + + ES +I++YI++  +++        LLP DPY+RAM RFW  + ++    A  A+ L                 L  +E  FK +S     F+ G+   G L+LA G  L  L   E      ++D    P+++ WS +F  HP  K  LP  ++++ + R L
Sbjct:    3 VLGGEVSPFTARARLALDLRGVA-YELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTRFL 225          
BLAST of DY305441 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 3
Query:   78 LLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPR--LLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWQQNPLLPRDPYQRAMAR 347
            L  +W S   +RV++AL  K V DYEY   D+ ++  +  L E+NP   KVP F+   +V+ ESL I+EY++ET    PLLP+DP +RA AR
Sbjct:    8 LYSYWRSSCSWRVRIALALKNV-DYEYKTVDLLSEEAKSKLKEINPA-AKVPTFVVDGQVITESLAIIEYLEETHPDVPLLPKDPIKRAHAR 97          
BLAST of DY305441 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.324e-11
Identity = 38/95 (40.00%), Postives = 63/95 (66.32%), Query Frame = 3
Query:   66 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIF---NKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWQQNPLLPRDPYQRAM 341
            +++ L  F  S   +RV++AL  KG+ D+EY   D+F   + +P  L+LNP+   VPV +HG+ V+ +SL I+ Y++E + +NPLLP+D  +RA+
Sbjct:    7 QKMQLYSFSLSSCAWRVRIALHLKGL-DFEYKAVDLFKGEHLTPEFLKLNPL-GYVPVLVHGDIVIADSLAIIMYLEEKFPENPLLPQDLQKRAL 99          
The following BLAST results are available for this feature:
BLAST of DY305441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GSTXC_TOBAC7.341e-2732.58Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_NICPL5.261e-2536.59Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ1.871e-2230.70Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI2.444e-2230.26Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE9.286e-2232.14Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
MAAI_CAEEL3.911e-1244.57Probable maleylacetoacetate isomerase OS=Caenorhab... [more]
GSTZ1_DIACA4.324e-1140.00Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1AA01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305441 ID=DY305441; Name=DY305441; organism=Citrus sinensis; type=EST; length=893bp
GAATAAATCATCTCATCACAAAGCATTACAGAGATCAATTAATTATCAGC
GAAAATAATATGGCCAAAGAAGTGACGCTTTTGGGGTTTTGGGCAAGTCC
ATTTGTGTTCAGGGTAAAAGTCGCTCTGCAGCAGAAGGGTGTTGTTGATT
ATGAATACATTGAAGAAGATATCTTTAACAAGAGCCCCAGGCTCTTGGAA
CTGAACCCAGTTTATAAGAAGGTTCCTGTGTTCATCCATGGCGAGAAAGT
GGTCAATGAGTCGTTGATTATTCTTGAGTACATCGATGAGACATGGCAGC
AAAATCCTTTGTTGCCTCGAGACCCTTACCAAAGAGCCATGGCTCGTTTC
TGGGCTAAATATTCAGAAGAACTGATGGTGAAAGCATTCATGGCTCTGGT
TTTGAAAGGAGAGGCAAAGGAGAAAAATGCGAAAGAATTTGCAGAAGGAT
TGGAGAAGATAGAAGGGGAATTCAAGGGAAAGAGCGGCTTGTTGTTTGCT
GAAGGAGAGGGCAATATTGGGTATTTGGAACTTGCATTTGGTTGGATTCT
TTACTGGCTGCCTGTTTGGGAAGAAGCTGGATCCTTTCAAATTCTTGACC
CTCAGAAATTTCCAGTCATCAATGAATGGAGCACCAAGTTTGTGAATCAC
CCTCTCATCAAAGAAAACTTGCCGGCCAGGGACCGGATGCTCGTCTATTT
CCGCAAACTCAGTGAAGAGTTCTTTACCTTATTCCGGGCATAGAGCATCC
AAGAATTATGGATCAAATAATATTTGTGCTAATAAAGGTGGTGTTGTGGT
GTGTTGTAATGACCTGTATTTTATTTTCCTCTTTCTTTGCATCTTTATTT
CCAATTTTGTATAAAATTACTCTTTAAATTGTTAAAATTAACT
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