DY259695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_SULIM (50S ribosomal protein L4P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl4p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.171e-29 Identity = 81/247 (32.79%), Postives = 125/247 (50.61%), Query Frame = 3 Query: 93 LVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 LV S+ D + V LP + +R DI+ V +S QP AG +TSAES+G ++R+PRV +G+ A GGR+ P + ++ ++N +K+ V ARGH + P+VV+D S++ S + L++IG Y D ++ K+ IR GKGKMR R+Y GPL++ + +VKA RNI GV+VV + ++++ LAPG H GR+ Sbjct: 5 LVKKNSVILDKDGNKVKEVELPFIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTSAESFGINLGMARVPRVKN-----SGEAALAPNTVGGRLTFPPSVDKKLVEEVNDKEKQLAVISALSATADTVFVKARGHVFKDSVSFPIVVTDDIVSLKTASEVEEFLEKIGVYDDVKRVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHPGRL 246
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_SULIL (50S ribosomal protein L4P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl4p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.171e-29 Identity = 82/247 (33.20%), Postives = 125/247 (50.61%), Query Frame = 3 Query: 93 LVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 LV S+ D + V LP + +R DI+ V +S QP AG +TSAES+G ++R+PRV +G+ A GGR+ P + ++ + N +K+ V ARGH + P+VV+D S++ S + L++IG Y D ++ K+ IR GKGKMR R+Y GPL++ + +VKA RNI GV+VV + ++++ LAPG HSGR+ Sbjct: 5 LVKKNSVILDKDGNKVKEVELPFIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTSAESFGINLGMARVPRVKN-----SGEAALAPNTVGGRLTFPPSVDKKLVEEANDKEKQLAVISALSATADKVFVKARGHVFKDSVSFPIVVTDDIVSLKTASEVEEFLEKIGVYDDVKRVKERIRIRAGKGKMRGRKYKESIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGTHSGRL 246
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_SULIK (50S ribosomal protein L4P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl4p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.171e-29 Identity = 81/247 (32.79%), Postives = 125/247 (50.61%), Query Frame = 3 Query: 93 LVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 LV S+ D + V LP + +R DI+ V +S QP AG +TSAES+G ++R+PRV +G+ A GGR+ P + ++ ++N +K+ V ARGH + P+VV+D S++ S + L++IG Y D ++ K+ IR GKGKMR R+Y GPL++ + +VKA RNI GV+VV + ++++ LAPG H GR+ Sbjct: 5 LVKKNSVILDKDGNKVKEVELPFIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTSAESFGINLGMARVPRVKN-----SGEAALAPNTVGGRLTFPPSVDKKLVEEVNDKEKQLAVISALSATADTVFVKARGHVFKDSVSFPIVVTDDIVSLKTASEVEEFLEKIGVYDDVKRVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHPGRL 246
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_SULIA (50S ribosomal protein L4P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl4p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.171e-29 Identity = 81/247 (32.79%), Postives = 125/247 (50.61%), Query Frame = 3 Query: 93 LVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 LV S+ D + V LP + +R DI+ V +S QP AG +TSAES+G ++R+PRV +G+ A GGR+ P + ++ ++N +K+ V ARGH + P+VV+D S++ S + L++IG Y D ++ K+ IR GKGKMR R+Y GPL++ + +VKA RNI GV+VV + ++++ LAPG H GR+ Sbjct: 5 LVKKNSVILDKDGNKVKEVELPFIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTSAESFGINLGMARVPRVKN-----SGEAALAPNTVGGRLTFPPSVDKKLVEEVNDKEKQLAVISALSATADTVFVKARGHVFKDSVSFPIVVTDDIVSLKTASEVEEFLEKIGVYDDVKRVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHPGRL 246
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_PYRHO (50S ribosomal protein L4P OS=Pyrococcus horikoshii GN=rpl4p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.171e-29 Identity = 78/229 (34.06%), Postives = 116/229 (50.66%), Query Frame = 3 Query: 147 VPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 + LP V RPD++ + QP AG + E+ G G ++R+ R+ + AF RGGR P K+ + IN ++R +V +RGH ++ VP++PL+V D + V KT ++ K++G + D E+AK+ G+R GKGKMR RRY KGPL+V + +V RN PGV+VV V+ L + LAPG H GR+ Sbjct: 16 IELPRVFLTPFRPDLIRRAVIASWTHRIQPQGRDPMAGKRRVTENIGKGHGMARVERLKTPPRY----AAFVPFARGGRRAHPPKVEKIIWEGINKKERRLAIMSAIAATANYDIVKSRGHIVDNVPQLPLIVVDDLQKVSKTRETREIFKKLGIWEDIERAKEKSGVRAGKGKMRGRRYKKAKGPLIVV-GKNEGIVFGARNHPGVDVVVVDNLGVEHLAPGTHPGRL 239
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_METM5 (50S ribosomal protein L4P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl4p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.171e-29 Identity = 88/257 (34.24%), Postives = 126/257 (49.03%), Query Frame = 3 Query: 96 VTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV-----NGLEKI 851 V V +L+G D + LP V + RPD++ + QP AG++TSA+S G G +R+ R G GAF GGR P K+ + +IN +K P +V ARGHKIE VP +PLVV+ E + KT L V K + AD EKAKD I+ G+ K+R R+Y + LVV + + + A RN+ GV+V+ L+ + +APG +GR+ N +EKI Sbjct: 3 VKVYNLDGSEKGD----IELPAVFETEYRPDLIKRAVISSLTAKLQPKGCDAFAGYRTSAKSIGKGHGKARVRRTAQGA------GAFVPQAVGGRRAHPPKVEKILFERINKKEKLKALASAIAASAIPEIVSARGHKIEGVPSLPLVVNAEFEGLVKTKEVLDVFKALNLAADVEKAKDGIKIKAGRAKLRGRKYKKPRSVLVVV-GDACEAIAASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTENAIEKI 248
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_SULTO (50S ribosomal protein L4P OS=Sulfolobus tokodaii GN=rpl4p PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 1.530e-29 Identity = 82/251 (32.67%), Postives = 124/251 (49.40%), Query Frame = 3 Query: 120 DMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRVNGLEK--IGLLRK 866 D+ + + LP +R D++ V + + QP AG +TSA S+G ++R+PRV G+ A GGR+ P + ++ ++N +K+ + V RGH + ++ +P++V D + KT ++VL+ + Y D E+ KD IR GKGKMR RRY KGPL V VKA NIPGV+V+ L+++ LAPGGH GR+ K I +LRK Sbjct: 14 DLKGNKVEEIELPIFFSYPVRKDLIRRVFISEFTKALQPKGRDPMAGKRTSALSFGINLGLARVPRVK-----TTGEAALAPNTVGGRLAFPPTVEKKLVEEVNKKEKKLAIISALSATANMNFVKNRGH-VFSIDTLPIIVVDDITKLTKTKEIIEVLESLKVYEDVERVKDRIRIRSGKGKMRGRRYKEPKGPLFVIHENNPVFVKAASNIPGVDVILASDLSVIHLAPGGHPGRLTIYTKSSIDVLRK 258
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_HALWD (50S ribosomal protein L4P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl4p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.998e-29 Identity = 82/245 (33.47%), Postives = 122/245 (49.80%), Query Frame = 3 Query: 99 TVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 T+ +L GD A T+ LP V + RPD++ N +QPY AG +T AES+G+GR ++ +PR G R Q GR P K + + +N +++ PS V RGH+ E E+PLVVSD E + KT + VL+ +G +AD ++ +++ IR G+GK R R+Y K L + S E + KA RN+ G +VV ++ LAPG GR+ Sbjct: 4 TIHNLNGDKA----DTLELPAVFETPYRPDVIERAVVAAQANRKQPYGADPYAGMRTPAESFGSGRGMAHVPR-ENGQARRVPQAV------SGRKAHPPKAEKDQSKSVNTKERKLAFQSAVAATADPSQVEERGHQFENDVELPLVVSDEFEELIKTQEVVDVLESLGVHADIVRSDENKSIRAGRGKTRGRKYRRPKSILFITSDEPS---KAARNLAGADVVTAANVSAEDLAPGTQPGRL 234
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_METM7 (50S ribosomal protein L4P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl4p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.408e-29 Identity = 88/257 (34.24%), Postives = 127/257 (49.42%), Query Frame = 3 Query: 96 VTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV-----NGLEKI 851 V V +L+G D + LP V + RPD++ + QP AG++TSA+S G G +R+ R G GAF GGR P K+ + +IN +K P +V ARGHKIE VP +PLVV+ ES+ KT L+V K + AD +AKD I+ G+ K+R R+Y K LVV + + + A RN+ GV+V+ L+ + +APG +GR+ N +EKI Sbjct: 3 VKVYNLDGSEKGD----IELPAVFETEYRPDLIKRAVISSLTAKLQPKGCDAFAGYRTSAKSIGKGHGKARVRRTAQGA------GAFVPQAVGGRRAHPPKVEKILFERINRKEKLKALASAIAASAIPEIVSARGHKIEGVPSLPLVVNADFESLAKTKEVLEVFKTLKLDADLARAKDGIKIKAGRAKLRGRKYKKPKSVLVVV-GDACEAIAASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTENAIEKI 248
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_THEVO (50S ribosomal protein L4P OS=Thermoplasma volcanium GN=rpl4p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 8.394e-28 Identity = 78/261 (29.89%), Postives = 130/261 (49.81%), Query Frame = 3 Query: 96 VTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRVNGLEKIGLLRKLEEN 878 V + S+ G+ + + LP++ S+R D++ IS + RQPY S AG + + G +SR+PR+ GG A G G+ + ++ + IN +++ V RGH+ +P+VV D+ ++KT A+ +LK IG Y D ++K+ + IR G+GKMRNRRY K L+V + +K F+++PGV+V ++ L++ KLAPGG GR+ + + + E N Sbjct: 5 VPIYSINGEKRGE----IDLPEIFNYSVREDLIRKAFRAISLSLRQPYGSSPLAGLRRVGHTTKPGLGISRMPRIAGGSRVVGIASAVG-----GKSAHSPRSTKKLYVGINEKERKMAKFSAIAMTASADAVRKRGHRFSESLPLPVVVEDAVSGIKKTKDAVNLLKSIGLYEDILRSKEGKHIRAGRGKMRNRRYKVPKSLLIV--GTDSVSLKVFKSLPGVDVASMDSLSIRKLAPGGVGGRLTVYTESAIEKLREAN 254 The following BLAST results are available for this feature:
BLAST of DY259695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259695 ID=DY259695; Name=DY259695; organism=Citrus sinensis; type=EST; length=1275bpback to top |