DY259695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_METVS (50S ribosomal protein L4P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl4p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 8.394e-28 Identity = 85/257 (33.07%), Postives = 124/257 (48.25%), Query Frame = 3 Query: 96 VTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV-----NGLEKI 851 V V +L+G + LP V + RPD++ + QP AG++TSA+S G G +R+ R G GAF GGR P K+ + +IN ++ +V ARGHKIE VP +PLVV+ ES+ KT L V K + AD E+AKD I+ G+ K+R R+Y + LVV + V A RN+ GV+V+ L+ + +APG +GR+ N +EK+ Sbjct: 3 VKVYNLDGS----EKGAIELPSVFETEYRPDVIKRAVISSLTARLQPKGSDPLAGYRTSAKSIGKGHGKARVRRTAQGA------GAFVPQAVGGRRAHPPKVEKILFERINRKERLKALASAIAASANSEIVAARGHKIEGVPSLPLVVNAEFESLVKTKEVLSVFKALKLEADLERAKDGIKIKAGRAKLRGRKYKKPRSVLVVV-GDACDAVAASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTENAIEKL 248
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_METM6 (50S ribosomal protein L4P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl4p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 8.394e-28 Identity = 84/246 (34.15%), Postives = 120/246 (48.78%), Query Frame = 3 Query: 96 VTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 V V +L+G D + LP V + RPD++ + QP AG++TSA+S G G +R+ R G GAF GGR P K+ + +IN ++ P +V ARGHKIE VP +PLVV+ ES+ KT L V + AD E+AKD I+ G+ K+R R+Y K LVV + V A RN+ GV+V+ L+ + +APG +GR+ Sbjct: 3 VKVYNLDGSEKGD----IELPAVFETEYRPDLIKRAVISSLTAKLQPKGCDAFAGYRTSAKSIGKGHGKARVRRTAQGA------GAFVPQAVGGRRAHPPKVEKILFERINRKERLKALASAIAASANPEIVSARGHKIEGVPSLPLVVNAEFESLAKTKEVLGVFTALKLDADLERAKDGVKIKAGRAKLRGRKYKKPKSVLVVV-GDACDAVAASRNLAGVDVITANDLSAIHIAPGTMAGRL 237
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_HALSA (50S ribosomal protein L4P OS=Halobacterium salinarium GN=rpl4p PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 4.166e-27 Identity = 81/246 (32.93%), Postives = 120/246 (48.78%), Query Frame = 3 Query: 96 VTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 VTV+ L+GD A T+ LP V + +RPD+V N Q Y + AG +T+AES G+GR ++ +P+ G QGA GGR P K + +N +++ LV RGH + E PLVVSD E + KT + +L+ +G +AD E+A + + +R G+G +R R+Y L V ++E A RN+ GV+V +N LAPG GR+ Sbjct: 3 VTVRDLDGDDA----GTLDLPRVFEEPVRPDLVKRAVLAAQANRTQEYGADEYAGLRTTAESQGSGRGMAHVPKANG-------QGARVPQTVGGRKAHPPKAEKDHGLDVNDKERKAAVRAAVAATTDSELVADRGHNFDDDVEFPLVVSDDFEDLVKTQDVVSLLEALGVHADIERADEGRTVRAGQGTLRGRKYQEPTSILFVTASESGPSTAA-RNLAGVDVATGREVNAEDLAPGAEPGRL 236
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_HALS3 (50S ribosomal protein L4P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl4p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 4.166e-27 Identity = 81/246 (32.93%), Postives = 120/246 (48.78%), Query Frame = 3 Query: 96 VTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 VTV+ L+GD A T+ LP V + +RPD+V N Q Y + AG +T+AES G+GR ++ +P+ G QGA GGR P K + +N +++ LV RGH + E PLVVSD E + KT + +L+ +G +AD E+A + + +R G+G +R R+Y L V ++E A RN+ GV+V +N LAPG GR+ Sbjct: 3 VTVRDLDGDDA----GTLDLPRVFEEPVRPDLVKRAVLAAQANRTQEYGADEYAGLRTTAESQGSGRGMAHVPKANG-------QGARVPQTVGGRKAHPPKAEKDHGLDVNDKERKAAVRAAVAATTDSELVADRGHNFDDDVEFPLVVSDDFEDLVKTQDVVSLLEALGVHADIERADEGRTVRAGQGTLRGRKYQEPTSILFVTASESGPSTAA-RNLAGVDVATGREVNAEDLAPGAEPGRL 236
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_AERPE (50S ribosomal protein L4P OS=Aeropyrum pernix GN=rpl4p PE=3 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 2.067e-26 Identity = 77/231 (33.33%), Postives = 113/231 (48.92%), Query Frame = 3 Query: 144 TVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSA-ESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 +V LP + + +R D++ + QP AG +TSA S G GR V+R+PR+ G + + A NM RGGR P ++ + IN +KR LV RGH+ + +P+V+ S + A +L+ +G Y D +AK+ + GKGKMR RRY K L V + L A + +PGV+VV L++L LAPGGH GR+ Sbjct: 28 SVVLPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVRQRGHRF-SAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVLHLAPGGHPGRL 252
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_METJA (50S ribosomal protein L4P OS=Methanocaldococcus jannaschii GN=rpl4p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.527e-26 Identity = 79/245 (32.24%), Postives = 120/245 (48.98%), Query Frame = 3 Query: 132 DASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV-----NGLEKI 851 +A + LP V + RPD++ + QP AG +TSA++ G G +R+ RVP G R Q GGR P K+ + ++N ++ P LV RGH ET +P++V S E ++KT V +++G D +AK+ IR GKGKMR R+Y + LVV + + A RN+PGV+V+ + L ++ LAPGG +GR+ + LEK+ Sbjct: 11 EAVKEIDLPAVFEEEYRPDLIKRAFLSAFTARLQPKGSDPLAGLRTSAKNIGKGHGRARVDRVPQGWAARVPQAV------GGRRAHPPKVEKILWERVNKKERIKAIKSAIAATANPELVKERGHVFET-ENLPIIVESSFEELQKTKDVFAVFEKLGISDDVIRAKNGIKIRAGKGKMRGRKYKKPRSILVVV-GDKCNAILASRNLPGVDVITAKDLGIIHLAPGGVAGRLTVWTESALEKL 247
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_NATPD (50S ribosomal protein L4P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl4p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.134e-24 Identity = 79/245 (32.24%), Postives = 118/245 (48.16%), Query Frame = 3 Query: 99 TVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 TV+ L+GD A + V LP V + RPD++ N Q + AG +T AES G+GR ++ +PR G Q GR P K + IN +++ V RGH+ + ++PLVVSD E + KT A+ VL+ +G Y D E+A+D + +R G+G R R+Y K LVV S + + A RN+ G +V + +N+ LAPG +GR+ Sbjct: 4 TVRDLDGDDAGE----VELPAVFETDYRPDLIKRAVLAAQANRIQDTGTDEYAGLRTPAESPGSGRGMAHVPR-QNGRAREVPQAV------SGRPAHPPKAEKDRGLDINTKERKLATRSAIAATANADRVEERGHEFDEETDLPLVVSDEFEDLVKTQEAVDVLEALGVYDDIERAEDGKTVRAGRGTTRGRKYTEPKSVLVVTSDDQS---LAARNLAGSDVATADEVNVEDLAPGTQAGRL 234
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_NANEQ (50S ribosomal protein L4P OS=Nanoarchaeum equitans GN=rpl4p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.254e-23 Identity = 83/247 (33.60%), Postives = 118/247 (47.77%), Query Frame = 3 Query: 147 VPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSA------ESWGT--GRAVSRIPRVPGGGTHRAGQGAFGNMCRG--GRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRVNGLEKIGL 857 + LP IR D++ I + RQPY S AG Q SA SW T GR +SR+ R N+ + G+ P K + W+ KIN ++R LV ARGH I+ +P+VV D E + KT ++L ++G + E+ + + R GKGK R R YI RKGPL+V + +L KA NIPG+++ +V LN+ LAPG GR+ + K L Sbjct: 16 IELPPQFNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISRVSRAILRRHGALFYWVARNIAQAVKGKKAHPPKAEKDWYEKINKKERRLAIRSALAATKELDLVKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNVELLAPGAKPGRLLIISKDAL 258
BLAST of DY259695 vs. ExPASy Swiss-Prot
Match: RL4_HALMA (50S ribosomal protein L4P OS=Haloarcula marismortui GN=rpl4p PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 9.938e-21 Identity = 76/245 (31.02%), Postives = 116/245 (47.35%), Query Frame = 3 Query: 99 TVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVKVERLNLLKLAPGGHSGRV 833 T+ L+G+ TD V LPDV + +R D++G N +Q Y + AG +T AES+G+GR + +P+ G R Q GR P K + +N +++ LV RGH+ + E+P+VVSD E + KT + +L+ + +AD ++A D I+ G+G R R+Y L V S E + A RN+ G +V +N LAPGG GR+ Sbjct: 4 TIYDLDGN--TDGE--VDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGRARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDR-DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRA-DETKIKAGQGSARGRKYRRPASILFVTSDEPS---TAARNLAGADVATASEVNTEDLAPGGAPGRL 232 The following BLAST results are available for this feature:
BLAST of DY259695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259695 ID=DY259695; Name=DY259695; organism=Citrus sinensis; type=EST; length=1275bpback to top |