DY257706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4B_XENLA (60S ribosomal protein L4-B (Fragment) OS=Xenopus laevis GN=rpl4-B PE=2 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 1.662e-91 Identity = 162/266 (60.90%), Postives = 204/266 (76.69%), Query Frame = 3 Query: 78 AAARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 A ARPL++V S +G+ + V +P V KA IRPDIV FVH+N+ KN+RQPYAVSK AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+L+M++GH+IE +PE+PLVV D ES +KT A+ +LK++ A+ D +K SQ +R GKGKMRNRR I R+GP V+Y+ E ++KAFRNIPG+ ++NV +L LL+LAPGG GRF +WT+SAF KLD++ Sbjct: 1 ACARPLISVYSEKGETS---GKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYN-ENNGIIKAFRNIPGITLLNVSKLNLLRLAPGGHVGRFCIWTESAFRKLDDL 262
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4_MACFA (60S ribosomal protein L4 OS=Macaca fascicularis GN=RPL4 PE=2 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 2.170e-91 Identity = 162/266 (60.90%), Postives = 202/266 (75.94%), Query Frame = 3 Query: 78 AAARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 A ARPL++V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+LVM++GH IE VPE+PLVV D E +KT A+ +LK++ A+ D +K SQ +R GKGKMRNRR I R+GP ++Y+ + ++KAFRNIPG+ ++NV +L +LKLAPGG GRF +WT+SAF KLDE+ Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHSIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4_PONAB (60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 3.702e-91 Identity = 162/266 (60.90%), Postives = 202/266 (75.94%), Query Frame = 3 Query: 78 AAARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 A ARPL++V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT A+ +LK++ A D +K SQ +R GKGKMRNRR I R+GP ++Y+ + ++KAFRNIPG+ ++NV +L +LKLAPGG GRF +WT+SAF KLDE+ Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKARNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDEL 263
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4_URECA (60S ribosomal protein L4 OS=Urechis caupo GN=RPL4 PE=2 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 1.407e-90 Identity = 161/265 (60.75%), Postives = 201/265 (75.85%), Query Frame = 3 Query: 81 AARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 AARPL+TV S D + S V LP V +A IRPDIV FVH + KN RQPYAVS+KAGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRG RMFAPTK WRRWHR++N Q+R+ P++VM++GH IE +PE+PLVVSDS ES++KT A+ VL+++ A+ D EK K+S+ R GKGK+RNRR I R+GPL++Y + + +AFRNIPG+ +VNV RL LL +APGG GRF +WT+SAF++LD I Sbjct: 2 AARPLITVHS---DKGAASESNVTLPAVFRAPIRPDIVNFVHFELKKNGRQPYAVSQKAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGRRMFAPTKTWRRWHRRVNTTQRRHALVSAIAATGIPAVVMSKGHCIEQIPEVPLVVSDSVESIKKTKEAVVVLRRLKAWPDVEKVKNSRRFRAGKGKLRNRRAIQRRGPLIIYGTDNG-ISRAFRNIPGITLVNVNRLNLLSMAPGGHVGRFCIWTESAFKQLDNI 262
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4_DICDI (60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 8.053e-90 Identity = 157/262 (59.92%), Postives = 193/262 (73.66%), Query Frame = 3 Query: 87 RPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVV-SDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLD 869 RP V V + + V LP+V+ IRPD+V FVH+N++KN+RQ Y + AG QTSAESWGTGRAV+RIPRVPG GTHR+GQGAFGNMCRGGRM+ P K WRRW+RK+NVNQKRY P+LVMARGH+I + E+PLV+ ++S ++++KT AA+++LK+I AYAD K DS+ IR G GK RNRRY RKGPLVV S + + +A RNIPGVEV NV RL LLKLAPGG GRFI+WTKSAFE+LD Sbjct: 4 RPFVQVFDAQNKVV----GKVKLPNVLTTPIRPDLVNFVHTNLNKNARQAYGAAPYAGEQTSAESWGTGRAVARIPRVPGSGTHRSGQGAFGNMCRGGRMYGPNKTWRRWNRKVNVNQKRYAVVSALAASAVPALVMARGHRINGINEVPLVIANESVDTLQKTKAAVELLKKINAYADVTKVIDSKHIRAGAGKARNRRYKVRKGPLVVVSGK-TTVSQALRNIPGVEVANVSRLNLLKLAPGGHLGRFIIWTKSAFEQLD 260 HSP 2 Score: 40.817 bits (94), Expect = 8.053e-90 Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 1 Query: 877 YGRLDKVSRRKKGYVLPRSKMATADLARIINSEE 978 +G K S +KKGY LPR +A AD+ R++NS+E Sbjct: 263 FGTFAKSSAQKKGYTLPRPMIANADIVRLVNSDE 296
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4_CANFA (60S ribosomal protein L4 OS=Canis familiaris GN=RPL4 PE=1 SV=2) HSP 1 Score: 330.872 bits (847), Expect = 9.117e-90 Identity = 159/266 (59.77%), Postives = 201/266 (75.56%), Query Frame = 3 Query: 78 AAARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 A ARPL++V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT A+ +LK++ A+ D +K SQ +R GKGKMRNRR I R+GP ++Y+ + ++KAFR PG+ ++NV +L +LKLAPGG GRF +WT+SAF KLD++ Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALACLSLPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRKHPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDDL 263
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4_DROME (60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2 SV=2) HSP 1 Score: 310.457 bits (794), Expect = 1.498e-88 Identity = 154/264 (58.33%), Postives = 198/264 (75.00%), Query Frame = 3 Query: 84 ARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 ARPLV+V + + + A D + + LP V KA IRPD+V VH + +N+RQ YAVS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK +RRWHRK+NVNQ+RY P+LV ++GH I+ V E PLVVSD + V+KT A+ L+++ +AD +K SQ R G+G MR+RR I+R+GPLVVY + L KAFRNIPG+E +NV++L LLKLAPGG GRF++WT+SAF +L+++ Sbjct: 6 ARPLVSVYTEKNEPAKDKN--ICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEG-LRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDL 266 HSP 2 Score: 38.5058 bits (88), Expect = 1.498e-88 Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = 1 Query: 877 YGRLDKVSRRKKGYVLPRSKMATADLARIINSEE 978 +G K S KKGY LP+ KMA DL+R++ SEE Sbjct: 267 FGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEE 300
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4B_YEAST (60S ribosomal protein L4-B OS=Saccharomyces cerevisiae GN=RPL4B PE=1 SV=2) HSP 1 Score: 315.849 bits (808), Expect = 5.663e-88 Identity = 157/264 (59.47%), Postives = 196/264 (74.24%), Query Frame = 3 Query: 84 ARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 +RP VTV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS+KAGHQTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMFAPTK WR+W+ K+N N+KRY SLV+ARGH++E +PE+PLVVS ES++KT A+ LK +GA++D K S+ +R GKGK RNRR+ R+GPLVVY AE +VKA RN+PGVE NV L LL+LAPG GRF++WT++AF KLD++ Sbjct: 2 SRPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVY-AEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQV 261 HSP 2 Score: 31.187 bits (69), Expect = 5.663e-88 Identity = 14/30 (46.67%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 889 DKVSRRKKGYVLPRSKMATADLARIINSEE 978 + V+ K GY LP ++T+D+ RIINS E Sbjct: 265 ETVASSKVGYTLPSHIISTSDVTRIINSSE 294
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4A_YEAST (60S ribosomal protein L4-A OS=Saccharomyces cerevisiae GN=RPL4A PE=1 SV=4) HSP 1 Score: 315.849 bits (808), Expect = 5.663e-88 Identity = 157/264 (59.47%), Postives = 196/264 (74.24%), Query Frame = 3 Query: 84 ARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 +RP VTV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS+KAGHQTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMFAPTK WR+W+ K+N N+KRY SLV+ARGH++E +PE+PLVVS ES++KT A+ LK +GA++D K S+ +R GKGK RNRR+ R+GPLVVY AE +VKA RN+PGVE NV L LL+LAPG GRF++WT++AF KLD++ Sbjct: 2 SRPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQRRGPLVVY-AEDNGIVKALRNVPGVETANVASLNLLQLAPGAHLGRFVIWTEAAFTKLDQV 261 HSP 2 Score: 31.187 bits (69), Expect = 5.663e-88 Identity = 14/30 (46.67%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 889 DKVSRRKKGYVLPRSKMATADLARIINSEE 978 + V+ K GY LP ++T+D+ RIINS E Sbjct: 265 ETVASSKVGYTLPSHIISTSDVTRIINSSE 294
BLAST of DY257706 vs. ExPASy Swiss-Prot
Match: RL4_TRYBB (60S ribosomal protein L4 OS=Trypanosoma brucei brucei GN=RPL4 PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 5.200e-83 Identity = 153/264 (57.95%), Postives = 189/264 (71.59%), Query Frame = 3 Query: 84 ARPLVTVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGIRPGKGKMRNRRYISRKGPLVVYSAEGAKLVKAFRNIPGVEVVNVERLTLLKLAPGGIFGRFIVWTKSAFEKLDEI 875 ARP V+V S D T LP V A IR D+V FVH+N++KNSRQPYAV++ +G + S ESWGTGRAV+RIPR+ GGGT +G GAFGNMCRGGRMFAPTKI+RRWHRKIN++QKR+ P+LVM+RGHKIE V E+PLVV D + EKT A+ LK +GA D + DS+ IR G+GKMRNRRY++R+GP++V K +AFRNI G+++ NV L LL LAPGG GRFI+WTKSAFEKLD+I Sbjct: 3 ARPSVSVYSASEDKVV---GTCSLPAVFTAPIRHDVVQFVHTNMAKNSRQPYAVNRLSGMKHSTESWGTGRAVARIPRIHGGGTSMSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSLPALVMSRGHKIENVAEVPLVVEDGVRAYEKTKEAMTFLKTVGAIDDVNRVNDSRQIRAGRGKMRNRRYVARRGPMLVMPDN--KGTRAFRNIFGLDLANVNSLNLLHLAPGGHVGRFIIWTKSAFEKLDKI 261 HSP 2 Score: 29.6462 bits (65), Expect = 5.200e-83 Identity = 12/36 (33.33%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 871 RFYGRLDKVSRRKKGYVLPRSKMATADLARIINSEE 978 + +G + S K G++LP + + D+ RI+ SEE Sbjct: 260 KIFGTFTEPSTVKSGFMLPAPMLTSTDVTRIMQSEE 295 The following BLAST results are available for this feature:
BLAST of DY257706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257706 ID=DY257706; Name=DY257706; organism=Citrus sinensis; type=EST; length=1182bpback to top |