EY702525

Overview
NameEY702525
Unique NameEY702525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_GUITH (Elongation factor Tu, chloroplastic OS=Guillardia theta GN=tufA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +D    ER RGITI+ A  ++ET ++Y A +D PGH D++KNMITG +Q D A+L+  + +G          QTREH LLA
Sbjct:   49 IDSAPEERARGITINTAHVEYETDKWYYAHVDCPGHADYVKNMITGAAQMDGAILVCSAANGPMP-------QTREHILLA 122          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_DESHY (Elongation factor Tu OS=Desulfitobacterium hafniense (strain Y51) GN=tuf PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +DK   ERERGITI  +  ++ET   + A +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA
Sbjct:   50 IDKAPEERERGITISTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_DESHD (Elongation factor Tu OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=tuf PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +DK   ERERGITI  +  ++ET   + A +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA
Sbjct:   50 IDKAPEERERGITISTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_DESAD (Elongation factor Tu OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=tuf PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 39/81 (48.15%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +DK   E+ERGITI  A  ++ET   + A +D PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA
Sbjct:   50 IDKAPEEKERGITIATAHVEYETEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_CLOD6 (Elongation factor Tu OS=Clostridium difficile (strain 630) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +DK   ERERGITI  A  ++ET   + A +D PGH D++KNMITG +Q D A+L+  +T G          QTREH LL+
Sbjct:   51 IDKAPEERERGITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSATDGPMP-------QTREHILLS 124          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_ARCB4 (Elongation factor Tu OS=Arcobacter butzleri (strain RM4018) GN=tuf PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +D    ERERGITI  +  ++ET + + A +D PGH D++KNMITG +Q D A+L+I ST G          QTREH LL+
Sbjct:   50 IDNAPEERERGITIATSHIEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGAILVIASTDGPM-------AQTREHILLS 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_APPPP (Elongation factor Tu OS=Apple proliferation phytoplasma GN=tuf PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +DK K E+ERGITI+     +ET + + A +D PGH D++KNMITG +Q D  +L++ +  G          QTREH LLA
Sbjct:   50 IDKTKEEKERGITINTTHVSYETVKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVSAYHGVMP-------QTREHVLLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU2_RHORT (Elongation factor Tu 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 2
Query:  215 KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            K  AE    +F+    +DK   ER RGITI  A  ++ET   + A +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA
Sbjct:   34 KVLAEAGGATFQAYDQIDKAPEERARGITISTAHVEYETEARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU2_CARHZ (Elongation factor Tu 2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +D    ERERGITI+ A  ++ET + + A +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA
Sbjct:   50 IDNAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU1_RHORT (Elongation factor Tu 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 2
Query:  215 KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            K  AE    +F+    +DK   ER RGITI  A  ++ET   + A +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA
Sbjct:   34 KVLAEAGGATFQAYDQIDKAPEERARGITISTAHVEYETEARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLA 123          
The following BLAST results are available for this feature:
BLAST of EY702525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_GUITH1.588e-1245.68Elongation factor Tu, chloroplastic OS=Guillardia ... [more]
EFTU_DESHY1.588e-1245.68Elongation factor Tu OS=Desulfitobacterium hafnien... [more]
EFTU_DESHD1.588e-1245.68Elongation factor Tu OS=Desulfitobacterium hafnien... [more]
EFTU_DESAD1.588e-1248.15Elongation factor Tu OS=Desulfovibrio salexigens (... [more]
EFTU_CLOD61.588e-1246.91Elongation factor Tu OS=Clostridium difficile (str... [more]
EFTU_ARCB41.588e-1246.91Elongation factor Tu OS=Arcobacter butzleri (strai... [more]
EFTU_APPPP1.588e-1244.44Elongation factor Tu OS=Apple proliferation phytop... [more]
EFTU2_RHORT1.588e-1242.27Elongation factor Tu 2 OS=Rhodospirillum rubrum (s... [more]
EFTU2_CARHZ1.588e-1245.68Elongation factor Tu 2 OS=Carboxydothermus hydroge... [more]
EFTU1_RHORT1.588e-1242.27Elongation factor Tu 1 OS=Rhodospirillum rubrum (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702525 ID=EY702525; Name=EY702525; organism=Citrus sinensis; type=EST; length=837bp
CCCTCGCGTCCGCAGCTTCTGCTAGTCGGCGAGAGAGAAACCTTTTAGCA
AATTTCATATCAAGGGTTTATACTAGATTTGCATAATGGGTAAGGAGAAG
ACTCACATCAACATTGTGGTCATCGGCCATGGCGGCTCTGGAAAGTCGAC
CACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGA
TCGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAA
TACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTAC
CATTGATATTGCCTTGTGGAAGTTCGAGACCACCAGGTACTACTGCGCCG
GCATTGATGCTCCTGGACATCGTGACTTTATCAAGAACATGATTACCGGT
ACCTCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCAGCGGTGG
TTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGC
TTGCTTTCACCCCTTGGTGTGAAGCAGATGATTTGCTGCTGGAACAAGAT
GGACGCCCCCACCCCTAAGTACTCAAAGGCTAGGTACCATGAAATTGTGA
AGGAAGTCTCTTCCTACCTGAAGAAGGGTGGATACCACCCCGAGAAAGTC
CCATTTGTGCCCATCTCTCGGTTCCGAGGGTGACAACATGATTGAGAGGT
CTACCAACCTTGACTGGGACCAGGGTCCAACCCTGCTGGATGCTCTTGCA
ATACTCATGAAGCGAAAGGGCCCTCGACAAAGCCCTTCGTCTGCACTTCA
GGGACGGAACAACATGGGGGGAATCGGACTGCCCAGC
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