EY702525

Overview
NameEY702525
Unique NameEY702525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_EXIS2 (Elongation factor Tu OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=tuf PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +D    ERERGITI  A  ++ET + + A +D PGH D++KNMITG +Q D A+L++ +T G          QTREH LL+
Sbjct:   50 IDGAPEERERGITIATAHIEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMP-------QTREHILLS 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_DESVM (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tuf PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +DK   E+ERGITI  A  ++ET   + A +D PGH D+IKNMITG +Q D  +L++ +T G          QTREH LLA
Sbjct:   50 IDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP4 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=tuf PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +D    E+ RGITI+ A  ++ETT+ + A +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA
Sbjct:   50 IDAAPEEKARGITINTAHVEYETTQRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAMP-------QTKEHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_CLOPS (Elongation factor Tu OS=Clostridium perfringens (strain SM101 / Type A) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  242 SFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +FKY  + DK   E+ERGITI+ A  ++ET   + A +D PGH D++KNMITG +Q D A+L+  +  G          QTREH LL+
Sbjct:   44 AFKYDEI-DKAPEEKERGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMP-------QTREHILLS 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_CLOPE (Elongation factor Tu OS=Clostridium perfringens GN=tufA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  242 SFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +FKY  + DK   E+ERGITI+ A  ++ET   + A +D PGH D++KNMITG +Q D A+L+  +  G          QTREH LL+
Sbjct:   44 AFKYDEI-DKAPEEKERGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMP-------QTREHILLS 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_CLOP1 (Elongation factor Tu OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  242 SFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +FKY  + DK   E+ERGITI+ A  ++ET   + A +D PGH D++KNMITG +Q D A+L+  +  G          QTREH LL+
Sbjct:   44 AFKYDEI-DKAPEEKERGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMP-------QTREHILLS 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_CLONN (Elongation factor Tu OS=Clostridium novyi (strain NT) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +DK   E+ERGITI+ +  ++ET   + A +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA
Sbjct:   50 IDKAPEEKERGITINTSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_CLOK5 (Elongation factor Tu OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  263 LDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            +DK   E+ERGITI+ A  ++ET   + A +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA
Sbjct:   50 IDKAPEEKERGITINTAHVEYETEVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: EFTU_ASTLO (Elongation factor Tu, plastid OS=Astasia longa GN=tufA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 2
Query:  233 NKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            N +S KY  + D    E+ RGITI+ A  ++ET   + A +D PGH D+IKNMITG +Q D A+L+I +T G          QT+EH LLA
Sbjct:   41 NTKSKKYEEI-DSSPEEKARGITINTAHVEYETKNRHYAHVDCPGHADYIKNMITGAAQMDGAILVISATDGPMP-------QTKEHILLA 123          
BLAST of EY702525 vs. ExPASy Swiss-Prot
Match: NODQ_RHITR (Bifunctional enzyme nodQ OS=Rhizobium tropici GN=nodQ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 2
Query:  233 NKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAGIDAPGHRDFIKNMITGTSQADCAVLIIDSTSGGFEAGISKDGQTREHALLA 505
            N     ++ VLD L+AERE+GITID+A   F T++      D PGH ++ +NM TG S AD AV+++DS  G  +       QTR H+ LA
Sbjct:   68 NGEEIDFSLVLDGLEAEREQGITIDVAYRYFSTSKRKFIVADTPGHFEYTRNMATGASTADLAVILVDSRQGILQ-------QTRRHSYLA 151          
The following BLAST results are available for this feature:
BLAST of EY702525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_EXIS23.537e-1245.68Elongation factor Tu OS=Exiguobacterium sibiricum ... [more]
EFTU_DESVM3.537e-1246.91Elongation factor Tu OS=Desulfovibrio vulgaris (st... [more]
EFTU_CYAP43.537e-1244.44Elongation factor Tu OS=Cyanothece sp. (strain PCC... [more]
EFTU_CLOPS3.537e-1244.32Elongation factor Tu OS=Clostridium perfringens (s... [more]
EFTU_CLOPE3.537e-1244.32Elongation factor Tu OS=Clostridium perfringens GN... [more]
EFTU_CLOP13.537e-1244.32Elongation factor Tu OS=Clostridium perfringens (s... [more]
EFTU_CLONN3.537e-1244.44Elongation factor Tu OS=Clostridium novyi (strain ... [more]
EFTU_CLOK53.537e-1245.68Elongation factor Tu OS=Clostridium kluyveri (stra... [more]
EFTU_ASTLO3.537e-1245.05Elongation factor Tu, plastid OS=Astasia longa GN=... [more]
NODQ_RHITR4.619e-1242.86Bifunctional enzyme nodQ OS=Rhizobium tropici GN=n... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-009-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702525 ID=EY702525; Name=EY702525; organism=Citrus sinensis; type=EST; length=837bp
CCCTCGCGTCCGCAGCTTCTGCTAGTCGGCGAGAGAGAAACCTTTTAGCA
AATTTCATATCAAGGGTTTATACTAGATTTGCATAATGGGTAAGGAGAAG
ACTCACATCAACATTGTGGTCATCGGCCATGGCGGCTCTGGAAAGTCGAC
CACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGA
TCGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAA
TACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTAC
CATTGATATTGCCTTGTGGAAGTTCGAGACCACCAGGTACTACTGCGCCG
GCATTGATGCTCCTGGACATCGTGACTTTATCAAGAACATGATTACCGGT
ACCTCACAGGCTGACTGTGCCGTCCTCATCATTGACTCCACCAGCGGTGG
TTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGC
TTGCTTTCACCCCTTGGTGTGAAGCAGATGATTTGCTGCTGGAACAAGAT
GGACGCCCCCACCCCTAAGTACTCAAAGGCTAGGTACCATGAAATTGTGA
AGGAAGTCTCTTCCTACCTGAAGAAGGGTGGATACCACCCCGAGAAAGTC
CCATTTGTGCCCATCTCTCGGTTCCGAGGGTGACAACATGATTGAGAGGT
CTACCAACCTTGACTGGGACCAGGGTCCAACCCTGCTGGATGCTCTTGCA
ATACTCATGAAGCGAAAGGGCCCTCGACAAAGCCCTTCGTCTGCACTTCA
GGGACGGAACAACATGGGGGGAATCGGACTGCCCAGC
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