EY702524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_NANEQ (30S ribosomal protein S4e OS=Nanoarchaeum equitans GN=rps4e PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21 Identity = 73/226 (32.30%), Postives = 111/226 (49.12%), Query Frame = 2 Query: 74 LKKHLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK-VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFENIHIPDALGHEFATRLGDGFPI 745 +K+HL+ L P+ W + K G + KPS GPH +P+ + LR+ L A REV +L VLVDG+ D +P G DV++IP+ NE +R+L D +G+ L + EEA K K +R V I Y T DGRT D K + + ++ KI + I + + G++ GR+G+I+ K + NI + G T L + P+ Sbjct: 5 IKRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRGKHTGRIGVIKEVIKTDMPWPNIVRLEVAGEVGETWLDNIIPV 228
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4_BIGNA (40S ribosomal protein S4 OS=Bigelowiella natans GN=RPS4 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.152e-21 Identity = 59/224 (26.34%), Postives = 109/224 (48.66%), Query Frame = 2 Query: 62 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFENIHIPDALGHEFATRLGD 733 MA+G+KKH KR+++ K G F K SSGPH + + L+ +++ A +E ++ + V+GK +P MD +S P N+++R+L G+ ++ + E K+CKV + I T D R ++ IK D++ + ++I +KF+VG++ ++T G++ G + +I+ K K + IH+ G + + D Sbjct: 1 MAKGIKKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSD 224
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_SULAC (30S ribosomal protein S4e OS=Sulfolobus acidocaldarius GN=rps4e PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.049e-20 Identity = 70/226 (30.97%), Postives = 107/226 (47.35%), Query Frame = 2 Query: 83 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI--------RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRN---RGRVGIIQNRGKHKGRFENIHIPDALGHEFATRL 727 H+ R AP + K + + +GPHK +E +PL ++L+ LK T RE I+ VLVDGKVR D YP G MDVV IP + R++ D ++ E+AK+K ++ + + G+ +N DGR I +Y P + T+K++L E KIT G M+ GRN G++ IQ + ++ + + G F T L Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTL---TTLKIELPEQKITTAYTIKEGVYAMIIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNL 225
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_SULTO (30S ribosomal protein S4e OS=Sulfolobus tokodaii GN=rps4e PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20 Identity = 65/223 (29.15%), Postives = 108/223 (48.43%), Query Frame = 2 Query: 83 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQ--NRGKHKGR-FENIHIPDALGHEFATRL 727 H+ R AP L K + + + GPHK E +PL L+L++ L A T RE ++++ ++VDG+VR D +P G MDV+SIP ++ FR++ D + E+AK+K ++ + + G +N DGR I P + + T+K+++ I + G ++ GRN G G+I+ K+K R + + I G T L Sbjct: 3 HITRFEAPWFLNLSKKEYKWTIRANPGPHKLSESIPLALLLKHYLNVAETTREAKRLVVEGKIMVDGRVRKDYKFPVGLMDVISIPSSDLYFRIVPDNIKYLMPVKISKEDAKYKFVRIVNKTTNKNGNIQLNLEDGRNILIPKEKVPEMNYPTLTTLKIEIPSQNIIKSYELSEGKYAIIIGGRNVGLHGVIKTIQYAKYKKRKYSIVTIEQKNGESVQTNL 225
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_METS5 (30S ribosomal protein S4e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps4e PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.858e-18 Identity = 69/237 (29.11%), Postives = 108/237 (45.57%), Query Frame = 2 Query: 83 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP-----LIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVG---IIQNRGKHKGRFENIHIPDALGHEFATRLGDGFPIRKGSKPGV 769 H+ RL AP K + + S GPH + +PL L+LR+ L + + +E I+ VLVDG+VR D YP G MDV++IP + R++ D + + +EE+KFKL ++ + + G+ N DGR + + T+K+ + +I F VM G+N G +G IQ R+ + I G E+ T L + I + KP V Sbjct: 3 HITRLEAPWFLRASKKEYKWTVRASPGPHPLGKSIPLGLLLRDYLAFTSSLKESKKIISDGKVLVDGRVRRDYKYPVGLMDVIAIPHADLYLRIVPDRARLLKPVKISEEESKFKLVRLLNKTLVKGGLLQFNLEDGRNLLISKESTEMFKLPTLTTLKISIPNQEILGVYGFKENVYVMAVGGKNAGIIGQLKRIQTSPYKTRRYSIVVIRSPDGSEYETNLENAMVIGE-EKPEV 238
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_HALSA (30S ribosomal protein S4e OS=Halobacterium salinarium GN=rps4e PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.367e-18 Identity = 58/212 (27.36%), Postives = 97/212 (45.75%), Query Frame = 2 Query: 74 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFEN-IHIPDALG 706 + H KRL+ PK W +++ F K +GPH +PL++VLR+ L+Y E + VLV+G D P G D+++ P +E +R+ D GR L + + A KL KV G +N +DG + + D++ +D + N+I +++ G +V G++ G +G I G N + + D G Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAVAGQHAGDIGEIAEINVQPGSASNTVRVDDENG 211
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_HALS3 (30S ribosomal protein S4e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps4e PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.367e-18 Identity = 58/212 (27.36%), Postives = 97/212 (45.75%), Query Frame = 2 Query: 74 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFEN-IHIPDALG 706 + H KRL+ PK W +++ F K +GPH +PL++VLR+ L+Y E + VLV+G D P G D+++ P +E +R+ D GR L + + A KL KV G +N +DG + + D++ +D + N+I +++ G +V G++ G +G I G N + + D G Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAVAGQHAGDIGEIAEINVQPGSASNTVRVDDENG 211
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_NATPD (30S ribosomal protein S4e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps4e PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.086e-17 Identity = 59/210 (28.10%), Postives = 100/210 (47.62%), Query Frame = 2 Query: 74 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFENIHIPDA 700 + H KRL PK W +++ A+ K ++GPH E +PL++VLR+ L Y + +E L Q +L++G +D P G D+++ + E +R+ D GR L + ++ A KL K+ G ++ +DG T+ D ND+I + + +I ++ G +V G + GR+G I G N + DA Sbjct: 1 MTNHQKRLAVPKSWPVERKEEAYTTKAAAGPH-GEEGVPLLIVLRDVLGYVDSKKEARYALEQDSILINGTAVSDERRPVGMFDILAFDEREEYYRIFPDEGGRLSLTPIDEDAAGSKLGKIVGKTQVAGGDTQLSLHDGETLLVEDATAYDTNDSIVVSNDGEEIVAHFTYEEGALVTAVSGAHAGRIGTIDEIQVTPGSSANNVLIDA 209
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_HALMA (30S ribosomal protein S4E OS=Haloarcula marismortui GN=rps4e PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 2.419e-17 Identity = 56/204 (27.45%), Postives = 99/204 (48.53%), Query Frame = 2 Query: 74 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT-IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFEN 682 + H KRL+ P W +++ F K +GPH +PL++VLR+ L YA +E L + +VL++GK +D P G D+++ + E +R+ GR L ++ + A+ KL K+ + G + +DG T I D A D+I + E+ ++ +++ G +V G + G VG ++ G +N Sbjct: 1 MSNHQKRLSVPNSWPVERKTATFTVKAGAGPH-GESGVPLLIVLRDVLGYADNRKEARYALNEDNVLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIVTKTHVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEVVAHFEYEEGALVTAVDGAHAGEVGEVEEIQVTPGSAQN 203
BLAST of EY702524 vs. ExPASy Swiss-Prot
Match: RS4E_THEAC (30S ribosomal protein S4e OS=Thermoplasma acidophilum GN=rps4e PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17 Identity = 59/199 (29.65%), Postives = 92/199 (46.23%), Query Frame = 2 Query: 89 KRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDTTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTWGRNRGRVGIIQNRGKHKGRFENI 685 KRL + + + + P P+ G H + + L+ ++R+ LK + RE IL V VDGK + + GFMDV+ I E++R++Y+ +G L E A KL KVRS + T+DGRT D K D + + + KI++ IK GN +T G + + G I +G N+ Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSANL 202 The following BLAST results are available for this feature:
BLAST of EY702524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702524 ID=EY702524; Name=EY702524; organism=Citrus sinensis; type=EST; length=904bpback to top |