EY702519

Overview
NameEY702519
Unique NameEY702519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702519 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.106e-20
Identity = 59/157 (37.58%), Postives = 80/157 (50.96%), Query Frame = 3
Query:  171 AIWQEGCVAINDPKDGLFLNGKFCKDPKLARAEDFFFSGLGKPGNTSNRLGVDETHANVEQIPGLNTLGISAFRIDYAPYGPTPPHIHPRATEIFLVLQGTLYGGFVTSHQLNNTLIAKVLNKGDALVFPQVRFHFPSNTGKTNAAPYSAPNTQLPG 641
            A+ Q+ CVA N P      +G  C+      A DF+   L +PG            A V+Q P +N LGISA R+D  P G  P H HP  +E+  VL G L  GF++S   +N +  K ++KG   VFPQ   HF  NTG T A  ++A ++  PG
Sbjct:   26 ALTQDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPG 179          
BLAST of EY702519 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.298e-20
Identity = 58/136 (42.65%), Postives = 75/136 (55.15%), Query Frame = 3
Query:  189 CVAINDPKDGLFLNGKFCKDPKLARAEDFFFSGLGKPGNTSNRLGVDETHANVEQIPGLNTLGISAFRIDYAPYGPTPPHIHPRATEIFLVLQGTLYGGFVTSHQLNNTLIAKVLNKGDALVFPQVRFHFPSNTGK 596
            CVA N P      +G  CK+     A DF +SGL KPGNT+N +    T A V Q PG+  LG++  R+D AP G  P H HP A+EI  V++GT+   F++S    N +  K L  GD +VFPQ    F   TGK
Sbjct:   28 CVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPGDVMVFPQGLLDFQEITGK 159          
BLAST of EY702519 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 57/154 (37.01%), Postives = 73/154 (47.40%), Query Frame = 3
Query:  180 QEGCVAINDPKDGLFLNGKFCKDPKLARAEDFFFSGLGKPGNTSNRLGVDETHANVEQIPGLNTLGISAFRIDYAPYGPTPPHIHPRATEIFLVLQGTLYGGFVTSHQLNNTLIAKVLNKGDALVFPQVRFHFPSNTGKTNAAPYSAPNTQLPG 641
            Q+ C      +  LF+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRA+E+  V  G++  GF  +      L  K L +GD  +FP+   HF  N G   A  +S  N+Q PG
Sbjct:   29 QDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPG 179          
BLAST of EY702519 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17
Identity = 61/145 (42.07%), Postives = 79/145 (54.48%), Query Frame = 3
Query:  225 LNGKFCKDPKLARAEDFFFSGLGKPGNTSNRL-GVDETHAN-VEQIPGLNTLGISAFRIDYAPYGPTPPHIHPRATEIFLVLQGTLYGGFV-TSHQLNNTLIAKVLNKGDALVFPQVRFHFPSNTGKTNAAP---YSAPNTQLPG 641
            LNG  C DP LARA+ F  S L +  N +  L G + T  +    +PG N  G++  RID AP G  PPH HPRA+E  LVL G++  GF  TS++    L  ++L  G+A VFP+   HF  N     AAP    S  N+Q PG
Sbjct:   46 LNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTSYR----LYTQLLRAGEAFVFPRAMVHFLYN--MDTAAPAVVLSGLNSQSPG 184          
BLAST of EY702519 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.183e-11
Identity = 46/128 (35.94%), Postives = 63/128 (49.22%), Query Frame = 3
Query:  270 DFF-FSGLGKPGNTSNRLGVDE---THANVEQIPGLNTLGISAFRIDYAPYGPTPPHIHPRATEIFLVLQGTLYGGFVTSHQLNNTLIAKVLNKGDALVFPQVRFHFPSNTGKTNAAPYSAPNTQLPG 641
            DFF F+G  K  NTS+    +    T A + + P LN   +S   + + P    PPH HPR+ E+ LV+ G L  GF+ +    N L  + L  GD  VFP+   HF  N+G   A   SA  +  PG
Sbjct:   48 DFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPG 172          
The following BLAST results are available for this feature:
BLAST of EY702519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GL813_ORYSJ3.106e-2037.58Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GLP1_IPONI5.298e-2042.65Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL111_ORYSJ5.858e-1937.01Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL31_ORYSJ7.161e-1742.07Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL92_ORYSJ1.183e-1135.94Putative germin-like protein 9-2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702519 ID=EY702519; Name=EY702519; organism=Citrus sinensis; type=EST; length=922bp
AAGGCAACACATGGCACCCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTGAGATACGCACATCCTGTGACTTAATCACCATGAAG
GTAATTCACTTTCTTATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCTTT
GGCCTCTGCCACTGACCCTGGCCATCTGGCAAGAGGGGTGTGTAGCCATC
AATGACCCCAAGGATGGTCTGTTCCTCAATGGGAAGTTCTGCAAGGACCC
CAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTG
GAAACACATCAAATCGACTTGGTGTTGATGAAACACATGCAAATGTTGAG
CAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCCGGATTGACTA
TGCACCATATGGCCCAACGCCACCTCACATTCACCCCCGTGCCACCGAAA
TCTTCTTAGTCCTGCAAGGAACTCTTTATGGCGGCTTTGTGACATCACAC
CAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGAGATGCCCT
CGTGTTTCCACAAGTTAGATTCCACTTCCCATCCAACACTGGAAAAACAA
ATGCAGCTCCCTATTCTGCTCCAAACACCCAACTCCCGGGTGAAACTACG
CATAGGCGAAAGAAGCCTGTGAAGCCAAACCTTTAACCCACCCCGAATCT
CCTCGGGAAGGCACTCCGCGTGGCCCCCAGGATAGCGGAACATCCTTCAG
GAAACTCCCCCACCGGCCATTAGGAACAAGCATCACCGACCTCTCAGGAA
CACTGACCCCCTCCCTCACCGGTCCGTCTACCTTACTCCCCCACGATCTC
ATCTCACTCAACGGACACCACAACGCCCCCCCTTCACCTCCCCTCCCCCC
TACCGCTCCCACCTCAACAACA
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