DY257635

Overview
NameDY257635
Unique NameDY257635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.592e-24
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 3
Query:   99 NLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 542
            ++ +R+ +E + LL    PGI+A P  DN+  +   + GP  + YE   +KL L  P DYP   P V+F T  +HPN+D+ G ICLDILK+ W+ +  +RT+LLS+Q+LL  PN   PL+   A  W +++TE  +   E  +   SD
Sbjct:   30 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 176          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.080e-24
Identity = 55/159 (34.59%), Postives = 93/159 (58.49%), Query Frame = 3
Query:   60 ISVKSLGIPMASGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            ++  S  +   S  + +++ +E   L ++P  GI     ++++      I GP+ +PYEGG+FK++L L +D+P + PK  FLTKI+HPN+ K G IC++ LK  W P L I+ VLL+++ LL  PNP+  L++   K       +  + AK +T ++A
Sbjct:    1 MATTSSNVENFSPQIIKQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPTGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHA 159          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.080e-24
Identity = 61/146 (41.78%), Postives = 91/146 (62.33%), Query Frame = 3
Query:  111 RIVKETQRLLSEPA--PGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVET-AKEWTRLYA 536
            R+ KE + +  E    P I     + N+  +  +I GPS++PYEGGVF+L   +PE YP+  P+VRFLTKI+HPN+  K G ICLDILK+ WSPA  +++V  +I AL++ P PD PL+ +     ++ +     + A+ +TRL A
Sbjct:    7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAA 152          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.633e-24
Identity = 58/149 (38.93%), Postives = 87/149 (58.39%), Query Frame = 3
Query:   99 NLPRRIV----KETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLY 533
            NLP  I+    KE   L ++P  GI   P E+++    V I GP  +PY GG+F+++L L +D+P S PK  FLTKI+HPN+   G IC+++LK  W+  L IR VLL+I+ LL  PNP+  L++   +    +  E    A+  T ++
Sbjct:    7 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.633e-24
Identity = 58/149 (38.93%), Postives = 87/149 (58.39%), Query Frame = 3
Query:   99 NLPRRIV----KETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLY 533
            NLP  I+    KE   L ++P  GI   P E+++    V I GP  +PY GG+F+++L L +D+P S PK  FLTKI+HPN+   G IC+++LK  W+  L IR VLL+I+ LL  PNP+  L++   +    +  E    A+  T ++
Sbjct:    7 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.633e-24
Identity = 66/161 (40.99%), Postives = 88/161 (54.66%), Query Frame = 3
Query:   93 SGNLPRRIVKETQRLLSEPAPGIS------ASPAEDNMRYFNVM---ILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL----KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            +  L  R+ KE + LLS+P  G S      A+    +   F+ +   I GP  + Y  G+F L++ +PE YP   P V F T IYHPNID  GRICLDIL    K  W P+L I TVL S++ LLS PNPDD L   +++ +K +       A+E T  YA
Sbjct:    4 AARLSLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.633e-24
Identity = 58/149 (38.93%), Postives = 87/149 (58.39%), Query Frame = 3
Query:   99 NLPRRIV----KETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLY 533
            NLP  I+    KE   L ++P  GI   P E+++    V I GP  +PY GG+F+++L L +D+P S PK  FLTKI+HPN+   G IC+++LK  W+  L IR VLL+I+ LL  PNP+  L++   +    +  E    A+  T ++
Sbjct:    7 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23
Identity = 51/137 (37.23%), Postives = 82/137 (59.85%), Query Frame = 3
Query:  120 KETQRLLSEPAPGISASPAEDNMRY-FNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKAD 488
            ++   L   P  G SA   +DN  Y + V+I+GP  + YEGGVFK  L  P+DYP+  PK++F+T+I+HPN+DK G +C+ IL             +++W P   + T+++S+ ++L+ PN D P + + AK W+ D
Sbjct:   12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 148          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23
Identity = 51/137 (37.23%), Postives = 82/137 (59.85%), Query Frame = 3
Query:  120 KETQRLLSEPAPGISASPAEDNMRY-FNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKAD 488
            ++   L   P  G SA   +DN  Y + V+I+GP  + YEGGVFK  L  P+DYP+  PK++F+T+I+HPN+DK G +C+ IL             +++W P   + T+++S+ ++L+ PN D P + + AK W+ D
Sbjct:   12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 148          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23
Identity = 51/137 (37.23%), Postives = 82/137 (59.85%), Query Frame = 3
Query:  120 KETQRLLSEPAPGISASPAEDNMRY-FNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKAD 488
            ++   L   P  G SA   +DN  Y + V+I+GP  + YEGGVFK  L  P+DYP+  PK++F+T+I+HPN+DK G +C+ IL             +++W P   + T+++S+ ++L+ PN D P + + AK W+ D
Sbjct:   12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 148          
The following BLAST results are available for this feature:
BLAST of DY257635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBE2C_SPISO1.592e-2439.19Ubiquitin-conjugating enzyme E2 C OS=Spisula solid... [more]
UBE2S_NEMVE2.080e-2434.59Ubiquitin-conjugating enzyme E2 S OS=Nematostella ... [more]
UBC21_ARATH2.080e-2441.78Probable ubiquitin carrier protein E2 21 OS=Arabid... [more]
UBE2S_RAT4.633e-2438.93Ubiquitin-conjugating enzyme E2 S OS=Rattus norveg... [more]
UBE2S_MOUSE4.633e-2438.93Ubiquitin-conjugating enzyme E2 S OS=Mus musculus ... [more]
UBC37_ARATH4.633e-2440.99Probable ubiquitin carrier protein E2 37 OS=Arabid... [more]
UB2SA_XENLA4.633e-2438.93Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus lae... [more]
UB2G1_RAT1.761e-2337.23Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norve... [more]
UB2G1_MOUSE1.761e-2337.23Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus... [more]
UB2G1_HUMAN1.761e-2337.23Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CE01FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257635 ID=DY257635; Name=DY257635; organism=Citrus sinensis; type=EST; length=669bp
ACGAGAAACCTAAAGAGGAAAAGAGGGAGAGGGAAAAAAAGACGATCGAT
TTCTGACTCATCTCTGTAAAATCTCTTGGAATTCCGATGGCTAGTGGCAA
CCTCCCTCGCAGAATTGTCAAGGAAACCCAGCGGCTGCTCAGTGAACCAG
CTCCAGGCATTAGTGCTTCTCCTGCCGAAGACAACATGCGATATTTTAAT
GTAATGATTCTTGGTCCATCTCAGTCTCCTTATGAAGGTGGGGTTTTCAA
GTTGGAGTTGTTTTTGCCTGAAGATTATCCAATGTCCGCTCCTAAGGTTC
GATTTCTGACCAAAATATATCATCCTAACATAGACAAGCTTGGAAGGATA
TGCCTTGATATTTTGAAAGATAAATGGAGTCCCGCCCTGCAAATCCGCAC
AGTCCTGCTGAGTATCCAAGCTCTTTTGAGTGCTCCGAACCCAGACGATC
CACTTTCTGATAACATTGCAAAGCATTGGAAGGCAGATGAGACTGAAGCT
GTTGAAACTGCGAAGGAATGGACCCGGTTATATGCAAGTGATGGGTGAAG
GCTAGAGCTTGTTCGAGGATATTTCTCTACAAGTTTATGTTAAAAACACT
AATTGATGTATGAACAGATGTGTAAAAATGTTTCTCAATCGGTCTGTTAT
TTGAATGTTCCACTTGTAT
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