DY257635

Overview
NameDY257635
Unique NameDY257635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 61/159 (38.36%), Postives = 85/159 (53.46%), Query Frame = 3
Query:  111 RIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKV---------------RFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 539
            R  KE          GI     E+N+      I GP  +PY GG F++++ +PE YP   PKV               +F+T+I+HPNI  + G ICLDILKDKW+ +L +RTVLLS+QA+L +P P DP    +AK +  +      TA  WT  +A+
Sbjct:   25 RKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFAN 183          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.003e-23
Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 3
Query:   72 SLGIPMASGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            S  +   S  + R++ KE   L + P  G+   P E ++      I GP  +PYEGG FK++L L +D+P + PK  FLTKI+HPN+ K G IC++ LK  W   L ++ +LL+I+ LL  PNP+  L++   K          E A+  T ++A
Sbjct:    4 SSNVENLSPQIIRQVAKEVLDLANHPPEGVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNPESALNEEAGKLLLEQYDNYSERARMMTEIHA 158          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.003e-23
Identity = 51/137 (37.23%), Postives = 81/137 (59.12%), Query Frame = 3
Query:  120 KETQRLLSEPAPGISASPAEDNMRY-FNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKD-------------KWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKAD 488
            ++   L   P  G SA   +DN  Y + V+I+GP  + YEGGVFK  L  P+DYP+  PK++F+T+I+HPN+DK G +C+ IL +             +W P   + T+++S+ ++L+ PN D P + + AK W+ D
Sbjct:   12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 148          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_DROGR (Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi GN=GH12079 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.490e-22
Identity = 52/143 (36.36%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            R+++KE Q + S P  GI     E ++     +I GP+ +PY  G+F+++L L +D+P + PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L++   K       +  + A+  T ++A
Sbjct:   17 RQVMKELQDMESTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22
Identity = 50/143 (34.97%), Postives = 85/143 (59.44%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            R++++E Q + + P  GI     E ++     +I GP+ +PY  G+F+++L L +D+P++ PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L++   K       +  + A+  T ++A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22
Identity = 50/143 (34.97%), Postives = 85/143 (59.44%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            R++++E Q + + P  GI     E ++     +I GP+ +PY  G+F+++L L +D+P++ PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L++   K       +  + A+  T ++A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22
Identity = 50/143 (34.97%), Postives = 85/143 (59.44%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            R++++E Q + + P  GI     E ++     +I GP+ +PY  G+F+++L L +D+P++ PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L++   K       +  + A+  T ++A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.542e-22
Identity = 51/143 (35.66%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            R++++E Q + + P  GI     E ++     +I GP+ +PY  GVF+++L L +D+P + PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L++   K       +  + A+  T ++A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_DROER (Ubiquitin-conjugating enzyme E2 S OS=Drosophila erecta GN=GG18165 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.542e-22
Identity = 51/143 (35.66%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            R++++E Q + + P  GI     E ++     +I GP+ +PY  GVF+++L L +D+P + PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L++   K       +  + A+  T ++A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2S_DROAN (Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae GN=GF21161 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.320e-22
Identity = 50/143 (34.97%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            R++++E Q + + P  GI     E ++     +I GP+ +PY  G+F+++L L +D+P + PK  FLTKI+HPN+   G IC++ LK  W P L I+ +LL+I+ LL  PNP+  L++   K       +  + A+  T ++A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
The following BLAST results are available for this feature:
BLAST of DY257635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBC21_CAEEL2.299e-2338.36Probable ubiquitin-conjugating enzyme E2 21 OS=Cae... [more]
UBE2S_BRAFL3.003e-2336.13Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma... [more]
UB2G1_MACFA3.003e-2337.23Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fasci... [more]
UBE2S_DROGR1.490e-2236.36Ubiquitin-conjugating enzyme E2 S OS=Drosophila gr... [more]
UBE2S_DROSI1.947e-2234.97Ubiquitin-conjugating enzyme E2 S OS=Drosophila si... [more]
UBE2S_DROSE1.947e-2234.97Ubiquitin-conjugating enzyme E2 S OS=Drosophila se... [more]
UBE2S_DROME1.947e-2234.97Ubiquitin-conjugating enzyme E2 S OS=Drosophila me... [more]
UBE2S_DROYA2.542e-2235.66Ubiquitin-conjugating enzyme E2 S OS=Drosophila ya... [more]
UBE2S_DROER2.542e-2235.66Ubiquitin-conjugating enzyme E2 S OS=Drosophila er... [more]
UBE2S_DROAN3.320e-2234.97Ubiquitin-conjugating enzyme E2 S OS=Drosophila an... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CE01FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257635 ID=DY257635; Name=DY257635; organism=Citrus sinensis; type=EST; length=669bp
ACGAGAAACCTAAAGAGGAAAAGAGGGAGAGGGAAAAAAAGACGATCGAT
TTCTGACTCATCTCTGTAAAATCTCTTGGAATTCCGATGGCTAGTGGCAA
CCTCCCTCGCAGAATTGTCAAGGAAACCCAGCGGCTGCTCAGTGAACCAG
CTCCAGGCATTAGTGCTTCTCCTGCCGAAGACAACATGCGATATTTTAAT
GTAATGATTCTTGGTCCATCTCAGTCTCCTTATGAAGGTGGGGTTTTCAA
GTTGGAGTTGTTTTTGCCTGAAGATTATCCAATGTCCGCTCCTAAGGTTC
GATTTCTGACCAAAATATATCATCCTAACATAGACAAGCTTGGAAGGATA
TGCCTTGATATTTTGAAAGATAAATGGAGTCCCGCCCTGCAAATCCGCAC
AGTCCTGCTGAGTATCCAAGCTCTTTTGAGTGCTCCGAACCCAGACGATC
CACTTTCTGATAACATTGCAAAGCATTGGAAGGCAGATGAGACTGAAGCT
GTTGAAACTGCGAAGGAATGGACCCGGTTATATGCAAGTGATGGGTGAAG
GCTAGAGCTTGTTCGAGGATATTTCTCTACAAGTTTATGTTAAAAACACT
AATTGATGTATGAACAGATGTGTAAAAATGTTTCTCAATCGGTCTGTTAT
TTGAATGTTCCACTTGTAT
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