DY257635

Overview
NameDY257635
Unique NameDY257635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 48/131 (36.64%), Postives = 79/131 (60.31%), Query Frame = 3
Query:  114 IVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKD--------KWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWK 482
            ++ E + L+  P+     S  EDN+  ++V++ GP  + YEGG+FK ++  P  YP   P++ F ++++HPNI   G++C+ IL           WSPA +I TVLLS+ +LL+ PNPD P + + AK ++
Sbjct:    6 LLAEYKNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYR 136          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  180 DNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            D M+ F V   GP  S YEGGV+K+ + LP+ YP  +P V F+TKIYHPN+D++ G +CLD++   WSP   +  V  + +  LL  PNP DPL+   A     D     +  KE+   YA
Sbjct:   27 DGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   93 SGNLPRRIVKETQRLLSEPAPGISASPA-EDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 518
            +G   +R++ E ++L   P  GI A P  E+N   +  +I+GP  + +E GVF   L  P DYP+S PK+RF  +++HPNI   GR+C+ IL              ++WSP   +  +LLS+ ++L+ PN +   + + +K W+ D  +  + AK+
Sbjct:    2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   93 SGNLPRRIVKETQRLLSEPAPGISASPA-EDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 518
            +G   +R++ E ++L   P  GI A P  E+N   +  +I+GP  + +E GVF   L  P DYP+S PK+RF  +++HPNI   GR+C+ IL              ++WSP   +  +LLS+ ++L+ PN +   + + +K W+ D  +  + AK+
Sbjct:    2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   93 SGNLPRRIVKETQRLLSEPAPGISASPA-EDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 518
            +G   +R++ E ++L   P  GI A P  E+N   +  +I+GP  + +E GVF   L  P DYP+S PK+RF  +++HPNI   GR+C+ IL              ++WSP   +  +LLS+ ++L+ PN +   + + +K W+ D  +  + AK+
Sbjct:    2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20
Identity = 47/133 (35.34%), Postives = 82/133 (61.65%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKD--------KWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWK 482
            R ++ E + L+  P+     S  E++M  ++V++ GP  + YEGG+FK ++  P +YP + P++ F ++++HPNI   G++C+ IL           WSPA +I T+LLS+ +LL+ PNPD P + + AK ++
Sbjct:    4 RFLMAEYRHLIENPSENFKISVNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYR 136          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC22_ARATH (Ubiquitin carrier protein E2 22 OS=Arabidopsis thaliana GN=UBC22 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20
Identity = 50/146 (34.25%), Postives = 82/146 (56.16%), Query Frame = 3
Query:   99 NLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 536
            N+ +++ KE + L   P  GI     +++       I GP  +PYE G+F+++L L  D+P S PK  F+TKI+HPN+   G IC++ LK  W+P+L +R VL  ++ LL  P P+  L++   K    +  E    A+ +T ++A
Sbjct:   10 NVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHA 155          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKD--------KWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWK 482
            R ++ E + L   P+     S  E+N+  ++V++ GPS + YEGG+FK ++  P +YP   PK+ F ++++HPNI   GR+C+ IL           WSPA +I TVLLS+ +L + PN D P + + AK ++
Sbjct:    4 RFLLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYR 136          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQ-IRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 539
            RRI  +  +LL             D+M+ F+V  LGP  +PYE GV++L + LP++YP  +P + F+ KI+HPNID   G ICLD++   WSP    I  V   I  LL  PN  DPL++  A     D+    E  KE+   YA+
Sbjct:    6 RRIETDVMKLLMSDH---QVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYAT 148          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 9.042e-20
Identity = 45/141 (31.91%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTR 527
            RR+ +E   L+      +    + D        +L P ++PY  G F++E+  P  YP   PK+ F TKIYHPN+D+ G +CL I+  D W P  +   VL ++ A++  P P+ PL  ++A+ +  +  + ++TA+E+T+
Sbjct:    5 RRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLVPEKAPYNKGAFRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKTAEEFTK 145          
The following BLAST results are available for this feature:
BLAST of DY257635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBC_ASFM23.108e-2036.64Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC5_ARATH3.108e-2041.32Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis t... [more]
UB2G2_PONAB3.108e-2032.69Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii... [more]
UB2G2_MOUSE3.108e-2032.69Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus... [more]
UB2G2_HUMAN3.108e-2032.69Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens... [more]
UBC_ASFWA4.059e-2035.34Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC22_ARATH4.059e-2034.25Ubiquitin carrier protein E2 22 OS=Arabidopsis tha... [more]
UBC_ASFK56.923e-2036.84Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC8_YEAST6.923e-2038.36Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharo... [more]
UBC84_DROME9.042e-2031.91Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CE01FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257635 ID=DY257635; Name=DY257635; organism=Citrus sinensis; type=EST; length=669bp
ACGAGAAACCTAAAGAGGAAAAGAGGGAGAGGGAAAAAAAGACGATCGAT
TTCTGACTCATCTCTGTAAAATCTCTTGGAATTCCGATGGCTAGTGGCAA
CCTCCCTCGCAGAATTGTCAAGGAAACCCAGCGGCTGCTCAGTGAACCAG
CTCCAGGCATTAGTGCTTCTCCTGCCGAAGACAACATGCGATATTTTAAT
GTAATGATTCTTGGTCCATCTCAGTCTCCTTATGAAGGTGGGGTTTTCAA
GTTGGAGTTGTTTTTGCCTGAAGATTATCCAATGTCCGCTCCTAAGGTTC
GATTTCTGACCAAAATATATCATCCTAACATAGACAAGCTTGGAAGGATA
TGCCTTGATATTTTGAAAGATAAATGGAGTCCCGCCCTGCAAATCCGCAC
AGTCCTGCTGAGTATCCAAGCTCTTTTGAGTGCTCCGAACCCAGACGATC
CACTTTCTGATAACATTGCAAAGCATTGGAAGGCAGATGAGACTGAAGCT
GTTGAAACTGCGAAGGAATGGACCCGGTTATATGCAAGTGATGGGTGAAG
GCTAGAGCTTGTTCGAGGATATTTCTCTACAAGTTTATGTTAAAAACACT
AATTGATGTATGAACAGATGTGTAAAAATGTTTCTCAATCGGTCTGTTAT
TTGAATGTTCCACTTGTAT
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