DY257635

Overview
NameDY257635
Unique NameDY257635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.010e-27
Identity = 60/135 (44.44%), Postives = 84/135 (62.22%), Query Frame = 3
Query:   96 GNLPRRIVKETQRLLSEPAPGISASPAEDN-MRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETE 497
            G + +R+  E  +LLS     ISA P +DN + Y+   I GP  +PY G  FK+ L  P++YP   P ++FL+ ++HPN+DK G ICLDILK+KWS    + T+LLS+Q+LL  PN   PL+   A+ W AD  E
Sbjct:    7 GCVTKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEE 141          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.428e-27
Identity = 50/137 (36.50%), Postives = 90/137 (65.69%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 518
            RR++++ +R+ ++P  G+SASP  DN+  +N +I+GP+ +P+E G F+L +   E YP   P V+F+++++HPN+   G +CLDIL+++WSP   +  +L SIQ+LL+ PN   P +   +  +K +  E ++  +E
Sbjct:    7 RRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRE 143          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.477e-27
Identity = 51/137 (37.23%), Postives = 91/137 (66.42%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 518
            RR++++ +R+ ++P  G+SASP  DN+  +N +I+GP+ +P+E G F+L +   E YP   P+V+F+++++HPN+   G +CLDIL+++WSP   +  VL SIQ+LL+ PN   P +   +  +K +  E ++  +E
Sbjct:    7 RRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVRE 143          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.477e-27
Identity = 51/137 (37.23%), Postives = 90/137 (65.69%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 518
            RR++++ +R+ ++P  G+SASP  DN+  +N +I+GP+ +P+E G F+L +   E YP   P+V+F+++++HPN+   G +CLDIL+++WSP   +  VL SIQ+LL+ PN   P +   +  +K +  E  +  +E
Sbjct:    7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRKEYTKRVRE 143          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.847e-27
Identity = 52/137 (37.96%), Postives = 90/137 (65.69%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 518
            RR++++ +R+  +P  G+SASP  DN+  +N +I+GPS +P+E G F+L L   E YP   P+V+F+++++HPN+   G +CLDIL+++WSP   + ++L S+Q+LL+ PN   P +   A  +K   +  V+  +E
Sbjct:    7 RRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRE 143          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27
Identity = 62/131 (47.33%), Postives = 82/131 (62.60%), Query Frame = 3
Query:   90 ASGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWK 482
            A G + +R+ +E   L++    GISA P  DN+  +   I G + + YE   +KL L  P  YP +AP V+FLT  YHPN+D  G ICLDILKDKWS    +RT+LLSIQ+LL  PN D PL+ + A+ WK
Sbjct:   27 ARGPVGKRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWK 157          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27
Identity = 62/131 (47.33%), Postives = 81/131 (61.83%), Query Frame = 3
Query:   90 ASGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWK 482
            A G + +R+ +E   L+     GISA P  DN+  +   I G + + YE   +KL L  P  YP +AP V+FLT  YHPN+D  G ICLDILKDKWS    +RT+LLSIQ+LL  PN D PL+ + A+ WK
Sbjct:   27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWK 157          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27
Identity = 62/131 (47.33%), Postives = 81/131 (61.83%), Query Frame = 3
Query:   90 ASGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWK 482
            A G + +R+ +E   L+     GISA P  DN+  +   I G + + YE   +KL L  P  YP +AP V+FLT  YHPN+D  G ICLDILKDKWS    +RT+LLSIQ+LL  PN D PL+ + A+ WK
Sbjct:   27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWK 157          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27
Identity = 49/137 (35.77%), Postives = 90/137 (65.69%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 518
            RR++++ +R+ ++P  G+SASP  DN+  +N +I+GP+ +P+E G F+L +   E YP   P V+F+++++HPN+   G +CLDIL+++WSP   +  +L SIQ+LL+ PN   P +   +  ++ +  E ++  +E
Sbjct:    7 RRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRE 143          
BLAST of DY257635 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27
Identity = 56/141 (39.72%), Postives = 89/141 (63.12%), Query Frame = 3
Query:  108 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRL 530
            RR++++ +RL S+   GIS SP  DN+  +N +I GP ++P+E G F+L L   + YP   P VRF++K++HPNI   G +CLDIL+++WSP   +  +L S+Q+LL+ PNP  P + + A+ +K +  E     K+   L
Sbjct:    7 RRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVKKTVEL 147          
The following BLAST results are available for this feature:
BLAST of DY257635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBC11_YEAST2.010e-2744.44Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharo... [more]
UBC2_ASPFU3.428e-2736.50Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_TRIHA4.477e-2737.23Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma h... [more]
UBC2_NECHA4.477e-2737.23Ubiquitin-conjugating enzyme E2 2 OS=Nectria haema... [more]
UBC2_CANAL5.847e-2737.96Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBE2C_MOUSE7.637e-2747.33Ubiquitin-conjugating enzyme E2 C OS=Mus musculus ... [more]
UBE2C_MACFA7.637e-2747.33Ubiquitin-conjugating enzyme E2 C OS=Macaca fascic... [more]
UBE2C_BOVIN7.637e-2747.33Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN... [more]
UBC2_EMENI7.637e-2735.77Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_CRYNE7.637e-2739.72Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CE01FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257635 ID=DY257635; Name=DY257635; organism=Citrus sinensis; type=EST; length=669bp
ACGAGAAACCTAAAGAGGAAAAGAGGGAGAGGGAAAAAAAGACGATCGAT
TTCTGACTCATCTCTGTAAAATCTCTTGGAATTCCGATGGCTAGTGGCAA
CCTCCCTCGCAGAATTGTCAAGGAAACCCAGCGGCTGCTCAGTGAACCAG
CTCCAGGCATTAGTGCTTCTCCTGCCGAAGACAACATGCGATATTTTAAT
GTAATGATTCTTGGTCCATCTCAGTCTCCTTATGAAGGTGGGGTTTTCAA
GTTGGAGTTGTTTTTGCCTGAAGATTATCCAATGTCCGCTCCTAAGGTTC
GATTTCTGACCAAAATATATCATCCTAACATAGACAAGCTTGGAAGGATA
TGCCTTGATATTTTGAAAGATAAATGGAGTCCCGCCCTGCAAATCCGCAC
AGTCCTGCTGAGTATCCAAGCTCTTTTGAGTGCTCCGAACCCAGACGATC
CACTTTCTGATAACATTGCAAAGCATTGGAAGGCAGATGAGACTGAAGCT
GTTGAAACTGCGAAGGAATGGACCCGGTTATATGCAAGTGATGGGTGAAG
GCTAGAGCTTGTTCGAGGATATTTCTCTACAAGTTTATGTTAAAAACACT
AATTGATGTATGAACAGATGTGTAAAAATGTTTCTCAATCGGTCTGTTAT
TTGAATGTTCCACTTGTAT
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