EY702515

Overview
NameEY702515
Unique NameEY702515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.273e-51
Identity = 89/126 (70.63%), Postives = 104/126 (82.54%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381
            +VQCM+VWPP G K +ETLSYLPPL+ E L KE+ YL+R GW+PCLEFELE G VYRE+H+SPGYYDGRYWTMWKLPM+GCTDA QVL+E+ E+ K YP  + RIIGFDN   VQCISF+A KP G
Sbjct:   56 RVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS_FLATR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Flaveria trinervia GN=RBCS PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.273e-51
Identity = 87/126 (69.05%), Postives = 106/126 (84.13%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381
            +VQCMKVWPP G KK+ETLSYLP L++  L KE+ YL+R  W+PCLEFELE G+VYRE+  SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN   VQC+SFIA+KP G
Sbjct:   47 RVQCMKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVSFIASKPTG 172
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.273e-51
Identity = 87/124 (70.16%), Postives = 104/124 (83.87%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375
            +VQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+  GW+PCLEFE   G+VYREH  +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN   VQCISFIA KP
Sbjct:   55 RVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 178
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 5.273e-51
Identity = 87/124 (70.16%), Postives = 104/124 (83.87%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375
            +VQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+  GW+PCLEFE   G+VYREH  +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN   VQCISFIA KP
Sbjct:   54 RVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 177
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS1_FLAPR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.273e-51
Identity = 88/126 (69.84%), Postives = 107/126 (84.92%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381
            +VQCMKVWPP G KK+ETLSYLP L++  L KE+ YL+R  W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN   VQCISFIA+KP G
Sbjct:   47 RVQCMKVWPPLGKKKYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPGG 172
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS3_FLAPR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Flaveria pringlei GN=RBCS3 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.887e-51
Identity = 87/126 (69.05%), Postives = 107/126 (84.92%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381
            +VQCMKVWPP G K++ETLSYLP L++  L KE+ YL+R  W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN   VQCISFIA+KP G
Sbjct:   47 RVQCMKVWPPLGKKRYETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS2_FLAPR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Flaveria pringlei GN=RBCS2 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.995e-51
Identity = 87/126 (69.05%), Postives = 107/126 (84.92%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381
            +VQCMKVWPP G K++ETLSYLP L++  L KE+ YL+R  W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN   VQCISFIA+KP G
Sbjct:   52 RVQCMKVWPPLGKKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPEG 177
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS7_FLAPR (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.175e-50
Identity = 87/126 (69.05%), Postives = 107/126 (84.92%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381
            +VQCMKVWPP G K++ETLSYLP L++  L KE+ YL+R  W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN   VQCISFIA+KP G
Sbjct:   47 RVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS5_FLAPR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Flaveria pringlei GN=RBCS5 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.175e-50
Identity = 87/126 (69.05%), Postives = 107/126 (84.92%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKPPG 381
            +VQCMKVWPP G K++ETLSYLP L++  L KE+ YL+R  W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN   VQCISFIA+KP G
Sbjct:   47 RVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
[Close]
BLAST of EY702515 vs. ExPASy Swiss-Prot
Match: RBS2_MESCR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-2 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.175e-50
Identity = 87/124 (70.16%), Postives = 103/124 (83.06%), Query Frame = 1 
Query:    4 KVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEIHYLIRAGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNGAAVQCISFIAAKP 375
            +VQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+  GW+PCLEFE   G+VYREH  +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F RIIGFDN   VQCISFIA KP
Sbjct:   52 RVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRIIGFDNVRQVQCISFIAYKP 175
The following BLAST results are available for this feature:
BLAST of EY702515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
RBS_HEVBR5.273e-5170.63Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_FLATR5.273e-5169.05Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS3_MESCR5.273e-5170.16Ribulose bisphosphate carboxylase small chain 3, c... [more]
RBS1_MESCR5.273e-5170.16Ribulose bisphosphate carboxylase small chain 1, c... [more]
RBS1_FLAPR5.273e-5169.84Ribulose bisphosphate carboxylase small chain 1, c... [more]
RBS3_FLAPR6.887e-5169.05Ribulose bisphosphate carboxylase small chain 3, c... [more]
RBS2_FLAPR8.995e-5169.05Ribulose bisphosphate carboxylase small chain 2, c... [more]
RBS7_FLAPR1.175e-5069.05Ribulose bisphosphate carboxylase small chain 7, c... [more]
RBS5_FLAPR1.175e-5069.05Ribulose bisphosphate carboxylase small chain 5, c... [more]
RBS2_MESCR1.175e-5070.16Ribulose bisphosphate carboxylase small chain 2, c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702515 ID=EY702515; Name=EY702515; organism=Citrus sinensis; type=EST; length=861bp
CGGAAAGTCCAATGCATGAAGGTGTGGCCACCAACTGGCTTGAAGAAGTT
CGAGACTCTCTCATACCTCCCGCCACTGTCCGATGAAGCTTTGCTCAAGG
AAATCCATTACCTTATCCGGGCCGGGTGGATTCCCTGCTTGGAATTCGAG
TTGGAGAAAGGATGGGTGTACCGTGAGCACCACAAGTCACCAGGATACTA
CGATGGACGCTACTGGACAATGTGGAAGCTGCCCATGTATGGGTGCACAG
ATGCAACCCAGGTTCTGAAGGAGGTTGGGGAGGTCCAGAAGGAATACCCA
CATTCATTCGTCCGAATTATCGGATTTGACAACGGGGCGGCGGTGCAGTG
CATCAGTTTCATTGCTGCCAAGCCACCAGGCGTCTAGGTTCCCAATTAAA
TTTGTGTAACCACCCATGCAATATTGTTGATTATTATTATGTGTAACCCC
CATAATGATCATTCGACCAATGGGCGTTCGGTTTGCGTTTAATTTGTACT
TAGGCTGCTGTTGCTGCTGCTCAAACTTTTTTGGGTTTCTCCCACGCGGG
CCGCGGACGCCGCGGCCCCAGGGTCCAAGGAGCCCCCCTCCGCCCGCCCG
CCCCCGCCGCCCCCTCCCCCACGTCGGCCGCGGCTGGGGGCGCCTGCGGC
CGACACCAGAGGGGGGGGCCCCCGAGAGGCGCCAGGCTTACGCCCCGGGG
GGGGCCGCGCGCGCCCTTCTCGGGGGCCGCCCAACACCGTTCCCGGGGCC
GGGGTTTCACCCTGGGGGGGCGGAAACCCGGGGTTTGCCCTTTTAGGCGT
GGGGAGTTCCCGCTTCGCCGGGGGGGGAATAAAAAAGGCGCCCCTCCGCC
CCCTCCGCTGT
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